Experiment: Anaero. lactate (C), nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2534 and Dsui_2535 are separated by 75 nucleotides Dsui_2535 and Dsui_2536 overlap by 66 nucleotides Dsui_2536 and Dsui_2537 are separated by 205 nucleotides
Dsui_2534: Dsui_2534 - TRAP transporter, DctM subunit, at 2,685,636 to 2,686,925
_2534
Dsui_2535: Dsui_2535 - putative divalent heavy-metal cations transporter, at 2,687,001 to 2,687,774
_2535
Dsui_2536: Dsui_2536 - hypothetical protein, at 2,687,709 to 2,688,020
_2536
Dsui_2537: Dsui_2537 - poly(R)-hydroxyalkanoic acid synthase, class I, at 2,688,226 to 2,689,965
_2537
Position (kb)
2687
2688
2689 Strain fitness (log2 ratio)
-2
-1
0
1 at 2686.734 kb on - strand at 2686.828 kb on - strand at 2687.077 kb on + strand at 2687.101 kb on + strand, within Dsui_2535 at 2687.200 kb on - strand, within Dsui_2535 at 2687.386 kb on - strand, within Dsui_2535 at 2687.518 kb on - strand at 2687.569 kb on + strand, within Dsui_2535 at 2687.689 kb on + strand, within Dsui_2535 at 2687.695 kb on + strand, within Dsui_2535 at 2687.768 kb on + strand at 2687.776 kb on - strand, within Dsui_2536 at 2687.860 kb on - strand, within Dsui_2536 at 2687.860 kb on - strand, within Dsui_2536 at 2687.896 kb on - strand, within Dsui_2536 at 2687.929 kb on + strand, within Dsui_2536 at 2688.204 kb on + strand at 2688.206 kb on + strand at 2688.214 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), nitrate electron acceptor remove 2,686,734 - +1.0 2,686,828 - -0.8 2,687,077 + -0.0 2,687,101 + Dsui_2535 0.13 +0.2 2,687,200 - Dsui_2535 0.26 -1.8 2,687,386 - Dsui_2535 0.50 +0.1 2,687,518 - +0.4 2,687,569 + Dsui_2535 0.73 -0.6 2,687,689 + Dsui_2535 0.89 +1.1 2,687,695 + Dsui_2535 0.90 +0.1 2,687,768 + +0.0 2,687,776 - Dsui_2536 0.21 +0.1 2,687,860 - Dsui_2536 0.48 +0.1 2,687,860 - Dsui_2536 0.48 +0.3 2,687,896 - Dsui_2536 0.60 +0.8 2,687,929 + Dsui_2536 0.71 -0.1 2,688,204 + -0.6 2,688,206 + -0.5 2,688,214 - -0.8
Or see this region's nucleotide sequence