Experiment: Anaero. lactate (C), nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0491 and Dsui_0492 are separated by 144 nucleotides Dsui_0492 and Dsui_0493 are separated by 5 nucleotides Dsui_0493 and Dsui_0494 are separated by 13 nucleotides Dsui_0494 and Dsui_0495 are separated by 9 nucleotides
Dsui_0491: Dsui_0491 - putative oxygen-independent coproporphyrinogen III oxidase, at 493,858 to 495,096
_0491
Dsui_0492: Dsui_0492 - non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family, at 495,241 to 495,831
_0492
Dsui_0493: Dsui_0493 - hypothetical protein, at 495,837 to 496,745
_0493
Dsui_0494: Dsui_0494 - ribonuclease PH, at 496,759 to 497,475
_0494
Dsui_0495: Dsui_0495 - serine/threonine protein phosphatase, at 497,485 to 498,396
_0495
Position (kb) 495
496
497 Strain fitness (log2 ratio) -2
-1
0
1 at 494.855 kb on - strand, within Dsui_0491 at 494.923 kb on + strand, within Dsui_0491 at 494.980 kb on + strand at 495.155 kb on + strand at 495.202 kb on - strand at 495.238 kb on + strand at 495.487 kb on - strand, within Dsui_0492 at 495.598 kb on + strand, within Dsui_0492 at 495.765 kb on - strand, within Dsui_0492 at 495.772 kb on - strand, within Dsui_0492 at 495.772 kb on - strand, within Dsui_0492 at 495.775 kb on + strand at 495.808 kb on - strand at 495.828 kb on + strand at 495.833 kb on + strand at 495.833 kb on + strand at 495.833 kb on + strand at 495.841 kb on - strand at 495.841 kb on - strand at 496.081 kb on - strand, within Dsui_0493 at 496.255 kb on + strand, within Dsui_0493 at 496.277 kb on + strand, within Dsui_0493 at 496.526 kb on - strand, within Dsui_0493 at 496.639 kb on + strand, within Dsui_0493 at 496.647 kb on - strand, within Dsui_0493 at 496.668 kb on - strand at 496.878 kb on - strand, within Dsui_0494 at 497.152 kb on + strand, within Dsui_0494 at 497.159 kb on - strand, within Dsui_0494 at 497.244 kb on - strand, within Dsui_0494 at 497.270 kb on + strand, within Dsui_0494 at 497.305 kb on + strand, within Dsui_0494 at 497.357 kb on + strand, within Dsui_0494 at 497.357 kb on + strand, within Dsui_0494 at 497.359 kb on + strand, within Dsui_0494 at 497.359 kb on + strand, within Dsui_0494 at 497.365 kb on - strand, within Dsui_0494 at 497.365 kb on - strand, within Dsui_0494 at 497.392 kb on + strand, within Dsui_0494 at 497.567 kb on + strand at 497.662 kb on - strand, within Dsui_0495 at 497.662 kb on - strand, within Dsui_0495
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), nitrate electron acceptor remove 494,855 - Dsui_0491 0.80 +0.5 494,923 + Dsui_0491 0.86 -1.9 494,980 + -0.3 495,155 + +0.4 495,202 - -0.1 495,238 + -0.7 495,487 - Dsui_0492 0.42 +0.3 495,598 + Dsui_0492 0.60 -0.7 495,765 - Dsui_0492 0.89 -0.9 495,772 - Dsui_0492 0.90 +0.7 495,772 - Dsui_0492 0.90 -1.2 495,775 + -0.8 495,808 - -0.1 495,828 + -0.5 495,833 + -0.2 495,833 + +0.9 495,833 + +0.1 495,841 - -0.1 495,841 - +0.0 496,081 - Dsui_0493 0.27 -0.1 496,255 + Dsui_0493 0.46 +0.7 496,277 + Dsui_0493 0.48 +0.5 496,526 - Dsui_0493 0.76 -1.1 496,639 + Dsui_0493 0.88 -0.1 496,647 - Dsui_0493 0.89 +0.5 496,668 - -0.1 496,878 - Dsui_0494 0.17 -0.2 497,152 + Dsui_0494 0.55 +0.9 497,159 - Dsui_0494 0.56 -0.1 497,244 - Dsui_0494 0.68 +0.6 497,270 + Dsui_0494 0.71 +0.9 497,305 + Dsui_0494 0.76 +0.5 497,357 + Dsui_0494 0.83 -0.2 497,357 + Dsui_0494 0.83 -0.8 497,359 + Dsui_0494 0.84 +0.3 497,359 + Dsui_0494 0.84 +0.1 497,365 - Dsui_0494 0.85 +1.4 497,365 - Dsui_0494 0.85 -0.3 497,392 + Dsui_0494 0.88 -0.3 497,567 + +0.4 497,662 - Dsui_0495 0.19 +0.2 497,662 - Dsui_0495 0.19 +0.0
Or see this region's nucleotide sequence