Experiment: Putrescine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3701 and Psest_3702 overlap by 4 nucleotides Psest_3702 and Psest_3703 overlap by 4 nucleotides Psest_3703 and Psest_3704 overlap by 1 nucleotides
Psest_3701: Psest_3701 - 3-oxoacyl-(acyl-carrier-protein) synthase, at 3,865,383 to 3,866,576
_3701
Psest_3702: Psest_3702 - Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase, at 3,866,573 to 3,867,025
_3702
Psest_3703: Psest_3703 - 3-oxoacyl-(acyl-carrier-protein) reductase, putative, at 3,867,022 to 3,867,750
_3703
Psest_3704: Psest_3704 - 3-oxoacyl-(acyl-carrier-protein) synthase, at 3,867,750 to 3,868,982
_3704
Position (kb)
3866
3867
3868 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3865.689 kb on - strand, within Psest_3701 at 3865.834 kb on - strand, within Psest_3701 at 3865.834 kb on - strand, within Psest_3701 at 3866.129 kb on + strand, within Psest_3701 at 3866.130 kb on - strand, within Psest_3701 at 3866.130 kb on - strand, within Psest_3701 at 3866.130 kb on - strand, within Psest_3701 at 3866.130 kb on - strand, within Psest_3701 at 3866.221 kb on - strand, within Psest_3701 at 3866.492 kb on + strand at 3866.492 kb on + strand at 3866.546 kb on + strand at 3866.601 kb on + strand at 3866.834 kb on + strand, within Psest_3702 at 3866.834 kb on + strand, within Psest_3702 at 3866.835 kb on - strand, within Psest_3702 at 3866.835 kb on - strand, within Psest_3702 at 3866.875 kb on - strand, within Psest_3702 at 3867.002 kb on + strand at 3867.003 kb on - strand at 3867.003 kb on - strand at 3867.003 kb on - strand at 3867.006 kb on + strand at 3867.006 kb on + strand at 3867.006 kb on + strand at 3867.006 kb on + strand at 3867.006 kb on + strand at 3867.006 kb on + strand at 3867.006 kb on + strand at 3867.007 kb on - strand at 3867.007 kb on - strand at 3867.007 kb on - strand at 3867.007 kb on - strand at 3867.007 kb on - strand at 3867.007 kb on - strand at 3867.007 kb on - strand at 3867.007 kb on - strand at 3867.161 kb on + strand, within Psest_3703 at 3867.161 kb on + strand, within Psest_3703 at 3867.161 kb on + strand, within Psest_3703 at 3867.161 kb on + strand, within Psest_3703 at 3867.161 kb on + strand, within Psest_3703 at 3867.262 kb on + strand, within Psest_3703 at 3867.263 kb on - strand, within Psest_3703 at 3867.263 kb on - strand, within Psest_3703 at 3867.266 kb on - strand, within Psest_3703 at 3867.367 kb on + strand, within Psest_3703 at 3867.367 kb on + strand, within Psest_3703 at 3867.367 kb on + strand, within Psest_3703 at 3867.367 kb on + strand, within Psest_3703 at 3867.367 kb on + strand, within Psest_3703 at 3867.367 kb on + strand, within Psest_3703 at 3867.367 kb on + strand, within Psest_3703 at 3867.367 kb on + strand, within Psest_3703 at 3867.367 kb on + strand, within Psest_3703 at 3867.367 kb on + strand, within Psest_3703 at 3867.367 kb on + strand, within Psest_3703 at 3867.367 kb on + strand, within Psest_3703 at 3867.367 kb on + strand, within Psest_3703 at 3867.367 kb on + strand, within Psest_3703 at 3867.367 kb on + strand, within Psest_3703 at 3867.367 kb on + strand, within Psest_3703 at 3867.368 kb on - strand, within Psest_3703 at 3867.368 kb on - strand, within Psest_3703 at 3867.368 kb on - strand, within Psest_3703 at 3867.368 kb on - strand, within Psest_3703 at 3867.368 kb on - strand, within Psest_3703 at 3867.368 kb on - strand, within Psest_3703 at 3867.368 kb on - strand, within Psest_3703 at 3867.368 kb on - strand, within Psest_3703 at 3867.368 kb on - strand, within Psest_3703 at 3867.368 kb on - strand, within Psest_3703 at 3867.368 kb on - strand, within Psest_3703 at 3867.368 kb on - strand, within Psest_3703 at 3867.368 kb on - strand, within Psest_3703 at 3867.368 kb on - strand, within Psest_3703 at 3867.368 kb on - strand, within Psest_3703 at 3867.368 kb on - strand, within Psest_3703 at 3867.368 kb on - strand, within Psest_3703 at 3867.368 kb on - strand, within Psest_3703 at 3867.368 kb on - strand, within Psest_3703 at 3867.368 kb on - strand, within Psest_3703 at 3867.368 kb on - strand, within Psest_3703 at 3867.478 kb on + strand, within Psest_3703 at 3867.478 kb on + strand, within Psest_3703 at 3867.478 kb on + strand, within Psest_3703 at 3867.478 kb on + strand, within Psest_3703 at 3867.478 kb on + strand, within Psest_3703 at 3867.478 kb on + strand, within Psest_3703 at 3867.478 kb on + strand, within Psest_3703 at 3867.478 kb on + strand, within Psest_3703 at 3867.479 kb on - strand, within Psest_3703 at 3867.479 kb on - strand, within Psest_3703 at 3867.479 kb on - strand, within Psest_3703 at 3867.479 kb on - strand, within Psest_3703 at 3867.479 kb on - strand, within Psest_3703 at 3867.479 kb on - strand, within Psest_3703 at 3867.479 kb on - strand, within Psest_3703 at 3867.479 kb on - strand, within Psest_3703 at 3867.479 kb on - strand, within Psest_3703 at 3867.479 kb on - strand, within Psest_3703 at 3867.679 kb on - strand at 3867.706 kb on + strand at 3867.707 kb on - strand at 3867.707 kb on - strand at 3867.707 kb on - strand at 3867.707 kb on - strand at 3867.766 kb on + strand at 3867.766 kb on + strand at 3867.766 kb on + strand at 3867.766 kb on + strand at 3867.766 kb on + strand at 3867.860 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Putrescine (N) remove 3,865,689 - Psest_3701 0.26 +0.7 3,865,834 - Psest_3701 0.38 +0.3 3,865,834 - Psest_3701 0.38 -1.5 3,866,129 + Psest_3701 0.62 +0.7 3,866,130 - Psest_3701 0.63 +0.6 3,866,130 - Psest_3701 0.63 -0.0 3,866,130 - Psest_3701 0.63 -0.7 3,866,130 - Psest_3701 0.63 -1.0 3,866,221 - Psest_3701 0.70 +1.3 3,866,492 + +0.4 3,866,492 + +0.5 3,866,546 + +1.2 3,866,601 + +0.2 3,866,834 + Psest_3702 0.58 -1.6 3,866,834 + Psest_3702 0.58 -1.0 3,866,835 - Psest_3702 0.58 -0.3 3,866,835 - Psest_3702 0.58 +2.3 3,866,875 - Psest_3702 0.67 -0.6 3,867,002 + +0.3 3,867,003 - -1.3 3,867,003 - +1.3 3,867,003 - -0.7 3,867,006 + -0.3 3,867,006 + -0.6 3,867,006 + +0.3 3,867,006 + -0.8 3,867,006 + +0.6 3,867,006 + -0.1 3,867,006 + -0.5 3,867,007 - -0.2 3,867,007 - +0.5 3,867,007 - -0.4 3,867,007 - +0.4 3,867,007 - +0.3 3,867,007 - +1.6 3,867,007 - -1.5 3,867,007 - -0.1 3,867,161 + Psest_3703 0.19 +0.7 3,867,161 + Psest_3703 0.19 -0.2 3,867,161 + Psest_3703 0.19 +0.8 3,867,161 + Psest_3703 0.19 +0.5 3,867,161 + Psest_3703 0.19 +0.7 3,867,262 + Psest_3703 0.33 +0.4 3,867,263 - Psest_3703 0.33 -0.3 3,867,263 - Psest_3703 0.33 +1.3 3,867,266 - Psest_3703 0.33 +0.6 3,867,367 + Psest_3703 0.47 -0.1 3,867,367 + Psest_3703 0.47 -2.2 3,867,367 + Psest_3703 0.47 +0.7 3,867,367 + Psest_3703 0.47 -0.7 3,867,367 + Psest_3703 0.47 +0.1 3,867,367 + Psest_3703 0.47 -0.4 3,867,367 + Psest_3703 0.47 -0.2 3,867,367 + Psest_3703 0.47 +1.7 3,867,367 + Psest_3703 0.47 +0.7 3,867,367 + Psest_3703 0.47 -0.2 3,867,367 + Psest_3703 0.47 -1.0 3,867,367 + Psest_3703 0.47 +0.5 3,867,367 + Psest_3703 0.47 +0.5 3,867,367 + Psest_3703 0.47 -0.6 3,867,367 + Psest_3703 0.47 +0.6 3,867,367 + Psest_3703 0.47 +0.4 3,867,368 - Psest_3703 0.47 -0.3 3,867,368 - Psest_3703 0.47 -0.7 3,867,368 - Psest_3703 0.47 -0.3 3,867,368 - Psest_3703 0.47 -0.2 3,867,368 - Psest_3703 0.47 -0.9 3,867,368 - Psest_3703 0.47 +1.9 3,867,368 - Psest_3703 0.47 +0.3 3,867,368 - Psest_3703 0.47 -1.2 3,867,368 - Psest_3703 0.47 -0.0 3,867,368 - Psest_3703 0.47 +1.1 3,867,368 - Psest_3703 0.47 -0.3 3,867,368 - Psest_3703 0.47 +0.6 3,867,368 - Psest_3703 0.47 +0.5 3,867,368 - Psest_3703 0.47 +0.7 3,867,368 - Psest_3703 0.47 -0.4 3,867,368 - Psest_3703 0.47 +1.3 3,867,368 - Psest_3703 0.47 -1.9 3,867,368 - Psest_3703 0.47 -0.3 3,867,368 - Psest_3703 0.47 -1.0 3,867,368 - Psest_3703 0.47 -1.0 3,867,368 - Psest_3703 0.47 -0.5 3,867,478 + Psest_3703 0.63 +1.3 3,867,478 + Psest_3703 0.63 +0.3 3,867,478 + Psest_3703 0.63 -0.7 3,867,478 + Psest_3703 0.63 -1.1 3,867,478 + Psest_3703 0.63 +0.2 3,867,478 + Psest_3703 0.63 -1.4 3,867,478 + Psest_3703 0.63 +0.7 3,867,478 + Psest_3703 0.63 +1.6 3,867,479 - Psest_3703 0.63 -0.3 3,867,479 - Psest_3703 0.63 +1.5 3,867,479 - Psest_3703 0.63 -0.3 3,867,479 - Psest_3703 0.63 +1.3 3,867,479 - Psest_3703 0.63 -0.8 3,867,479 - Psest_3703 0.63 -0.4 3,867,479 - Psest_3703 0.63 +0.9 3,867,479 - Psest_3703 0.63 -0.2 3,867,479 - Psest_3703 0.63 +0.3 3,867,479 - Psest_3703 0.63 -2.3 3,867,679 - +0.1 3,867,706 + +0.1 3,867,707 - +0.7 3,867,707 - -0.0 3,867,707 - +0.5 3,867,707 - +0.4 3,867,766 + -2.2 3,867,766 + +0.5 3,867,766 + -2.5 3,867,766 + -0.4 3,867,766 + -0.9 3,867,860 + -0.9
Or see this region's nucleotide sequence