Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c10140

Experiment: m.b. Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.001 mg/ml
1,047,855	+		PGA1_c10130	0.46	+0.1
1,047,855	+		PGA1_c10130	0.46	-1.2
1,047,884	+		PGA1_c10130	0.47	-0.6
1,047,979	+		PGA1_c10130	0.52	-1.1
1,047,997	+		PGA1_c10130	0.53	-2.0
1,048,028	-		PGA1_c10130	0.55	+0.8
1,048,038	-		PGA1_c10130	0.56	-1.1
1,048,045	-		PGA1_c10130	0.56	+1.1
1,048,046	-		PGA1_c10130	0.56	+0.3
1,048,290	-		PGA1_c10130	0.69	-0.3
1,048,468	-		PGA1_c10130	0.79	-1.5
1,048,531	-		PGA1_c10130	0.83	-1.5
1,048,662	+		PGA1_c10130	0.90	-0.1
1,048,670	-				-1.0
1,048,670	-				+0.3
1,048,670	-				-1.8
1,048,670	-				+0.2
1,048,674	+				+0.8
1,048,678	+				-1.2
1,048,777	+				+2.4
1,048,809	-				+0.2
1,048,842	+				+0.3
1,048,982	+		PGA1_c10140	0.11	-0.6
1,048,990	-		PGA1_c10140	0.12	+0.4
1,048,990	-		PGA1_c10140	0.12	-1.3
1,049,019	+		PGA1_c10140	0.14	-0.4
1,049,027	-		PGA1_c10140	0.15	-1.0
1,049,027	-		PGA1_c10140	0.15	+0.3
1,049,041	+		PGA1_c10140	0.16	+0.7
1,049,099	+		PGA1_c10140	0.21	-0.4
1,049,099	+		PGA1_c10140	0.21	-0.2
1,049,102	-		PGA1_c10140	0.22	+0.6
1,049,109	+		PGA1_c10140	0.22	+0.6
1,049,125	-		PGA1_c10140	0.23	-1.8
1,049,126	+		PGA1_c10140	0.24	+0.1
1,049,134	-		PGA1_c10140	0.24	-1.4
1,049,153	-		PGA1_c10140	0.26	-0.4
1,049,219	+		PGA1_c10140	0.32	+0.2
1,049,227	-		PGA1_c10140	0.32	-0.5
1,049,351	-		PGA1_c10140	0.43	-0.4
1,049,406	-		PGA1_c10140	0.48	+0.8
1,049,413	+		PGA1_c10140	0.48	-1.0
1,049,413	+		PGA1_c10140	0.48	-3.2
1,049,421	-		PGA1_c10140	0.49	-0.3
1,049,459	+		PGA1_c10140	0.52	-2.3
1,049,467	-		PGA1_c10140	0.53	+0.9
1,049,515	-		PGA1_c10140	0.57	+0.8
1,049,534	-		PGA1_c10140	0.59	-0.7
1,049,546	-		PGA1_c10140	0.60	-0.0
1,049,546	-		PGA1_c10140	0.60	+0.0
1,049,566	+		PGA1_c10140	0.61	+0.1
1,049,571	-		PGA1_c10140	0.62	+0.3
1,049,587	-		PGA1_c10140	0.63	+0.3
1,049,595	+		PGA1_c10140	0.64	-1.2
1,049,595	+		PGA1_c10140	0.64	-1.4
1,049,603	+		PGA1_c10140	0.64	+0.3
1,049,603	-		PGA1_c10140	0.64	+0.0
1,049,623	-		PGA1_c10140	0.66	+0.2
1,049,726	-		PGA1_c10140	0.75	-0.6
1,049,745	-		PGA1_c10140	0.77	-1.2
1,049,786	+		PGA1_c10140	0.80	+0.1
1,049,839	+		PGA1_c10140	0.85	+0.4
1,049,908	-				+0.3
1,049,963	+				+0.4
1,049,963	+				+0.1
1,049,963	+				+0.3
1,049,971	-				-0.7
1,049,971	-				+0.8
1,050,026	-				+0.4
1,050,057	+				-0.6
1,050,057	+				+0.8
1,050,058	+				+0.9
1,050,060	-				+1.1
1,050,065	-				+0.1
1,050,065	-				-1.8
1,050,065	-				-0.5
1,050,132	+				-1.8
1,050,140	-				+0.1
1,050,159	+				-0.8
1,050,166	+				+0.8
1,050,174	-				+2.4
1,050,222	+				-1.4
1,050,230	-				+2.1
1,050,322	-				+1.4
1,050,324	+				-1.7
1,050,331	-				-0.5
1,050,332	-				-0.7
1,050,336	+				-1.3
1,050,336	+				+0.4
1,050,336	+				-0.3
1,050,342	-				-0.6
1,050,342	-				-0.1
1,050,374	+		PGA1_c10150	0.11	-0.0
1,050,398	-		PGA1_c10150	0.13	+0.3
1,050,409	-		PGA1_c10150	0.14	-0.2
1,050,449	+		PGA1_c10150	0.18	-0.4
1,050,457	-		PGA1_c10150	0.18	+1.2
1,050,457	-		PGA1_c10150	0.18	-0.7
1,050,457	-		PGA1_c10150	0.18	-0.6
1,050,478	+		PGA1_c10150	0.20	+3.3
1,050,500	-		PGA1_c10150	0.22	-0.7
1,050,516	+		PGA1_c10150	0.23	+0.2
1,050,524	-		PGA1_c10150	0.24	+2.9
1,050,533	-		PGA1_c10150	0.25	+1.5
1,050,572	+		PGA1_c10150	0.28	-1.2
1,050,713	-		PGA1_c10150	0.40	-1.1
1,050,733	-		PGA1_c10150	0.42	-0.6
1,050,795	-		PGA1_c10150	0.47	-0.2
1,050,931	-		PGA1_c10150	0.59	+0.2
1,050,972	+		PGA1_c10150	0.62	-0.8
1,050,980	-		PGA1_c10150	0.63	+0.7