Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c34790

Experiment: m.b. Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.001 mg/ml
3,649,337	+		PGA1_c34770	0.66	+0.8
3,649,444	-		PGA1_c34770	0.83	+0.7
3,649,480	-		PGA1_c34770	0.88	-0.8
3,649,506	-				+0.7
3,649,532	+				-0.8
3,649,536	+				+0.8
3,649,567	+				-0.6
3,649,640	-				+0.5
3,649,647	+				-0.4
3,649,661	+				+0.5
3,649,662	+				-0.1
3,649,669	-				-0.5
3,650,212	+				+0.6
3,650,256	-				+0.1
3,650,256	-				-1.7
3,650,256	-				-0.4
3,650,298	+				-0.1
3,650,298	+				-0.6
3,650,321	-				+0.4
3,650,331	-				+0.6
3,650,331	-				-2.8
3,650,353	-				-1.2
3,650,360	+				+0.2
3,650,391	+		PGA1_c34790	0.13	-1.8
3,650,396	+		PGA1_c34790	0.14	+0.2
3,650,413	+		PGA1_c34790	0.17	-0.5
3,650,421	-		PGA1_c34790	0.18	+1.1
3,650,421	-		PGA1_c34790	0.18	-1.9
3,650,437	+		PGA1_c34790	0.22	-2.0
3,650,440	-		PGA1_c34790	0.22	-0.8
3,650,544	-		PGA1_c34790	0.42	-0.6
3,650,553	-		PGA1_c34790	0.44	-1.6
3,650,594	+		PGA1_c34790	0.52	-0.9
3,650,601	+		PGA1_c34790	0.53	+0.6
3,650,660	+		PGA1_c34790	0.65	-1.6
3,650,663	-		PGA1_c34790	0.65	-0.4
3,650,704	-		PGA1_c34790	0.73	-1.1
3,650,709	-		PGA1_c34790	0.74	-2.9
3,650,709	-		PGA1_c34790	0.74	-1.6
3,650,709	-		PGA1_c34790	0.74	-1.1
3,650,724	+		PGA1_c34790	0.77	-3.4
3,650,744	+		PGA1_c34790	0.81	-2.8
3,650,744	+		PGA1_c34790	0.81	-0.8
3,650,744	+		PGA1_c34790	0.81	-0.4
3,650,777	+		PGA1_c34790	0.87	-2.2
3,650,777	+		PGA1_c34790	0.87	-0.8
3,650,798	+				-0.9
3,650,798	+				-2.1
3,650,806	-				+0.6
3,650,806	-				-0.9
3,650,806	-				+0.2
3,650,806	-				-1.2
3,650,822	+				+0.4
3,650,822	+				-0.6
3,650,852	+				-2.4
3,650,860	-				-0.7
3,650,889	-				+0.3
3,650,929	+				-1.0
3,650,936	+				+0.4
3,650,936	+				-0.5
3,650,936	+				-1.1
3,650,936	+				+0.1
3,650,936	+				-2.6
3,650,936	+				-2.4
3,650,936	+				-0.5
3,650,936	+				+0.3
3,650,937	-				-0.3
3,650,944	-				-0.4
3,650,944	-				+0.6
3,650,944	-				+0.2
3,650,944	-				-0.6
3,650,944	-				+0.0
3,650,944	-				-0.0
3,650,944	-				-1.1
3,650,944	-				+0.5
3,650,957	-				+0.5
3,650,966	-				+0.6
3,651,009	+		PGA1_c34800	0.12	-0.9
3,651,013	+		PGA1_c34800	0.13	+0.4
3,651,053	+		PGA1_c34800	0.18	-0.4
3,651,053	+		PGA1_c34800	0.18	-0.4
3,651,053	+		PGA1_c34800	0.18	-0.7
3,651,061	-		PGA1_c34800	0.19	+1.2
3,651,069	+		PGA1_c34800	0.20	-0.3
3,651,069	+		PGA1_c34800	0.20	+0.2
3,651,069	-		PGA1_c34800	0.20	-0.7
3,651,076	+		PGA1_c34800	0.21	-1.1
3,651,077	-		PGA1_c34800	0.21	-0.1
3,651,077	-		PGA1_c34800	0.21	+0.2
3,651,092	-		PGA1_c34800	0.23	-0.4
3,651,115	-		PGA1_c34800	0.26	+0.1
3,651,119	+		PGA1_c34800	0.26	-2.3
3,651,154	-		PGA1_c34800	0.30	+1.9
3,651,201	+		PGA1_c34800	0.36	+0.6
3,651,232	-		PGA1_c34800	0.40	+0.8
3,651,295	-		PGA1_c34800	0.48	+0.3
3,651,322	+		PGA1_c34800	0.51	+0.6
3,651,328	+		PGA1_c34800	0.52	+1.0
3,651,330	-		PGA1_c34800	0.52	-0.6
3,651,330	-		PGA1_c34800	0.52	-1.4
3,651,337	-		PGA1_c34800	0.53	+0.7
3,651,419	+		PGA1_c34800	0.63	+1.1
3,651,462	+		PGA1_c34800	0.68	+0.9
3,651,462	-		PGA1_c34800	0.68	+0.5
3,651,462	-		PGA1_c34800	0.68	-1.4
3,651,470	-		PGA1_c34800	0.69	+1.1
3,651,470	-		PGA1_c34800	0.69	-0.6
3,651,566	+		PGA1_c34800	0.81	+0.4
3,651,566	+		PGA1_c34800	0.81	+0.9
3,651,613	-		PGA1_c34800	0.87	-0.9
3,651,627	+		PGA1_c34800	0.89	+0.4
3,651,636	-		PGA1_c34800	0.90	-0.5
3,651,657	-				-1.1
3,651,674	+				-0.8
3,651,709	+				-0.4
3,651,712	-				-0.2
3,651,728	-				+1.1
3,651,769	-				-0.6
3,651,788	+				-1.0
3,651,788	+				+1.6
3,651,788	+				-0.3
3,651,788	+				+1.2
3,651,788	+				-0.6
3,651,795	-				+0.0
3,651,796	-				+0.2
3,651,796	-				-1.6
3,651,796	-				+0.8
3,651,796	-				-0.4
3,651,796	-				+0.2
3,651,796	-				+1.2
3,651,796	-				-0.6
3,651,796	-				+1.4
3,651,796	-				+1.2
3,651,796	-				-0.2
3,651,796	-				+0.4
3,651,796	-				-1.2
3,651,796	-				+0.7
3,651,796	-				-0.1
3,651,796	-				-0.0
3,651,796	-				+1.3