Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c25900

Experiment: m.b. Ceftazidime 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Ceftazidime 0.001 mg/ml
2,698,376	+		PGA1_c25890	0.15	+0.3
2,698,405	-		PGA1_c25890	0.17	+0.4
2,698,452	-		PGA1_c25890	0.22	+0.8
2,698,475	+		PGA1_c25890	0.24	-1.3
2,698,475	+		PGA1_c25890	0.24	+0.1
2,698,498	-		PGA1_c25890	0.26	+0.1
2,698,498	-		PGA1_c25890	0.26	+0.8
2,698,502	+		PGA1_c25890	0.26	+0.3
2,698,509	+		PGA1_c25890	0.27	-0.4
2,698,525	+		PGA1_c25890	0.28	-0.6
2,698,533	+		PGA1_c25890	0.29	-1.0
2,698,548	-		PGA1_c25890	0.30	-0.2
2,698,563	-		PGA1_c25890	0.32	-0.9
2,698,615	-		PGA1_c25890	0.37	+1.8
2,698,653	-		PGA1_c25890	0.40	+0.4
2,698,781	-		PGA1_c25890	0.52	-0.5
2,698,793	+		PGA1_c25890	0.53	-1.0
2,698,874	+		PGA1_c25890	0.61	-0.6
2,698,882	-		PGA1_c25890	0.61	+0.8
2,698,882	-		PGA1_c25890	0.61	+1.1
2,698,884	+		PGA1_c25890	0.61	+2.8
2,698,884	+		PGA1_c25890	0.61	-0.5
2,698,884	+		PGA1_c25890	0.61	-1.4
2,698,884	+		PGA1_c25890	0.61	+1.0
2,698,884	+		PGA1_c25890	0.61	+0.1
2,698,884	+		PGA1_c25890	0.61	+1.4
2,698,892	-		PGA1_c25890	0.62	-1.2
2,698,892	-		PGA1_c25890	0.62	+0.4
2,698,892	-		PGA1_c25890	0.62	-2.9
2,698,892	-		PGA1_c25890	0.62	-0.2
2,698,935	+		PGA1_c25890	0.66	-1.3
2,698,943	-		PGA1_c25890	0.67	+0.7
2,698,943	-		PGA1_c25890	0.67	-1.0
2,699,035	-		PGA1_c25890	0.75	-1.7
2,699,050	-		PGA1_c25890	0.77	-1.4
2,699,093	+		PGA1_c25890	0.81	+1.0
2,699,093	+		PGA1_c25890	0.81	-0.8
2,699,093	+		PGA1_c25890	0.81	+0.9
2,699,093	+		PGA1_c25890	0.81	+1.6
2,699,108	+		PGA1_c25890	0.82	-1.2
2,699,108	+		PGA1_c25890	0.82	+0.7
2,699,116	-		PGA1_c25890	0.83	+2.1
2,699,160	-		PGA1_c25890	0.87	-1.8
2,699,162	+		PGA1_c25890	0.87	+1.8
2,699,162	+		PGA1_c25890	0.87	+1.7
2,699,175	-		PGA1_c25890	0.88	-0.4
2,699,250	+				-0.4
2,699,258	-				-2.0
2,699,315	+				-0.6
2,699,323	-				-0.1
2,699,355	-				-1.3
2,699,379	+				-0.4
2,699,387	-				+0.6
2,699,416	-				+1.8
2,699,635	+		PGA1_c25900	0.32	-0.0
2,699,637	+		PGA1_c25900	0.32	+1.1
2,699,647	+		PGA1_c25900	0.33	+1.5
2,699,652	+		PGA1_c25900	0.34	+0.9
2,699,657	+		PGA1_c25900	0.34	-0.2
2,699,676	-		PGA1_c25900	0.36	-0.1
2,699,760	+		PGA1_c25900	0.44	+0.8
2,699,784	+		PGA1_c25900	0.47	+1.0
2,699,792	-		PGA1_c25900	0.47	+0.4
2,699,910	+		PGA1_c25900	0.59	+1.8
2,699,910	+		PGA1_c25900	0.59	-0.8
2,699,910	+		PGA1_c25900	0.59	+0.7
2,699,911	+		PGA1_c25900	0.59	+1.4
2,699,913	+		PGA1_c25900	0.59	+0.8
2,699,919	-		PGA1_c25900	0.60	+1.0
2,700,047	-		PGA1_c25900	0.72	+0.1
2,700,090	+		PGA1_c25900	0.76	+1.7
2,700,167	+		PGA1_c25900	0.84	-1.5
2,700,176	+		PGA1_c25900	0.85	+3.5
2,700,289	+				-0.2
2,700,302	-				+0.3
2,700,327	+				+1.0
2,700,335	-				-1.4
2,700,363	+				+0.4
2,700,384	+				+0.3
2,700,391	+				+2.4
2,700,397	-				-0.8
2,700,399	-				-0.2
2,700,435	+		PGA1_c25910	0.10	+0.6
2,700,443	-		PGA1_c25910	0.11	-1.2
2,700,444	-		PGA1_c25910	0.11	-1.2
2,700,444	-		PGA1_c25910	0.11	+0.8
2,700,483	+		PGA1_c25910	0.15	+1.8
2,700,490	-		PGA1_c25910	0.16	+0.2
2,700,557	+		PGA1_c25910	0.22	+0.4
2,700,573	+		PGA1_c25910	0.24	-0.2
2,700,587	+		PGA1_c25910	0.25	-0.6
2,700,623	+		PGA1_c25910	0.29	-1.2
2,700,628	+		PGA1_c25910	0.29	+0.6
2,700,628	+		PGA1_c25910	0.29	+0.4
2,700,628	+		PGA1_c25910	0.29	+0.8
2,700,628	+		PGA1_c25910	0.29	-1.0
2,700,628	+		PGA1_c25910	0.29	-1.4
2,700,636	-		PGA1_c25910	0.30	+0.3
2,700,636	-		PGA1_c25910	0.30	+0.0
2,700,636	-		PGA1_c25910	0.30	+0.8
2,700,636	-		PGA1_c25910	0.30	-1.2
2,700,687	-		PGA1_c25910	0.35	+0.5
2,700,702	+		PGA1_c25910	0.37	+0.5
2,700,710	-		PGA1_c25910	0.37	-0.6
2,700,731	+		PGA1_c25910	0.39	+4.0
2,700,761	-		PGA1_c25910	0.42	-0.2
2,700,800	-		PGA1_c25910	0.46	+0.3
2,700,809	+		PGA1_c25910	0.47	+1.1
2,700,814	+		PGA1_c25910	0.48	-1.5
2,700,814	+		PGA1_c25910	0.48	-0.2
2,700,899	-		PGA1_c25910	0.56	+0.3
2,700,925	+		PGA1_c25910	0.59	+0.2
2,700,933	-		PGA1_c25910	0.59	+0.7
2,700,935	+		PGA1_c25910	0.59	-1.9
2,700,935	+		PGA1_c25910	0.59	+0.2
2,700,935	+		PGA1_c25910	0.59	+2.0
2,700,935	+		PGA1_c25910	0.59	+0.8
2,700,935	+		PGA1_c25910	0.59	-1.4
2,700,940	+		PGA1_c25910	0.60	-0.2
2,700,943	-		PGA1_c25910	0.60	+0.5
2,700,943	-		PGA1_c25910	0.60	-0.1
2,700,943	-		PGA1_c25910	0.60	-0.5
2,700,943	-		PGA1_c25910	0.60	+0.4
2,700,959	+		PGA1_c25910	0.62	+0.8
2,701,001	+		PGA1_c25910	0.66	+0.1
2,701,009	-		PGA1_c25910	0.67	+0.4
2,701,016	+		PGA1_c25910	0.67	+0.4
2,701,017	-		PGA1_c25910	0.68	+1.6
2,701,017	-		PGA1_c25910	0.68	+1.1
2,701,024	-		PGA1_c25910	0.68	+0.1
2,701,024	-		PGA1_c25910	0.68	+1.7
2,701,113	+		PGA1_c25910	0.77	-1.5
2,701,299	+				+0.3
2,701,313	+				+0.8
2,701,316	-				-2.5
2,701,317	-				-2.5