Strain Fitness in Shewanella amazonensis SB2B around Sama_1077

Experiment: Gelatin

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gelatin
1,303,239	+		Sama_1076	0.20	-0.2
1,303,280	+		Sama_1076	0.24	-0.5
1,303,374	+		Sama_1076	0.34	-0.7
1,303,380	+		Sama_1076	0.35	-0.9
1,303,380	+		Sama_1076	0.35	-1.4
1,303,380	+		Sama_1076	0.35	-1.0
1,303,380	+		Sama_1076	0.35	-1.2
1,303,380	+		Sama_1076	0.35	-0.9
1,303,380	+		Sama_1076	0.35	-2.8
1,303,380	+		Sama_1076	0.35	-0.6
1,303,402	+		Sama_1076	0.37	-2.3
1,303,490	+		Sama_1076	0.46	-1.2
1,303,496	+		Sama_1076	0.47	-2.0
1,303,496	+		Sama_1076	0.47	-1.6
1,303,496	+		Sama_1076	0.47	-0.9
1,303,575	+		Sama_1076	0.55	-0.6
1,303,583	+		Sama_1076	0.55	-2.2
1,303,583	+		Sama_1076	0.55	-1.2
1,303,583	+		Sama_1076	0.55	-0.6
1,303,598	+		Sama_1076	0.57	-0.6
1,303,602	+		Sama_1076	0.57	-1.4
1,303,602	+		Sama_1076	0.57	-0.7
1,303,734	+		Sama_1076	0.71	-1.2
1,303,820	+		Sama_1076	0.80	-2.8
1,303,820	+		Sama_1076	0.80	-1.2
1,303,824	+		Sama_1076	0.80	-0.2
1,303,824	+		Sama_1076	0.80	-1.2
1,303,824	+		Sama_1076	0.80	-3.0
1,303,845	+		Sama_1076	0.82	-1.3
1,303,845	+		Sama_1076	0.82	-2.9
1,303,845	+		Sama_1076	0.82	-0.7
1,303,845	+		Sama_1076	0.82	-0.5
1,303,845	+		Sama_1076	0.82	-1.0
1,303,845	+		Sama_1076	0.82	-2.2
1,303,845	+		Sama_1076	0.82	-1.2
1,303,851	+		Sama_1076	0.83	-1.9
1,303,851	+		Sama_1076	0.83	-1.6
1,303,851	+		Sama_1076	0.83	-0.9
1,303,851	+		Sama_1076	0.83	-0.3
1,303,908	+		Sama_1076	0.89	-2.0
1,303,908	+		Sama_1076	0.89	-2.4
1,303,908	+		Sama_1076	0.89	-1.2
1,303,975	+				-1.0
1,303,975	+				+0.1
1,303,975	+				+0.9
1,303,976	-				+0.5
1,304,014	-				+0.4
1,304,137	+				+0.5
1,304,137	+				+1.4
1,304,137	+				-0.1
1,304,137	+				-0.6
1,304,138	-				+1.0
1,304,138	-				+0.8
1,304,138	-				-0.5
1,304,138	-				-0.4
1,304,203	+				+1.4
1,304,296	+		Sama_1077	0.11	+0.7
1,304,296	+		Sama_1077	0.11	+0.6
1,304,297	-		Sama_1077	0.11	+1.8
1,304,392	+		Sama_1077	0.21	-0.7
1,304,392	+		Sama_1077	0.21	-0.9
1,304,393	-		Sama_1077	0.22	+0.2
1,304,393	-		Sama_1077	0.22	-1.2
1,304,393	-		Sama_1077	0.22	-0.6
1,304,410	-		Sama_1077	0.23	+0.3
1,304,451	+		Sama_1077	0.28	-0.2
1,304,451	+		Sama_1077	0.28	-0.3
1,304,451	+		Sama_1077	0.28	-0.2
1,304,451	+		Sama_1077	0.28	+1.2
1,304,451	+		Sama_1077	0.28	+0.2
1,304,452	-		Sama_1077	0.28	-0.4
1,304,538	+		Sama_1077	0.38	-0.0
1,304,539	-		Sama_1077	0.38	-0.4
1,304,649	+		Sama_1077	0.50	+0.9
1,304,673	+		Sama_1077	0.52	-0.9
1,304,673	+		Sama_1077	0.52	-0.1
1,304,674	-		Sama_1077	0.53	-0.9
1,304,674	-		Sama_1077	0.53	-0.3
1,304,682	+		Sama_1077	0.53	+0.9
1,304,682	+		Sama_1077	0.53	-1.2
1,304,682	+		Sama_1077	0.53	-0.5
1,304,682	+		Sama_1077	0.53	+0.6
1,304,682	+		Sama_1077	0.53	-0.6
1,304,682	+		Sama_1077	0.53	+0.8
1,304,682	+		Sama_1077	0.53	+0.1
1,304,682	+		Sama_1077	0.53	-0.9
1,304,682	+		Sama_1077	0.53	+0.0
1,304,682	+		Sama_1077	0.53	+0.3
1,304,683	-		Sama_1077	0.54	-0.6
1,304,683	-		Sama_1077	0.54	-0.7
1,304,683	-		Sama_1077	0.54	-0.3
1,304,683	-		Sama_1077	0.54	-0.1
1,304,683	-		Sama_1077	0.54	+0.7
1,304,683	-		Sama_1077	0.54	-0.9
1,304,683	-		Sama_1077	0.54	-0.2
1,304,683	-		Sama_1077	0.54	-1.2
1,304,683	-		Sama_1077	0.54	-1.0
1,304,683	-		Sama_1077	0.54	-0.7
1,304,721	+		Sama_1077	0.58	-0.2
1,304,772	+		Sama_1077	0.63	+0.3
1,304,772	+		Sama_1077	0.63	+0.6
1,304,772	+		Sama_1077	0.63	+0.4
1,304,772	+		Sama_1077	0.63	+0.3
1,304,772	+		Sama_1077	0.63	+1.4
1,304,772	+		Sama_1077	0.63	+0.8
1,304,773	-		Sama_1077	0.63	-0.2
1,304,773	-		Sama_1077	0.63	+0.4
1,304,773	-		Sama_1077	0.63	+0.5
1,304,817	+		Sama_1077	0.68	-0.2
1,304,817	+		Sama_1077	0.68	+0.4
1,304,817	+		Sama_1077	0.68	-0.3
1,304,817	+		Sama_1077	0.68	-0.3
1,304,817	+		Sama_1077	0.68	+0.6
1,304,817	+		Sama_1077	0.68	+0.7
1,304,817	+		Sama_1077	0.68	-0.3
1,304,818	-		Sama_1077	0.68	-0.5
1,304,818	-		Sama_1077	0.68	-0.7
1,304,818	-		Sama_1077	0.68	+0.1
1,304,826	+		Sama_1077	0.69	+0.1
1,304,840	-		Sama_1077	0.71	-0.1
1,304,844	+		Sama_1077	0.71	-1.0
1,304,844	+		Sama_1077	0.71	-1.2
1,304,844	+		Sama_1077	0.71	+0.7
1,304,844	+		Sama_1077	0.71	+1.4
1,304,844	+		Sama_1077	0.71	-0.1
1,304,844	+		Sama_1077	0.71	-0.1
1,304,845	-		Sama_1077	0.71	-0.2
1,304,845	-		Sama_1077	0.71	+0.8
1,304,845	-		Sama_1077	0.71	+0.3
1,304,845	-		Sama_1077	0.71	+0.3
1,304,845	-		Sama_1077	0.71	-0.4
1,304,899	+		Sama_1077	0.77	-0.8
1,304,911	+		Sama_1077	0.79	+0.4
1,304,912	-		Sama_1077	0.79	+0.0
1,304,912	-		Sama_1077	0.79	+0.1
1,304,936	+		Sama_1077	0.81	-0.5
1,304,936	+		Sama_1077	0.81	+0.6
1,304,936	+		Sama_1077	0.81	+1.6
1,304,936	+		Sama_1077	0.81	-0.3
1,304,936	+		Sama_1077	0.81	-1.2
1,304,937	-		Sama_1077	0.82	-0.1
1,304,937	-		Sama_1077	0.82	+0.0
1,304,937	-		Sama_1077	0.82	+0.1
1,304,957	+		Sama_1077	0.84	+0.0
1,304,957	+		Sama_1077	0.84	+0.3
1,304,957	+		Sama_1077	0.84	-0.6
1,304,957	+		Sama_1077	0.84	+0.3
1,304,958	-		Sama_1077	0.84	+0.1
1,304,958	-		Sama_1077	0.84	+1.5
1,304,989	+		Sama_1077	0.87	-2.3
1,304,990	-		Sama_1077	0.87	+0.1
1,304,999	-		Sama_1077	0.88	+0.2
1,305,017	+				-0.2
1,305,062	+				+0.8
1,305,062	+				-0.5
1,305,063	-				+1.0
1,305,063	-				+0.4
1,305,063	-				+0.5
1,305,063	-				-0.4
1,305,063	-				+0.5
1,305,074	+				+0.4
1,305,074	+				-1.1
1,305,080	+				-0.7
1,305,117	-				+0.0
1,305,153	+				+1.2
1,305,204	+				+1.7
1,305,205	-				+0.3
1,305,212	+				+1.2
1,305,212	+				+0.7
1,305,213	-				+0.3
1,305,213	-				-0.1
1,305,216	+				+0.0
1,305,216	+				-0.6
1,305,216	+				+0.4
1,305,216	+				-0.2
1,305,216	+				+1.6
1,305,216	+				-0.4
1,305,216	+				-0.9
1,305,216	+				-1.3
1,305,216	+				+0.3
1,305,216	+				-0.9
1,305,216	+				-0.1
1,305,216	+				-1.4
1,305,217	-				-0.4
1,305,217	-				+0.4
1,305,217	-				+1.0
1,305,217	-				+0.9
1,305,217	-				+2.4
1,305,217	-				+1.2
1,305,217	-				+0.4
1,305,217	-				+0.8
1,305,222	+				+0.1
1,305,222	+				+0.0
1,305,246	+				+0.0
1,305,246	+				-0.6
1,305,274	+				-1.8
1,305,275	-				-0.4
1,305,291	+				-0.7
1,305,346	-				+0.4
1,305,384	-				+0.4
1,305,441	+		Sama_1078	0.11	+1.2
1,305,441	+		Sama_1078	0.11	-0.6
1,305,442	-		Sama_1078	0.12	+0.1
1,305,442	-		Sama_1078	0.12	+0.6
1,305,525	+		Sama_1078	0.16	+0.0
1,305,525	+		Sama_1078	0.16	+0.3
1,305,562	+		Sama_1078	0.18	+0.1
1,305,563	-		Sama_1078	0.18	+0.5
1,305,563	-		Sama_1078	0.18	+1.1
1,305,631	+		Sama_1078	0.22	-0.9
1,305,631	+		Sama_1078	0.22	-1.2
1,305,632	-		Sama_1078	0.22	-0.9
1,305,632	-		Sama_1078	0.22	+0.2
1,305,632	-		Sama_1078	0.22	+0.4
1,305,687	+		Sama_1078	0.25	+1.1
1,305,791	+		Sama_1078	0.31	-0.1
1,305,791	+		Sama_1078	0.31	-0.1
1,305,791	+		Sama_1078	0.31	-1.0
1,305,792	-		Sama_1078	0.31	-1.2
1,305,792	-		Sama_1078	0.31	+0.4
1,305,792	-		Sama_1078	0.31	-1.3
1,305,792	-		Sama_1078	0.31	-0.1
1,305,887	+		Sama_1078	0.36	+0.8
1,305,888	-		Sama_1078	0.36	-0.5
1,305,936	+		Sama_1078	0.39	+0.0
1,305,937	-		Sama_1078	0.39	+1.1
1,306,074	+		Sama_1078	0.47	-1.0
1,306,075	-		Sama_1078	0.47	+0.4