Experiment: Anaero. lactate (C), nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0652 and Dsui_0653 are separated by 108 nucleotides Dsui_0653 and Dsui_0654 are separated by 238 nucleotides Dsui_0654 and Dsui_0655 are separated by 125 nucleotides
Dsui_0652: Dsui_0652 - putative membrane protein, at 645,205 to 646,335
_0652
Dsui_0653: Dsui_0653 - putative SAM-dependent methyltransferase, at 646,444 to 647,631
_0653
Dsui_0654: Dsui_0654 - hypothetical protein, at 647,870 to 648,325
_0654
Dsui_0655: Dsui_0655 - putative membrane protein, at 648,451 to 649,077
_0655
Position (kb) 646
647
648 Strain fitness (log2 ratio) -2
-1
0
1
2 at 645.519 kb on - strand, within Dsui_0652 at 645.722 kb on + strand, within Dsui_0652 at 645.727 kb on + strand, within Dsui_0652 at 645.736 kb on - strand at 645.747 kb on + strand, within Dsui_0652 at 645.790 kb on + strand, within Dsui_0652 at 645.855 kb on - strand at 645.855 kb on - strand at 645.931 kb on + strand, within Dsui_0652 at 645.951 kb on + strand, within Dsui_0652 at 645.957 kb on + strand, within Dsui_0652 at 645.965 kb on + strand, within Dsui_0652 at 646.000 kb on + strand, within Dsui_0652 at 646.045 kb on - strand at 646.138 kb on - strand, within Dsui_0652 at 646.204 kb on - strand, within Dsui_0652 at 646.281 kb on - strand at 646.435 kb on + strand at 646.615 kb on + strand, within Dsui_0653 at 646.632 kb on + strand, within Dsui_0653 at 646.632 kb on + strand, within Dsui_0653 at 646.784 kb on - strand, within Dsui_0653 at 646.905 kb on - strand, within Dsui_0653 at 647.054 kb on + strand, within Dsui_0653 at 647.062 kb on - strand, within Dsui_0653 at 647.079 kb on + strand at 647.106 kb on - strand, within Dsui_0653 at 647.197 kb on + strand at 647.252 kb on - strand, within Dsui_0653 at 647.304 kb on + strand, within Dsui_0653 at 647.304 kb on + strand, within Dsui_0653 at 647.312 kb on - strand, within Dsui_0653 at 647.417 kb on + strand, within Dsui_0653 at 647.445 kb on + strand, within Dsui_0653 at 647.445 kb on + strand, within Dsui_0653 at 647.534 kb on + strand at 647.604 kb on + strand at 647.866 kb on + strand at 647.940 kb on - strand at 647.955 kb on - strand, within Dsui_0654 at 647.967 kb on + strand, within Dsui_0654 at 647.989 kb on - strand, within Dsui_0654 at 647.990 kb on - strand, within Dsui_0654 at 648.044 kb on - strand at 648.101 kb on + strand, within Dsui_0654 at 648.138 kb on + strand, within Dsui_0654 at 648.144 kb on - strand at 648.185 kb on + strand, within Dsui_0654 at 648.190 kb on + strand, within Dsui_0654 at 648.193 kb on - strand, within Dsui_0654 at 648.211 kb on + strand, within Dsui_0654 at 648.225 kb on + strand at 648.226 kb on - strand, within Dsui_0654 at 648.274 kb on + strand, within Dsui_0654 at 648.282 kb on - strand at 648.399 kb on + strand at 648.421 kb on - strand at 648.421 kb on - strand at 648.423 kb on + strand at 648.448 kb on + strand at 648.497 kb on + strand at 648.505 kb on - strand at 648.582 kb on + strand, within Dsui_0655 at 648.592 kb on + strand, within Dsui_0655 at 648.600 kb on - strand, within Dsui_0655 at 648.622 kb on + strand, within Dsui_0655
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), nitrate electron acceptor remove 645,519 - Dsui_0652 0.28 +0.2 645,722 + Dsui_0652 0.46 -0.6 645,727 + Dsui_0652 0.46 -0.4 645,736 - -0.4 645,747 + Dsui_0652 0.48 -0.5 645,790 + Dsui_0652 0.52 +0.1 645,855 - +0.9 645,855 - +1.9 645,931 + Dsui_0652 0.64 +0.2 645,951 + Dsui_0652 0.66 +0.3 645,957 + Dsui_0652 0.66 -0.6 645,965 + Dsui_0652 0.67 +0.5 646,000 + Dsui_0652 0.70 +0.9 646,045 - -1.1 646,138 - Dsui_0652 0.82 +0.5 646,204 - Dsui_0652 0.88 +1.1 646,281 - +1.3 646,435 + +0.2 646,615 + Dsui_0653 0.14 +0.1 646,632 + Dsui_0653 0.16 -0.6 646,632 + Dsui_0653 0.16 +0.2 646,784 - Dsui_0653 0.29 -0.9 646,905 - Dsui_0653 0.39 -0.4 647,054 + Dsui_0653 0.51 -0.3 647,062 - Dsui_0653 0.52 -1.8 647,079 + +0.7 647,106 - Dsui_0653 0.56 +0.3 647,197 + -0.9 647,252 - Dsui_0653 0.68 +0.4 647,304 + Dsui_0653 0.72 +0.1 647,304 + Dsui_0653 0.72 +0.2 647,312 - Dsui_0653 0.73 +0.5 647,417 + Dsui_0653 0.82 -0.2 647,445 + Dsui_0653 0.84 -0.6 647,445 + Dsui_0653 0.84 +0.0 647,534 + -0.7 647,604 + +0.2 647,866 + +0.2 647,940 - -0.4 647,955 - Dsui_0654 0.19 +0.7 647,967 + Dsui_0654 0.21 +0.1 647,989 - Dsui_0654 0.26 +0.7 647,990 - Dsui_0654 0.26 +0.1 648,044 - +0.9 648,101 + Dsui_0654 0.51 +0.0 648,138 + Dsui_0654 0.59 +0.3 648,144 - +1.9 648,185 + Dsui_0654 0.69 -0.1 648,190 + Dsui_0654 0.70 +0.2 648,193 - Dsui_0654 0.71 +1.2 648,211 + Dsui_0654 0.75 -0.3 648,225 + -1.1 648,226 - Dsui_0654 0.78 -0.8 648,274 + Dsui_0654 0.89 -0.2 648,282 - -0.2 648,399 + +0.3 648,421 - +0.1 648,421 - +0.9 648,423 + +0.6 648,448 + -0.2 648,497 + -0.0 648,505 - +0.1 648,582 + Dsui_0655 0.21 +0.8 648,592 + Dsui_0655 0.22 +0.1 648,600 - Dsui_0655 0.24 +0.5 648,622 + Dsui_0655 0.27 -0.3
Or see this region's nucleotide sequence