Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31920

Experiment: m.b. Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.001 mg/ml
3,345,889	+		PGA1_c31900	0.81	+0.5
3,345,904	-		PGA1_c31900	0.82	-2.3
3,345,912	+		PGA1_c31900	0.82	-0.0
3,345,912	+		PGA1_c31900	0.82	-0.1
3,345,928	-		PGA1_c31900	0.83	+1.2
3,345,962	-		PGA1_c31900	0.85	+2.9
3,345,977	+		PGA1_c31900	0.85	-0.2
3,345,998	+		PGA1_c31900	0.86	-0.2
3,345,998	+		PGA1_c31900	0.86	+1.5
3,346,006	-		PGA1_c31900	0.87	-0.4
3,346,006	-		PGA1_c31900	0.87	+1.1
3,346,006	-		PGA1_c31900	0.87	-1.2
3,346,006	-		PGA1_c31900	0.87	-0.6
3,346,044	+		PGA1_c31900	0.89	+0.8
3,346,044	+		PGA1_c31900	0.89	-0.4
3,346,044	+		PGA1_c31900	0.89	+0.6
3,346,052	-		PGA1_c31900	0.89	+0.3
3,346,052	-		PGA1_c31900	0.89	-0.8
3,346,082	-				-0.1
3,346,128	+				+1.1
3,346,198	+				+0.1
3,346,206	-				-0.8
3,346,245	-				+2.2
3,346,279	+				+1.8
3,346,287	-				+0.8
3,346,360	-				+0.6
3,346,365	-				-0.3
3,346,408	-				+2.2
3,346,445	+				+1.4
3,346,471	-				+2.4
3,346,570	+		PGA1_c31910	0.41	-0.4
3,346,593	+		PGA1_c31910	0.49	+1.3
3,346,598	+		PGA1_c31910	0.51	+0.1
3,346,598	+		PGA1_c31910	0.51	-1.8
3,346,601	-		PGA1_c31910	0.52	+0.1
3,346,603	+		PGA1_c31910	0.52	+1.8
3,346,603	+		PGA1_c31910	0.52	-0.8
3,346,603	+		PGA1_c31910	0.52	+0.4
3,346,603	+		PGA1_c31910	0.52	+1.1
3,346,603	+		PGA1_c31910	0.52	-0.3
3,346,603	+		PGA1_c31910	0.52	+0.3
3,346,603	+		PGA1_c31910	0.52	+1.3
3,346,603	+		PGA1_c31910	0.52	-1.1
3,346,603	+		PGA1_c31910	0.52	+1.1
3,346,603	+		PGA1_c31910	0.52	-0.3
3,346,603	+		PGA1_c31910	0.52	+2.3
3,346,603	+		PGA1_c31910	0.52	-0.9
3,346,603	+		PGA1_c31910	0.52	+1.1
3,346,603	+		PGA1_c31910	0.52	-1.3
3,346,606	-		PGA1_c31910	0.53	+0.1
3,346,611	-		PGA1_c31910	0.55	+0.9
3,346,611	-		PGA1_c31910	0.55	-0.4
3,346,611	-		PGA1_c31910	0.55	+0.5
3,346,611	-		PGA1_c31910	0.55	-0.2
3,346,611	-		PGA1_c31910	0.55	+0.8
3,346,611	-		PGA1_c31910	0.55	-1.8
3,346,611	-		PGA1_c31910	0.55	-0.5
3,346,728	-				+1.0
3,346,773	-				-0.5
3,346,803	+				+0.1
3,346,823	-				+2.1
3,346,853	+				+0.1
3,346,853	+				-0.5
3,346,853	+				+1.9
3,346,855	+				+0.8
3,346,861	-				-0.3
3,346,861	-				-0.6
3,346,863	-				+0.1
3,346,893	+				+0.4
3,346,994	-		PGA1_c31920	0.21	+1.3
3,346,996	+		PGA1_c31920	0.21	+2.3
3,347,004	-		PGA1_c31920	0.22	+1.3
3,347,004	-		PGA1_c31920	0.22	+0.2
3,347,029	+		PGA1_c31920	0.27	+0.1
3,347,042	-		PGA1_c31920	0.29	+1.8
3,347,075	-		PGA1_c31920	0.34	-0.1
3,347,095	+		PGA1_c31920	0.38	+1.6
3,347,103	-		PGA1_c31920	0.39	+1.9
3,347,114	+		PGA1_c31920	0.41	+1.1
3,347,166	-		PGA1_c31920	0.50	+0.2
3,347,176	-		PGA1_c31920	0.52	-0.8
3,347,178	+		PGA1_c31920	0.52	+3.1
3,347,201	+		PGA1_c31920	0.56	-0.2
3,347,363	-		PGA1_c31920	0.83	-1.8
3,347,460	+				-0.7
3,347,460	+				-0.3
3,347,463	-				+0.1
3,347,480	+				+1.7
3,347,518	-				+1.3
3,347,569	-				-0.8
3,347,610	+				-0.1
3,347,610	-				+0.5
3,347,669	+				+0.6
3,347,678	-		PGA1_c31930	0.10	+2.5
3,347,679	-		PGA1_c31930	0.11	-0.7
3,347,685	+		PGA1_c31930	0.11	-0.5
3,347,705	+		PGA1_c31930	0.12	+0.1
3,347,705	+		PGA1_c31930	0.12	+0.5
3,347,705	+		PGA1_c31930	0.12	+0.6
3,347,705	+		PGA1_c31930	0.12	-0.1
3,347,705	+		PGA1_c31930	0.12	+0.8
3,347,713	-		PGA1_c31930	0.13	+1.2
3,347,713	-		PGA1_c31930	0.13	-1.9
3,347,727	+		PGA1_c31930	0.14	+0.5
3,347,727	-		PGA1_c31930	0.14	+1.2
3,347,737	+		PGA1_c31930	0.15	-2.4
3,347,750	-		PGA1_c31930	0.16	-0.5
3,347,878	+		PGA1_c31930	0.25	+0.8
3,347,886	-		PGA1_c31930	0.26	+1.1
3,347,890	+		PGA1_c31930	0.26	-0.7
3,347,891	-		PGA1_c31930	0.26	+0.1
3,347,971	-		PGA1_c31930	0.32	-0.1
3,348,075	-		PGA1_c31930	0.40	+0.6
3,348,085	+		PGA1_c31930	0.40	+0.1
3,348,124	+		PGA1_c31930	0.43	+1.6
3,348,143	+		PGA1_c31930	0.45	-0.5
3,348,145	+		PGA1_c31930	0.45	+0.8
3,348,153	-		PGA1_c31930	0.45	+0.3
3,348,156	+				+1.1
3,348,230	-		PGA1_c31930	0.51	-2.1
3,348,251	-		PGA1_c31930	0.52	+0.7
3,348,265	+		PGA1_c31930	0.53	+1.0
3,348,267	+		PGA1_c31930	0.54	+1.2
3,348,275	-		PGA1_c31930	0.54	+1.8
3,348,332	+		PGA1_c31930	0.58	-2.8
3,348,335	+		PGA1_c31930	0.59	+0.9
3,348,338	-		PGA1_c31930	0.59	-0.1
3,348,340	+		PGA1_c31930	0.59	+0.9
3,348,390	+		PGA1_c31930	0.63	-0.9
3,348,390	+		PGA1_c31930	0.63	-1.3
3,348,390	+		PGA1_c31930	0.63	+0.1
3,348,398	-		PGA1_c31930	0.63	+0.5
3,348,398	-		PGA1_c31930	0.63	-0.5
3,348,398	-		PGA1_c31930	0.63	+0.1
3,348,403	-		PGA1_c31930	0.64	+0.9