Strain Fitness in Shewanella oneidensis MR-1 around SO3004

Experiment: Benzalkonium Chloride 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.002 mg/ml
3,119,463	-		SO3002	0.37	-0.4
3,119,611	+		SO3002	0.59	+0.3
3,119,672	+		SO3002	0.68	+0.3
3,119,672	+		SO3002	0.68	-0.1
3,119,682	+		SO3002	0.69	-0.3
3,119,762	-		SO3002	0.81	-0.0
3,120,042	+		SO3003	0.45	+0.7
3,120,069	+		SO3003	0.53	+0.6
3,120,077	-		SO3003	0.55	-0.4
3,120,242	-				+0.3
3,120,328	-		SO3004	0.10	-0.4
3,120,411	+		SO3004	0.19	-0.0
3,120,419	-		SO3004	0.20	+0.1
3,120,421	+		SO3004	0.20	+0.5
3,120,456	+		SO3004	0.23	-0.2
3,120,490	+		SO3004	0.27	-1.3
3,120,524	+		SO3004	0.31	+0.6
3,120,555	+		SO3004	0.34	+0.1
3,120,563	-		SO3004	0.35	-1.0
3,120,563	-		SO3004	0.35	+0.7
3,120,671	+		SO3004	0.46	+1.4
3,120,671	+		SO3004	0.46	+0.1
3,120,679	-		SO3004	0.47	-0.1
3,120,679	-		SO3004	0.47	-0.1
3,120,679	-		SO3004	0.47	-0.6
3,120,690	+		SO3004	0.48	+0.2
3,120,698	-		SO3004	0.49	+0.9
3,120,738	-		SO3004	0.53	+0.2
3,120,818	+		SO3004	0.61	-0.3
3,120,885	-		SO3004	0.68	-0.0
3,120,986	-		SO3004	0.78	-0.9
3,120,986	-		SO3004	0.78	-0.5
3,120,988	+		SO3004	0.79	-0.4
3,120,996	-		SO3004	0.79	+0.0
3,120,996	-		SO3004	0.79	+0.3
3,121,107	-				+0.1
3,121,222	-				+0.3
3,121,239	+				+0.7
3,121,378	-		SO3005	0.38	+0.3
3,121,413	+		SO3005	0.45	+0.0
3,121,431	-		SO3005	0.48	-0.1
3,121,451	-		SO3005	0.52	-0.0
3,121,480	-		SO3005	0.58	+0.1
3,121,481	-		SO3005	0.58	+0.4
3,121,557	-		SO3005	0.73	-0.3
3,121,557	-		SO3005	0.73	+0.4
3,121,582	+		SO3005	0.79	-0.4
3,121,590	-		SO3005	0.80	-0.3
3,121,749	-				-0.3
3,121,799	+				+0.2
3,121,807	-				+0.3
3,121,865	+		SO3006	0.11	-0.6
3,121,873	-		SO3006	0.11	+0.6
3,121,887	-		SO3006	0.12	+0.4
3,121,888	-		SO3006	0.12	-0.2
3,121,905	-		SO3006	0.13	-0.6
3,121,933	+		SO3006	0.15	+1.2
3,121,933	+		SO3006	0.15	+0.5
3,121,933	+		SO3006	0.15	-0.1
3,122,005	-		SO3006	0.19	+0.1
3,122,018	-		SO3006	0.20	-0.4
3,122,095	+		SO3006	0.24	+0.3