Experiment: Anaero. lactate (C), nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0675 and Dsui_0676 are separated by 77 nucleotides Dsui_0676 and Dsui_0677 overlap by 4 nucleotides Dsui_0677 and Dsui_0678 are separated by 129 nucleotides Dsui_0678 and Dsui_0679 are separated by 2 nucleotides
Dsui_0675: Dsui_0675 - putative dithiol-disulfide isomerase involved in polyketide biosynthesis, at 674,307 to 674,966
_0675
Dsui_0676: Dsui_0676 - short-chain dehydrogenase of unknown substrate specificity, at 675,044 to 675,817
_0676
Dsui_0677: Dsui_0677 - hypothetical protein, at 675,814 to 676,635
_0677
Dsui_0678: Dsui_0678 - hypothetical protein, at 676,765 to 677,121
_0678
Dsui_0679: Dsui_0679 - uncharacterized protein SCO1/SenC/PrrC, at 677,124 to 677,798
_0679
Position (kb) 675
676
677 Strain fitness (log2 ratio) -2
-1
0
1
2 at 674.878 kb on - strand at 674.884 kb on - strand at 674.906 kb on + strand at 675.059 kb on - strand at 675.060 kb on - strand at 675.067 kb on - strand at 675.067 kb on - strand at 675.137 kb on - strand at 675.559 kb on - strand, within Dsui_0676 at 675.618 kb on + strand, within Dsui_0676 at 675.627 kb on - strand, within Dsui_0676 at 675.760 kb on + strand at 675.780 kb on + strand at 675.784 kb on + strand at 675.788 kb on - strand at 676.016 kb on + strand, within Dsui_0677 at 676.258 kb on + strand at 676.280 kb on + strand, within Dsui_0677 at 676.280 kb on - strand, within Dsui_0677 at 676.302 kb on - strand, within Dsui_0677 at 676.620 kb on + strand at 676.645 kb on - strand at 676.715 kb on + strand at 676.723 kb on - strand at 676.723 kb on - strand at 676.772 kb on + strand at 676.772 kb on + strand at 676.772 kb on + strand at 676.780 kb on - strand at 676.780 kb on - strand at 676.780 kb on - strand at 676.861 kb on - strand, within Dsui_0678 at 676.875 kb on - strand, within Dsui_0678 at 676.891 kb on + strand, within Dsui_0678 at 676.899 kb on - strand, within Dsui_0678 at 676.934 kb on - strand, within Dsui_0678 at 677.042 kb on + strand, within Dsui_0678 at 677.291 kb on + strand, within Dsui_0679 at 677.377 kb on + strand, within Dsui_0679 at 677.404 kb on + strand, within Dsui_0679 at 677.412 kb on - strand, within Dsui_0679 at 677.468 kb on + strand, within Dsui_0679 at 677.492 kb on - strand, within Dsui_0679 at 677.529 kb on - strand, within Dsui_0679 at 677.610 kb on + strand, within Dsui_0679 at 677.623 kb on - strand, within Dsui_0679
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), nitrate electron acceptor remove 674,878 - +0.9 674,884 - -0.1 674,906 + -1.1 675,059 - -0.0 675,060 - -0.6 675,067 - -0.1 675,067 - -0.8 675,137 - -0.1 675,559 - Dsui_0676 0.67 -0.2 675,618 + Dsui_0676 0.74 -0.4 675,627 - Dsui_0676 0.75 -0.2 675,760 + -2.1 675,780 + +1.3 675,784 + +0.9 675,788 - +1.3 676,016 + Dsui_0677 0.25 -0.2 676,258 + +2.3 676,280 + Dsui_0677 0.57 -0.9 676,280 - Dsui_0677 0.57 +0.5 676,302 - Dsui_0677 0.59 -0.1 676,620 + -1.1 676,645 - -0.2 676,715 + +1.9 676,723 - +0.4 676,723 - +0.9 676,772 + +0.3 676,772 + -0.5 676,772 + +0.3 676,780 - +0.1 676,780 - -0.0 676,780 - +0.9 676,861 - Dsui_0678 0.27 -0.2 676,875 - Dsui_0678 0.31 -0.5 676,891 + Dsui_0678 0.35 +0.6 676,899 - Dsui_0678 0.38 +0.1 676,934 - Dsui_0678 0.47 -1.5 677,042 + Dsui_0678 0.78 -0.8 677,291 + Dsui_0679 0.25 -0.4 677,377 + Dsui_0679 0.37 -1.1 677,404 + Dsui_0679 0.41 -1.0 677,412 - Dsui_0679 0.43 -0.9 677,468 + Dsui_0679 0.51 -0.3 677,492 - Dsui_0679 0.55 -1.0 677,529 - Dsui_0679 0.60 -0.3 677,610 + Dsui_0679 0.72 -1.3 677,623 - Dsui_0679 0.74 -1.5
Or see this region's nucleotide sequence