Experiment: Anaero. lactate (C), nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0582 and Dsui_0583 are separated by 76 nucleotides Dsui_0583 and Dsui_0584 overlap by 4 nucleotides Dsui_0584 and Dsui_0585 are separated by 7 nucleotides
Dsui_0582: Dsui_0582 - anti-anti-sigma regulatory factor (antagonist of anti-sigma factor), at 579,788 to 581,017
_0582
Dsui_0583: Dsui_0583 - ABC-type Mn2+/Zn2+ transport system, permease component, at 581,094 to 581,912
_0583
Dsui_0584: Dsui_0584 - ATPase component of Mn/Zn ABC-type transporter, at 581,909 to 582,502
_0584
Dsui_0585: Dsui_0585 - ABC-type metal ion transport system, periplasmic component/surface adhesin, at 582,510 to 583,403
_0585
Position (kb) 581
582 Strain fitness (log2 ratio) -2
-1
0
1
2 at 580.134 kb on - strand, within Dsui_0582 at 580.168 kb on - strand, within Dsui_0582 at 580.389 kb on + strand at 580.389 kb on + strand at 580.397 kb on - strand, within Dsui_0582 at 580.590 kb on - strand, within Dsui_0582 at 580.746 kb on - strand, within Dsui_0582 at 580.758 kb on + strand at 580.767 kb on - strand, within Dsui_0582 at 580.875 kb on + strand, within Dsui_0582 at 580.883 kb on - strand, within Dsui_0582 at 580.975 kb on + strand at 580.984 kb on - strand at 580.992 kb on - strand at 581.053 kb on + strand at 581.061 kb on - strand at 581.067 kb on + strand at 581.069 kb on - strand at 581.168 kb on + strand at 581.171 kb on - strand at 581.196 kb on - strand, within Dsui_0583 at 581.320 kb on - strand, within Dsui_0583 at 581.390 kb on - strand, within Dsui_0583 at 581.417 kb on - strand, within Dsui_0583 at 581.469 kb on + strand at 581.555 kb on - strand, within Dsui_0583 at 581.609 kb on + strand at 581.744 kb on - strand, within Dsui_0583 at 581.827 kb on - strand, within Dsui_0583 at 581.921 kb on - strand at 581.984 kb on - strand at 582.372 kb on + strand, within Dsui_0584 at 582.406 kb on + strand, within Dsui_0584 at 582.451 kb on - strand at 582.481 kb on - strand at 582.485 kb on + strand at 582.516 kb on - strand at 582.531 kb on - strand at 582.570 kb on + strand at 582.688 kb on + strand at 582.781 kb on - strand at 582.835 kb on + strand, within Dsui_0585 at 582.835 kb on + strand, within Dsui_0585 at 582.858 kb on - strand, within Dsui_0585
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), nitrate electron acceptor remove 580,134 - Dsui_0582 0.28 -0.1 580,168 - Dsui_0582 0.31 +1.2 580,389 + +0.8 580,389 + -0.5 580,397 - Dsui_0582 0.50 +0.3 580,590 - Dsui_0582 0.65 -0.2 580,746 - Dsui_0582 0.78 -0.6 580,758 + +1.5 580,767 - Dsui_0582 0.80 +0.1 580,875 + Dsui_0582 0.88 -0.0 580,883 - Dsui_0582 0.89 +0.2 580,975 + -0.0 580,984 - -0.8 580,992 - +0.5 581,053 + +1.3 581,061 - +0.5 581,067 + -1.3 581,069 - -0.5 581,168 + +1.0 581,171 - -0.2 581,196 - Dsui_0583 0.12 +2.1 581,320 - Dsui_0583 0.28 +0.0 581,390 - Dsui_0583 0.36 +0.4 581,417 - Dsui_0583 0.39 +1.1 581,469 + -0.8 581,555 - Dsui_0583 0.56 -1.0 581,609 + -0.5 581,744 - Dsui_0583 0.79 +0.5 581,827 - Dsui_0583 0.89 +1.9 581,921 - -0.8 581,984 - -0.5 582,372 + Dsui_0584 0.78 +0.3 582,406 + Dsui_0584 0.84 -1.9 582,451 - +0.4 582,481 - +1.1 582,485 + +0.8 582,516 - +0.0 582,531 - +0.2 582,570 + +0.1 582,688 + +2.5 582,781 - +0.5 582,835 + Dsui_0585 0.36 -0.0 582,835 + Dsui_0585 0.36 -0.3 582,858 - Dsui_0585 0.39 -0.8
Or see this region's nucleotide sequence