Experiment: Benzethonium chloride 0.01 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO1589 and SO1590 are separated by 125 nucleotides SO1590 and SO1591 are separated by 73 nucleotides SO1591 and SO1592 are separated by 183 nucleotides
SO1589: SO1589 - hypothetical protein (NCBI ptt file), at 1,664,141 to 1,664,944
SO1589
SO1590: SO1590 - hypothetical protein (NCBI ptt file), at 1,665,070 to 1,665,492
SO1590
SO1591: SO1591 - hypothetical protein (NCBI ptt file), at 1,665,566 to 1,665,718
SO1591
SO1592: SO1592 - hypothetical protein (NCBI ptt file), at 1,665,902 to 1,666,465
SO1592
Position (kb)
1665
1666 Strain fitness (log2 ratio)
-1
0
1 at 1664.579 kb on + strand, within SO1589 at 1664.841 kb on - strand, within SO1589 at 1664.866 kb on + strand at 1664.866 kb on + strand at 1664.874 kb on - strand at 1664.879 kb on - strand at 1665.136 kb on + strand, within SO1590 at 1665.136 kb on + strand, within SO1590 at 1665.136 kb on + strand, within SO1590 at 1665.146 kb on + strand, within SO1590 at 1665.200 kb on - strand, within SO1590 at 1665.219 kb on + strand, within SO1590 at 1665.365 kb on - strand, within SO1590 at 1665.390 kb on + strand, within SO1590 at 1666.007 kb on + strand, within SO1592 at 1666.116 kb on - strand, within SO1592 at 1666.158 kb on - strand, within SO1592 at 1666.164 kb on + strand, within SO1592 at 1666.174 kb on + strand, within SO1592 at 1666.218 kb on - strand, within SO1592 at 1666.240 kb on + strand, within SO1592 at 1666.240 kb on + strand, within SO1592 at 1666.240 kb on + strand, within SO1592 at 1666.240 kb on + strand, within SO1592 at 1666.240 kb on + strand, within SO1592 at 1666.240 kb on + strand, within SO1592 at 1666.240 kb on + strand, within SO1592 at 1666.240 kb on + strand, within SO1592 at 1666.240 kb on + strand, within SO1592 at 1666.240 kb on + strand, within SO1592 at 1666.240 kb on + strand, within SO1592 at 1666.240 kb on + strand, within SO1592 at 1666.248 kb on - strand, within SO1592 at 1666.248 kb on - strand, within SO1592 at 1666.248 kb on - strand, within SO1592 at 1666.248 kb on - strand, within SO1592 at 1666.248 kb on - strand, within SO1592 at 1666.248 kb on - strand, within SO1592 at 1666.248 kb on - strand, within SO1592 at 1666.248 kb on - strand, within SO1592 at 1666.248 kb on - strand, within SO1592 at 1666.248 kb on - strand, within SO1592 at 1666.248 kb on - strand, within SO1592 at 1666.248 kb on - strand, within SO1592 at 1666.311 kb on - strand, within SO1592 at 1666.429 kb on + strand at 1666.437 kb on - strand at 1666.602 kb on + strand at 1666.610 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.01 mM remove 1,664,579 + SO1589 0.54 +0.8 1,664,841 - SO1589 0.87 +0.1 1,664,866 + -0.2 1,664,866 + +0.4 1,664,874 - +0.6 1,664,879 - +0.8 1,665,136 + SO1590 0.16 +0.6 1,665,136 + SO1590 0.16 +0.9 1,665,136 + SO1590 0.16 -1.1 1,665,146 + SO1590 0.18 +0.2 1,665,200 - SO1590 0.31 -0.4 1,665,219 + SO1590 0.35 -0.1 1,665,365 - SO1590 0.70 -0.6 1,665,390 + SO1590 0.76 -0.1 1,666,007 + SO1592 0.19 +0.5 1,666,116 - SO1592 0.38 -0.3 1,666,158 - SO1592 0.45 -0.5 1,666,164 + SO1592 0.46 +0.0 1,666,174 + SO1592 0.48 +0.3 1,666,218 - SO1592 0.56 -0.3 1,666,240 + SO1592 0.60 +1.0 1,666,240 + SO1592 0.60 -0.1 1,666,240 + SO1592 0.60 +0.1 1,666,240 + SO1592 0.60 +0.2 1,666,240 + SO1592 0.60 +0.7 1,666,240 + SO1592 0.60 +0.9 1,666,240 + SO1592 0.60 +0.2 1,666,240 + SO1592 0.60 -0.4 1,666,240 + SO1592 0.60 -0.5 1,666,240 + SO1592 0.60 -0.2 1,666,240 + SO1592 0.60 -0.0 1,666,240 + SO1592 0.60 +0.2 1,666,248 - SO1592 0.61 +0.3 1,666,248 - SO1592 0.61 +0.1 1,666,248 - SO1592 0.61 -0.1 1,666,248 - SO1592 0.61 -0.3 1,666,248 - SO1592 0.61 -0.2 1,666,248 - SO1592 0.61 -0.5 1,666,248 - SO1592 0.61 +0.2 1,666,248 - SO1592 0.61 -0.2 1,666,248 - SO1592 0.61 +0.1 1,666,248 - SO1592 0.61 +0.3 1,666,248 - SO1592 0.61 -0.1 1,666,248 - SO1592 0.61 +0.2 1,666,311 - SO1592 0.73 -0.5 1,666,429 + -0.1 1,666,437 - +0.4 1,666,602 + -0.6 1,666,610 - -0.4
Or see this region's nucleotide sequence