Experiment: Parabanic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3293 and Psest_3294 are separated by 11 nucleotides Psest_3294 and Psest_3295 are separated by 185 nucleotides
Psest_3293: Psest_3293 - sulfate adenylyltransferase, large subunit, at 3,459,051 to 3,460,949
_3293
Psest_3294: Psest_3294 - sulfate adenylyltransferase, small subunit, at 3,460,961 to 3,461,878
_3294
Psest_3295: Psest_3295 - dinuclear metal center protein, YbgI/SA1388 family, at 3,462,064 to 3,462,822
_3295
Position (kb)
3460
3461
3462 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3460.963 kb on - strand at 3460.963 kb on - strand at 3460.963 kb on - strand at 3460.963 kb on - strand at 3461.936 kb on - strand at 3461.936 kb on - strand at 3461.946 kb on + strand at 3461.947 kb on - strand at 3461.947 kb on - strand at 3461.954 kb on - strand at 3461.976 kb on - strand at 3461.990 kb on + strand at 3462.023 kb on + strand at 3462.023 kb on + strand at 3462.023 kb on + strand at 3462.023 kb on + strand at 3462.024 kb on - strand at 3462.024 kb on - strand at 3462.024 kb on - strand at 3462.039 kb on + strand at 3462.075 kb on + strand at 3462.122 kb on + strand at 3462.122 kb on + strand at 3462.224 kb on - strand, within Psest_3295 at 3462.276 kb on - strand, within Psest_3295 at 3462.305 kb on - strand, within Psest_3295 at 3462.353 kb on - strand, within Psest_3295 at 3462.495 kb on + strand, within Psest_3295 at 3462.637 kb on + strand, within Psest_3295 at 3462.637 kb on + strand, within Psest_3295 at 3462.713 kb on - strand, within Psest_3295 at 3462.752 kb on + strand at 3462.752 kb on + strand at 3462.752 kb on + strand at 3462.808 kb on - strand at 3462.828 kb on + strand at 3462.829 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Parabanic Acid (N) remove 3,460,963 - +1.7 3,460,963 - +0.5 3,460,963 - -0.0 3,460,963 - +2.4 3,461,936 - +0.4 3,461,936 - -0.6 3,461,946 + +0.2 3,461,947 - -0.7 3,461,947 - -1.6 3,461,954 - -1.4 3,461,976 - +0.4 3,461,990 + -2.6 3,462,023 + +0.5 3,462,023 + +0.3 3,462,023 + -0.6 3,462,023 + -1.3 3,462,024 - -0.3 3,462,024 - -0.5 3,462,024 - +0.0 3,462,039 + +0.3 3,462,075 + -0.5 3,462,122 + -1.3 3,462,122 + -1.5 3,462,224 - Psest_3295 0.21 -0.4 3,462,276 - Psest_3295 0.28 -1.4 3,462,305 - Psest_3295 0.32 -1.3 3,462,353 - Psest_3295 0.38 -2.3 3,462,495 + Psest_3295 0.57 -1.6 3,462,637 + Psest_3295 0.75 -1.3 3,462,637 + Psest_3295 0.75 +0.2 3,462,713 - Psest_3295 0.86 +1.5 3,462,752 + -0.2 3,462,752 + +0.4 3,462,752 + -0.4 3,462,808 - +0.6 3,462,828 + -1.2 3,462,829 - -1.8
Or see this region's nucleotide sequence