Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c12940

Experiment: m.b. Ceftazidime 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Ceftazidime 0.001 mg/ml
1,336,966	-		PGA1_c12910	0.80	-1.1
1,337,015	-		PGA1_c12910	0.84	-0.6
1,337,123	-				+0.6
1,337,133	-				-1.4
1,337,195	+				-0.4
1,337,203	-				-1.3
1,337,203	-				+0.1
1,337,312	-		PGA1_c12920	0.10	+0.1
1,337,312	-		PGA1_c12920	0.10	-0.2
1,337,351	+		PGA1_c12920	0.18	-2.5
1,337,358	+		PGA1_c12920	0.19	+0.3
1,337,383	-		PGA1_c12920	0.24	+0.2
1,337,434	+		PGA1_c12920	0.34	+0.2
1,337,442	-		PGA1_c12920	0.36	+1.1
1,337,574	-		PGA1_c12920	0.62	-0.5
1,337,574	-		PGA1_c12920	0.62	-0.5
1,337,784	+				-0.4
1,337,784	+				-0.3
1,337,787	-		PGA1_c12930	0.10	-0.5
1,337,787	-		PGA1_c12930	0.10	-1.0
1,337,787	-		PGA1_c12930	0.10	-2.0
1,337,787	-		PGA1_c12930	0.10	+1.1
1,337,787	-		PGA1_c12930	0.10	-0.0
1,337,792	-		PGA1_c12930	0.15	+2.6
1,337,792	-		PGA1_c12930	0.15	+1.1
1,337,797	-		PGA1_c12930	0.19	+0.2
1,337,873	-				-0.6
1,337,907	+				+0.2
1,337,930	-				+1.1
1,337,941	+				+0.8
1,337,941	+				-1.8
1,337,949	-				-2.5
1,337,949	-				+0.5
1,337,949	-				-0.4
1,337,996	+				+0.7
1,338,023	-				+0.6
1,338,072	-		PGA1_c12940	0.16	+0.3
1,338,102	-		PGA1_c12940	0.20	-0.1
1,338,167	-		PGA1_c12940	0.30	-1.5
1,338,211	-		PGA1_c12940	0.36	-0.9
1,338,211	-		PGA1_c12940	0.36	-0.7
1,338,285	+		PGA1_c12940	0.47	+1.1
1,338,286	-		PGA1_c12940	0.47	-0.6
1,338,286	-		PGA1_c12940	0.47	+0.0
1,338,351	-		PGA1_c12940	0.57	-1.4
1,338,447	-		PGA1_c12940	0.71	-2.2
1,338,493	-		PGA1_c12940	0.77	-2.4
1,338,509	-		PGA1_c12940	0.80	-0.7
1,338,580	+				-0.3
1,338,627	+				-0.9
1,338,640	-				-0.1
1,338,712	+				-0.4
1,338,712	+				+0.3
1,338,712	+				-0.1
1,338,720	-				+1.3
1,338,722	-				+1.2
1,338,756	-				+0.2
1,338,772	+				-0.1
1,338,903	-		PGA1_c12950	0.12	-0.2
1,338,911	-		PGA1_c12950	0.12	-0.4
1,338,913	+		PGA1_c12950	0.12	-0.2
1,338,947	-		PGA1_c12950	0.14	+0.6
1,339,053	+		PGA1_c12950	0.19	-0.3
1,339,125	+		PGA1_c12950	0.22	-1.3
1,339,126	-		PGA1_c12950	0.23	-1.0
1,339,133	-		PGA1_c12950	0.23	-0.8
1,339,159	+		PGA1_c12950	0.24	+0.2
1,339,179	+		PGA1_c12950	0.25	-0.0
1,339,194	+		PGA1_c12950	0.26	-1.6
1,339,194	+		PGA1_c12950	0.26	-0.3
1,339,222	-		PGA1_c12950	0.27	-1.5
1,339,270	-		PGA1_c12950	0.29	+0.5
1,339,271	+		PGA1_c12950	0.29	+0.3
1,339,321	+		PGA1_c12950	0.32	+0.2
1,339,369	+		PGA1_c12950	0.34	+0.5
1,339,414	+		PGA1_c12950	0.36	-0.5
1,339,424	+		PGA1_c12950	0.37	-1.7
1,339,424	+		PGA1_c12950	0.37	+0.2
1,339,424	+		PGA1_c12950	0.37	-0.6
1,339,438	-		PGA1_c12950	0.37	-0.1
1,339,440	-		PGA1_c12950	0.38	-1.2
1,339,458	+		PGA1_c12950	0.38	+0.1
1,339,508	+		PGA1_c12950	0.41	+0.4
1,339,516	-		PGA1_c12950	0.41	-0.5
1,339,516	-		PGA1_c12950	0.41	-0.0
1,339,534	-		PGA1_c12950	0.42	+0.8
1,339,539	-		PGA1_c12950	0.42	+0.5
1,339,545	+		PGA1_c12950	0.43	-0.6
1,339,545	+		PGA1_c12950	0.43	+1.1
1,339,545	+		PGA1_c12950	0.43	-1.0
1,339,545	+		PGA1_c12950	0.43	-0.3
1,339,545	+		PGA1_c12950	0.43	+0.4
1,339,545	+		PGA1_c12950	0.43	+0.8
1,339,545	+		PGA1_c12950	0.43	-0.5
1,339,545	+		PGA1_c12950	0.43	+2.0
1,339,545	+		PGA1_c12950	0.43	-0.1
1,339,545	+		PGA1_c12950	0.43	+0.9
1,339,545	+		PGA1_c12950	0.43	+0.5
1,339,553	-		PGA1_c12950	0.43	-2.4
1,339,553	-		PGA1_c12950	0.43	-0.6
1,339,553	-		PGA1_c12950	0.43	-0.2
1,339,553	-		PGA1_c12950	0.43	+1.6
1,339,553	-		PGA1_c12950	0.43	-0.9
1,339,553	-		PGA1_c12950	0.43	-0.4
1,339,553	-		PGA1_c12950	0.43	-0.6
1,339,568	-		PGA1_c12950	0.44	+0.1