Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c10020

Experiment: m.b. Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.001 mg/ml
1,034,311	+		PGA1_c10010	0.29	-1.3
1,034,311	+		PGA1_c10010	0.29	-0.5
1,034,319	-		PGA1_c10010	0.30	+0.6
1,034,319	-		PGA1_c10010	0.30	+0.7
1,034,365	+		PGA1_c10010	0.34	-0.3
1,034,398	+		PGA1_c10010	0.38	+0.4
1,034,400	+		PGA1_c10010	0.38	+1.2
1,034,404	+		PGA1_c10010	0.39	-0.7
1,034,404	+		PGA1_c10010	0.39	-0.8
1,034,412	-		PGA1_c10010	0.39	-0.2
1,034,433	+		PGA1_c10010	0.42	-0.0
1,034,436	+		PGA1_c10010	0.42	-0.7
1,034,444	-		PGA1_c10010	0.43	+2.7
1,034,468	+		PGA1_c10010	0.45	-1.5
1,034,507	-		PGA1_c10010	0.49	+0.7
1,034,507	-		PGA1_c10010	0.49	+0.8
1,034,547	+		PGA1_c10010	0.54	+1.8
1,034,623	+		PGA1_c10010	0.62	-1.5
1,034,623	+		PGA1_c10010	0.62	+0.5
1,034,623	+		PGA1_c10010	0.62	-0.5
1,034,623	+		PGA1_c10010	0.62	-0.1
1,034,623	+		PGA1_c10010	0.62	+0.2
1,034,623	+		PGA1_c10010	0.62	-0.4
1,034,623	+		PGA1_c10010	0.62	-0.6
1,034,623	+		PGA1_c10010	0.62	-0.5
1,034,631	-		PGA1_c10010	0.62	-0.8
1,034,631	-		PGA1_c10010	0.62	+0.2
1,034,709	-		PGA1_c10010	0.71	-0.1
1,034,709	-		PGA1_c10010	0.71	-0.9
1,034,709	-		PGA1_c10010	0.71	-0.8
1,034,709	-		PGA1_c10010	0.71	+0.1
1,034,709	-		PGA1_c10010	0.71	-0.5
1,034,709	-		PGA1_c10010	0.71	+0.5
1,034,709	-		PGA1_c10010	0.71	-1.2
1,034,710	-		PGA1_c10010	0.71	+0.3
1,034,723	-		PGA1_c10010	0.72	+0.3
1,034,742	-		PGA1_c10010	0.74	+1.5
1,034,747	-		PGA1_c10010	0.75	+0.2
1,034,756	-		PGA1_c10010	0.75	-0.2
1,034,761	-		PGA1_c10010	0.76	-0.9
1,034,763	+		PGA1_c10010	0.76	-1.2
1,034,782	-		PGA1_c10010	0.78	-1.0
1,034,793	+		PGA1_c10010	0.79	+2.4
1,034,803	+		PGA1_c10010	0.80	+1.5
1,034,816	+		PGA1_c10010	0.82	+0.1
1,034,825	-		PGA1_c10010	0.83	-1.0
1,034,827	-		PGA1_c10010	0.83	-0.0
1,034,829	-		PGA1_c10010	0.83	+0.4
1,034,842	-		PGA1_c10010	0.84	+0.4
1,034,842	-		PGA1_c10010	0.84	+1.2
1,034,900	+				+0.8
1,034,900	+				+0.9
1,034,908	-				+0.8
1,034,908	-				+1.6
1,034,908	-				-0.5
1,034,928	+				+0.3
1,034,928	+				+0.3
1,034,928	-				-0.2
1,034,987	-				-1.3
1,034,989	+				-0.0
1,034,989	+				-0.8
1,034,997	-				+0.5
1,034,997	-				+0.5
1,034,997	-				-0.9
1,034,997	-				-2.0
1,034,997	-				+1.2
1,034,997	-				-2.0
1,034,997	-				+0.4
1,034,997	-				-0.1
1,034,997	-				-1.4
1,034,997	-				+0.2
1,034,997	-				-0.3
1,034,997	-				-0.8
1,035,007	-				+0.3
1,035,007	-				-0.1
1,035,007	-				-1.5
1,035,012	-				+1.3
1,035,023	-				+0.2
1,035,086	-				-0.2
1,035,172	-				-1.3
1,035,186	+				-1.4
1,035,291	-				-0.3
1,035,342	-		PGA1_c10020	0.14	-0.3
1,035,401	+		PGA1_c10020	0.27	-1.4
1,035,401	+		PGA1_c10020	0.27	-2.7
1,035,409	-		PGA1_c10020	0.29	-0.7
1,035,472	+		PGA1_c10020	0.42	-1.2
1,035,478	+		PGA1_c10020	0.44	-0.9
1,035,486	-		PGA1_c10020	0.45	+0.5
1,035,486	-		PGA1_c10020	0.45	-0.7
1,035,495	+		PGA1_c10020	0.47	-0.2
1,035,543	-		PGA1_c10020	0.58	-1.5
1,035,634	+		PGA1_c10020	0.77	+0.8
1,035,696	+				-0.0
1,035,739	+				-0.2
1,035,855	+				-0.2
1,035,961	+				+0.1
1,036,029	-				+0.4
1,036,145	+		PGA1_c10030	0.17	+0.1
1,036,206	-		PGA1_c10030	0.21	+0.6
1,036,206	-		PGA1_c10030	0.21	-3.2
1,036,278	-		PGA1_c10030	0.26	+0.2
1,036,333	+		PGA1_c10030	0.29	+2.8
1,036,341	-		PGA1_c10030	0.30	+0.8
1,036,348	+		PGA1_c10030	0.30	+1.4
1,036,356	-		PGA1_c10030	0.31	-0.1
1,036,356	-		PGA1_c10030	0.31	-0.9
1,036,426	+		PGA1_c10030	0.35	-1.3
1,036,445	-		PGA1_c10030	0.36	-1.9
1,036,458	+		PGA1_c10030	0.37	+0.6
1,036,487	-		PGA1_c10030	0.39	+0.8
1,036,508	+		PGA1_c10030	0.40	-1.5
1,036,615	-		PGA1_c10030	0.47	-0.8
1,036,650	+		PGA1_c10030	0.49	+0.4
1,036,676	-		PGA1_c10030	0.51	-1.0
1,036,696	+		PGA1_c10030	0.52	-1.5
1,036,717	+		PGA1_c10030	0.54	+0.0