Experiment: Anaero. lactate (C), nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0191 and Dsui_0192 are separated by 183 nucleotides Dsui_0192 and Dsui_0193 overlap by 20 nucleotides Dsui_0193 and Dsui_0194 overlap by 29 nucleotides
Dsui_0191: Dsui_0191 - hypothetical protein, at 190,613 to 191,242
_0191
Dsui_0192: Dsui_0192 - hypothetical protein, at 191,426 to 191,869
_0192
Dsui_0193: Dsui_0193 - putative phage protein, putative large terminase, at 191,850 to 193,328
_0193
Dsui_0194: Dsui_0194 - phage putative head morphogenesis protein, SPP1 gp7 family, at 193,300 to 196,020
_0194
Position (kb)
191
192
193
194 Strain fitness (log2 ratio)
-2
-1
0
1 at 190.882 kb on - strand at 191.026 kb on - strand, within Dsui_0191 at 191.136 kb on - strand, within Dsui_0191 at 191.285 kb on - strand at 191.540 kb on + strand, within Dsui_0192 at 191.575 kb on - strand, within Dsui_0192 at 191.675 kb on + strand, within Dsui_0192 at 191.675 kb on + strand, within Dsui_0192 at 191.750 kb on - strand at 191.796 kb on + strand at 191.945 kb on + strand at 191.992 kb on - strand at 192.011 kb on + strand, within Dsui_0193 at 192.011 kb on + strand, within Dsui_0193 at 192.019 kb on - strand, within Dsui_0193 at 192.023 kb on + strand, within Dsui_0193 at 192.058 kb on + strand, within Dsui_0193 at 192.374 kb on + strand, within Dsui_0193 at 192.543 kb on + strand, within Dsui_0193 at 192.611 kb on + strand, within Dsui_0193 at 192.611 kb on + strand, within Dsui_0193 at 192.626 kb on + strand, within Dsui_0193 at 192.812 kb on + strand, within Dsui_0193 at 192.834 kb on - strand, within Dsui_0193 at 192.837 kb on + strand, within Dsui_0193 at 192.953 kb on + strand, within Dsui_0193 at 193.032 kb on - strand, within Dsui_0193 at 193.036 kb on + strand, within Dsui_0193 at 193.071 kb on + strand, within Dsui_0193 at 193.123 kb on - strand, within Dsui_0193 at 193.225 kb on - strand at 193.397 kb on - strand at 193.707 kb on + strand, within Dsui_0194 at 193.707 kb on + strand, within Dsui_0194 at 193.726 kb on + strand at 193.734 kb on - strand, within Dsui_0194 at 193.856 kb on + strand, within Dsui_0194 at 193.927 kb on - strand, within Dsui_0194 at 193.974 kb on - strand, within Dsui_0194 at 194.118 kb on + strand, within Dsui_0194 at 194.138 kb on + strand, within Dsui_0194 at 194.138 kb on - strand, within Dsui_0194 at 194.146 kb on - strand, within Dsui_0194 at 194.169 kb on - strand, within Dsui_0194 at 194.235 kb on - strand, within Dsui_0194
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), nitrate electron acceptor remove 190,882 - -0.3 191,026 - Dsui_0191 0.66 +0.4 191,136 - Dsui_0191 0.83 +0.5 191,285 - -0.6 191,540 + Dsui_0192 0.26 -1.1 191,575 - Dsui_0192 0.34 -0.4 191,675 + Dsui_0192 0.56 -1.3 191,675 + Dsui_0192 0.56 -0.6 191,750 - +0.4 191,796 + -0.3 191,945 + -0.5 191,992 - -0.3 192,011 + Dsui_0193 0.11 -0.4 192,011 + Dsui_0193 0.11 +1.2 192,019 - Dsui_0193 0.11 -0.9 192,023 + Dsui_0193 0.12 -0.2 192,058 + Dsui_0193 0.14 -1.8 192,374 + Dsui_0193 0.35 -0.1 192,543 + Dsui_0193 0.47 -0.8 192,611 + Dsui_0193 0.51 -0.2 192,611 + Dsui_0193 0.51 +1.3 192,626 + Dsui_0193 0.52 -0.8 192,812 + Dsui_0193 0.65 -0.3 192,834 - Dsui_0193 0.67 -0.9 192,837 + Dsui_0193 0.67 -2.3 192,953 + Dsui_0193 0.75 -0.7 193,032 - Dsui_0193 0.80 -0.8 193,036 + Dsui_0193 0.80 -0.6 193,071 + Dsui_0193 0.83 -2.1 193,123 - Dsui_0193 0.86 -0.7 193,225 - -0.7 193,397 - +0.2 193,707 + Dsui_0194 0.15 -0.1 193,707 + Dsui_0194 0.15 -0.3 193,726 + +0.4 193,734 - Dsui_0194 0.16 -0.7 193,856 + Dsui_0194 0.20 -0.3 193,927 - Dsui_0194 0.23 -0.6 193,974 - Dsui_0194 0.25 +0.0 194,118 + Dsui_0194 0.30 -1.2 194,138 + Dsui_0194 0.31 -0.1 194,138 - Dsui_0194 0.31 +0.4 194,146 - Dsui_0194 0.31 -1.1 194,169 - Dsui_0194 0.32 +0.2 194,235 - Dsui_0194 0.34 -1.0
Or see this region's nucleotide sequence