Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c20940

Experiment: m.b. Ceftazidime 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Ceftazidime 0.001 mg/ml
2,170,805	+		PGA1_c20930	0.54	+0.5
2,170,805	+		PGA1_c20930	0.54	+1.2
2,170,805	+		PGA1_c20930	0.54	+0.7
2,170,813	-		PGA1_c20930	0.55	+1.3
2,170,813	-		PGA1_c20930	0.55	+0.1
2,170,813	-		PGA1_c20930	0.55	+0.5
2,170,820	-		PGA1_c20930	0.55	+1.5
2,170,881	-		PGA1_c20930	0.58	+0.3
2,170,898	+		PGA1_c20930	0.59	-0.2
2,170,912	-		PGA1_c20930	0.60	+0.6
2,170,939	+		PGA1_c20930	0.62	+0.4
2,170,939	+		PGA1_c20930	0.62	-0.1
2,171,049	+		PGA1_c20930	0.68	+0.9
2,171,049	+		PGA1_c20930	0.68	-0.9
2,171,049	+		PGA1_c20930	0.68	+1.7
2,171,049	+		PGA1_c20930	0.68	-0.6
2,171,049	+		PGA1_c20930	0.68	+0.0
2,171,049	+		PGA1_c20930	0.68	+0.4
2,171,049	+		PGA1_c20930	0.68	+0.3
2,171,057	-		PGA1_c20930	0.68	-1.5
2,171,057	-		PGA1_c20930	0.68	+0.3
2,171,057	-		PGA1_c20930	0.68	-0.9
2,171,057	-		PGA1_c20930	0.68	-0.7
2,171,057	-		PGA1_c20930	0.68	+1.3
2,171,067	-		PGA1_c20930	0.69	+0.4
2,171,082	+		PGA1_c20930	0.69	-1.3
2,171,220	+		PGA1_c20930	0.77	-0.3
2,171,226	+		PGA1_c20930	0.77	+1.4
2,171,226	+		PGA1_c20930	0.77	-0.4
2,171,234	-		PGA1_c20930	0.78	+1.7
2,171,240	-		PGA1_c20930	0.78	+1.1
2,171,243	-		PGA1_c20930	0.78	-0.3
2,171,302	+		PGA1_c20930	0.81	+0.3
2,171,310	-		PGA1_c20930	0.82	-0.5
2,171,324	+		PGA1_c20930	0.83	+0.9
2,171,324	+		PGA1_c20930	0.83	-0.9
2,171,326	+		PGA1_c20930	0.83	+0.0
2,171,326	+		PGA1_c20930	0.83	+0.1
2,171,326	+		PGA1_c20930	0.83	+0.2
2,171,326	+		PGA1_c20930	0.83	+2.0
2,171,326	+		PGA1_c20930	0.83	-0.6
2,171,332	-		PGA1_c20930	0.83	+0.6
2,171,332	-		PGA1_c20930	0.83	+1.0
2,171,332	-		PGA1_c20930	0.83	-0.5
2,171,334	-		PGA1_c20930	0.83	+0.1
2,171,334	-		PGA1_c20930	0.83	+0.1
2,171,334	-		PGA1_c20930	0.83	-1.9
2,171,334	-		PGA1_c20930	0.83	-0.1
2,171,334	-		PGA1_c20930	0.83	+0.7
2,171,334	-		PGA1_c20930	0.83	-0.5
2,171,334	-		PGA1_c20930	0.83	-0.6
2,171,334	-		PGA1_c20930	0.83	-1.1
2,171,334	-		PGA1_c20930	0.83	+0.5
2,171,334	-		PGA1_c20930	0.83	-1.0
2,171,334	-		PGA1_c20930	0.83	+0.7
2,171,334	-		PGA1_c20930	0.83	+1.4
2,171,334	-		PGA1_c20930	0.83	-0.9
2,171,334	-		PGA1_c20930	0.83	-0.4
2,171,334	-		PGA1_c20930	0.83	-1.5
2,171,334	-		PGA1_c20930	0.83	-1.3
2,171,334	-		PGA1_c20930	0.83	+0.6
2,171,334	-		PGA1_c20930	0.83	-0.2
2,171,334	-		PGA1_c20930	0.83	-2.1
2,171,334	-		PGA1_c20930	0.83	+1.8
2,171,390	+		PGA1_c20930	0.86	+0.1
2,171,392	+		PGA1_c20930	0.86	-1.3
2,171,453	+		PGA1_c20930	0.90	-0.3
2,171,467	-				+1.8
2,171,497	-				+0.1
2,171,506	-				+0.1
2,171,617	+				-0.3
2,171,625	-				-1.5
2,171,625	-				+0.1
2,171,630	-				+0.7
2,171,634	+				+1.0
2,171,637	-				+0.7
2,171,642	-				-0.6
2,171,661	+				+0.4
2,171,671	+				-0.4
2,171,673	+				+0.2
2,171,673	+				-0.9
2,171,673	+				+1.2
2,171,679	-				+1.6
2,171,679	-				-0.0
2,171,681	-				-0.7
2,171,681	-				-0.9
2,171,681	-				+0.7
2,171,696	-				-0.3
2,171,697	+				-0.9
2,171,705	-				+0.9
2,171,729	+				+0.7
2,171,769	+				-0.3
2,171,769	+				+1.6
2,171,789	+				+1.0
2,171,790	+				+0.1
2,171,821	-				-0.7
2,171,821	-				-0.2
2,171,828	-				+1.5
2,171,856	+				+0.3
2,171,859	-				+1.1
2,171,902	-				-0.9
2,171,954	+		PGA1_c20940	0.13	+0.6
2,171,993	+		PGA1_c20940	0.16	-1.1
2,171,996	-		PGA1_c20940	0.16	+1.1
2,172,001	-		PGA1_c20940	0.17	+0.6
2,172,090	+		PGA1_c20940	0.24	+0.3
2,172,093	-		PGA1_c20940	0.24	-1.1
2,172,141	+		PGA1_c20940	0.28	-0.6
2,172,144	-		PGA1_c20940	0.28	-1.1
2,172,144	-		PGA1_c20940	0.28	+1.3
2,172,144	-		PGA1_c20940	0.28	-0.4
2,172,149	-		PGA1_c20940	0.28	-3.4
2,172,190	+		PGA1_c20940	0.32	+0.7
2,172,202	+		PGA1_c20940	0.33	+0.1
2,172,202	+		PGA1_c20940	0.33	-0.1
2,172,202	+		PGA1_c20940	0.33	-0.3
2,172,202	+		PGA1_c20940	0.33	+0.2
2,172,391	+		PGA1_c20940	0.47	-0.9
2,172,433	+		PGA1_c20940	0.51	-0.3
2,172,527	-		PGA1_c20940	0.58	-1.4
2,172,533	+		PGA1_c20940	0.59	+0.7
2,172,541	-		PGA1_c20940	0.59	-0.9
2,172,589	+		PGA1_c20940	0.63	-1.6
2,172,629	+		PGA1_c20940	0.66	-0.6
2,172,633	-		PGA1_c20940	0.66	-0.9
2,172,652	+		PGA1_c20940	0.68	-1.3
2,172,713	+		PGA1_c20940	0.73	+0.3
2,172,713	+		PGA1_c20940	0.73	-1.6
2,172,713	+		PGA1_c20940	0.73	-1.1
2,172,739	-		PGA1_c20940	0.75	-0.6
2,173,073	+				-0.5
2,173,117	+				+0.2
2,173,196	-		PGA1_c20950	0.10	+2.0
2,173,207	+		PGA1_c20950	0.12	+1.1
2,173,233	+		PGA1_c20950	0.17	+0.2
2,173,270	+		PGA1_c20950	0.23	-0.9
2,173,270	+		PGA1_c20950	0.23	+0.2
2,173,270	+		PGA1_c20950	0.23	-0.7
2,173,270	+		PGA1_c20950	0.23	+0.2
2,173,278	-		PGA1_c20950	0.25	+1.1
2,173,278	-		PGA1_c20950	0.25	+0.2
2,173,389	-		PGA1_c20950	0.44	+0.5
2,173,444	+		PGA1_c20950	0.54	+0.7
2,173,520	-		PGA1_c20950	0.67	-1.6
2,173,611	-		PGA1_c20950	0.83	+0.6
2,173,694	+				+0.2
2,173,694	+				+0.7
2,173,694	+				-0.3
2,173,702	-				-0.4
2,173,791	-				+0.7
2,173,843	-		PGA1_c20960	0.13	-0.3
2,174,005	-		PGA1_c20960	0.31	+1.5
2,174,010	-		PGA1_c20960	0.32	-0.1
2,174,020	-		PGA1_c20960	0.33	+0.7