Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c27530

Experiment: m.b. Ceftazidime 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Ceftazidime 0.001 mg/ml
2,867,387	+		PGA1_c27520	0.25	+0.4
2,867,395	-		PGA1_c27520	0.26	+0.8
2,867,403	+		PGA1_c27520	0.26	-0.4
2,867,446	+		PGA1_c27520	0.30	+0.5
2,867,476	+		PGA1_c27520	0.32	+0.2
2,867,476	+		PGA1_c27520	0.32	+1.4
2,867,528	-		PGA1_c27520	0.36	+0.1
2,867,596	-		PGA1_c27520	0.41	-2.0
2,867,596	-		PGA1_c27520	0.41	-0.9
2,867,596	-		PGA1_c27520	0.41	+0.3
2,867,596	-		PGA1_c27520	0.41	+0.3
2,867,610	-		PGA1_c27520	0.42	-1.8
2,867,624	+		PGA1_c27520	0.44	-2.0
2,867,664	-		PGA1_c27520	0.47	+0.0
2,867,669	-		PGA1_c27520	0.47	-0.7
2,867,674	+		PGA1_c27520	0.47	+0.4
2,867,677	-		PGA1_c27520	0.48	+0.0
2,867,682	-		PGA1_c27520	0.48	+0.3
2,867,690	-		PGA1_c27520	0.49	-0.1
2,867,695	+		PGA1_c27520	0.49	+0.1
2,867,776	+		PGA1_c27520	0.55	+0.5
2,867,786	+		PGA1_c27520	0.56	-1.9
2,867,806	+		PGA1_c27520	0.58	-0.5
2,867,853	+		PGA1_c27520	0.61	-0.2
2,867,878	-		PGA1_c27520	0.63	+1.4
2,868,026	-		PGA1_c27520	0.75	+0.4
2,868,033	-		PGA1_c27520	0.75	-0.6
2,868,050	+		PGA1_c27520	0.77	-0.2
2,868,116	+		PGA1_c27520	0.82	+1.0
2,868,116	+		PGA1_c27520	0.82	+1.8
2,868,116	+		PGA1_c27520	0.82	-1.0
2,868,116	+		PGA1_c27520	0.82	-0.6
2,868,116	+		PGA1_c27520	0.82	-0.0
2,868,124	-		PGA1_c27520	0.82	-0.4
2,868,124	-		PGA1_c27520	0.82	+0.0
2,868,124	-		PGA1_c27520	0.82	+0.5
2,868,124	-		PGA1_c27520	0.82	+0.0
2,868,124	-		PGA1_c27520	0.82	+0.2
2,868,134	-		PGA1_c27520	0.83	-3.5
2,868,181	+		PGA1_c27520	0.87	-1.0
2,868,181	+		PGA1_c27520	0.87	-1.2
2,868,181	+		PGA1_c27520	0.87	-0.4
2,868,189	-		PGA1_c27520	0.87	-0.4
2,868,191	+		PGA1_c27520	0.88	-1.5
2,868,191	+		PGA1_c27520	0.88	-0.8
2,868,199	-		PGA1_c27520	0.88	-1.3
2,868,199	-		PGA1_c27520	0.88	+0.3
2,868,199	-		PGA1_c27520	0.88	+0.6
2,868,199	-		PGA1_c27520	0.88	-1.2
2,868,199	-				+0.8
2,868,199	-		PGA1_c27520	0.88	-0.2
2,868,199	-		PGA1_c27520	0.88	+0.3
2,868,199	-		PGA1_c27520	0.88	+0.8
2,868,237	+				+0.4
2,868,237	+				-0.7
2,868,299	+				+0.2
2,868,328	-				-0.7
2,868,335	+				+0.4
2,868,415	+				-0.7
2,868,426	+		PGA1_c27530	0.10	+0.5
2,868,471	+		PGA1_c27530	0.16	-0.4
2,868,549	+		PGA1_c27530	0.27	+0.1
2,868,554	+		PGA1_c27530	0.27	-1.2
2,868,557	-		PGA1_c27530	0.28	+0.1
2,868,557	-		PGA1_c27530	0.28	+0.6
2,868,559	+		PGA1_c27530	0.28	+0.6
2,868,562	-		PGA1_c27530	0.28	-0.9
2,868,562	-		PGA1_c27530	0.28	-1.3
2,868,564	+		PGA1_c27530	0.29	-0.5
2,868,564	+		PGA1_c27530	0.29	+0.4
2,868,567	-		PGA1_c27530	0.29	-1.5
2,868,569	+		PGA1_c27530	0.29	-0.6
2,868,572	-		PGA1_c27530	0.30	-0.6
2,868,585	+		PGA1_c27530	0.31	-0.4
2,868,593	-		PGA1_c27530	0.33	-0.5
2,868,593	-		PGA1_c27530	0.33	+1.0
2,868,687	+		PGA1_c27530	0.45	-0.1
2,868,690	-		PGA1_c27530	0.45	-1.4
2,868,710	+		PGA1_c27530	0.48	-0.1
2,868,737	+		PGA1_c27530	0.52	-0.2
2,868,777	-		PGA1_c27530	0.57	-0.8
2,868,788	+		PGA1_c27530	0.58	-0.2
2,868,820	+		PGA1_c27530	0.63	-1.5
2,868,922	-		PGA1_c27530	0.76	-3.2
2,868,990	+		PGA1_c27530	0.85	-0.9
2,868,993	-		PGA1_c27530	0.86	-0.0
2,869,006	+		PGA1_c27530	0.87	-0.9
2,869,006	+		PGA1_c27530	0.87	+0.1
2,869,072	-				+0.2
2,869,077	-				-1.4
2,869,086	+				-0.2
2,869,086	+				-0.8
2,869,167	+				-2.4
2,869,167	+				-1.4
2,869,177	+				-0.1
2,869,184	+				+1.8
2,869,184	+				+1.2
2,869,280	+		PGA1_c27540	0.16	-0.4
2,869,280	+		PGA1_c27540	0.16	-1.5
2,869,312	+		PGA1_c27540	0.18	+0.9
2,869,350	-		PGA1_c27540	0.22	+0.4
2,869,365	-		PGA1_c27540	0.23	-0.6
2,869,370	-		PGA1_c27540	0.23	-1.5
2,869,379	+		PGA1_c27540	0.24	+0.3
2,869,387	-		PGA1_c27540	0.25	-0.2
2,869,387	-		PGA1_c27540	0.25	+0.6
2,869,387	-		PGA1_c27540	0.25	-2.5
2,869,450	+		PGA1_c27540	0.30	+0.9
2,869,458	-		PGA1_c27540	0.31	+0.2
2,869,479	-		PGA1_c27540	0.33	-2.2
2,869,481	+		PGA1_c27540	0.33	-0.3
2,869,539	+		PGA1_c27540	0.38	-0.6
2,869,568	+		PGA1_c27540	0.40	-0.7
2,869,576	-		PGA1_c27540	0.41	+0.3
2,869,576	-		PGA1_c27540	0.41	+0.3
2,869,576	-		PGA1_c27540	0.41	-1.8
2,869,576	-		PGA1_c27540	0.41	-0.4
2,869,611	-		PGA1_c27540	0.44	-1.1
2,869,643	-		PGA1_c27540	0.47	+0.2
2,869,679	+		PGA1_c27540	0.50	-1.1
2,869,687	-		PGA1_c27540	0.51	+0.0
2,869,690	-		PGA1_c27540	0.51	-0.2
2,869,690	-		PGA1_c27540	0.51	-0.6
2,869,703	+		PGA1_c27540	0.52	+0.6
2,869,716	+		PGA1_c27540	0.53	-0.6
2,869,716	+		PGA1_c27540	0.53	-1.1
2,869,734	-		PGA1_c27540	0.55	-1.7
2,869,849	+		PGA1_c27540	0.65	-0.4
2,869,857	-		PGA1_c27540	0.65	-1.0
2,869,857	-		PGA1_c27540	0.65	-1.3
2,869,857	-		PGA1_c27540	0.65	+0.6
2,869,857	-		PGA1_c27540	0.65	+0.4
2,869,857	-		PGA1_c27540	0.65	-2.2
2,869,925	+		PGA1_c27540	0.71	-2.1
2,869,925	+		PGA1_c27540	0.71	+1.2
2,869,933	-		PGA1_c27540	0.72	+0.5
2,869,981	+		PGA1_c27540	0.76	-0.8
2,870,000	+		PGA1_c27540	0.78	+1.1
2,870,037	-		PGA1_c27540	0.81	+0.0
2,870,060	+		PGA1_c27540	0.83	-1.6
2,870,072	+		PGA1_c27540	0.84	+1.3
2,870,085	-		PGA1_c27540	0.85	-0.8
2,870,086	-		PGA1_c27540	0.85	+0.7