Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28780

Experiment: m.b. Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.001 mg/ml
3,016,837	+		PGA1_c28770	0.40	-0.4
3,016,845	-		PGA1_c28770	0.41	+0.9
3,016,863	+		PGA1_c28770	0.42	+0.5
3,016,872	-		PGA1_c28770	0.42	-1.1
3,016,876	-		PGA1_c28770	0.43	+0.9
3,016,912	+		PGA1_c28770	0.45	+3.5
3,016,938	+		PGA1_c28770	0.47	-0.0
3,016,938	+		PGA1_c28770	0.47	+0.5
3,016,963	+		PGA1_c28770	0.49	-0.3
3,016,971	-		PGA1_c28770	0.50	-0.3
3,016,971	-		PGA1_c28770	0.50	-0.7
3,016,971	-		PGA1_c28770	0.50	+1.9
3,016,971	-		PGA1_c28770	0.50	+0.9
3,016,984	-		PGA1_c28770	0.51	+2.5
3,016,986	-		PGA1_c28770	0.51	+1.7
3,017,043	+		PGA1_c28770	0.55	+0.8
3,017,045	+		PGA1_c28770	0.55	-0.7
3,017,051	-		PGA1_c28770	0.55	+1.5
3,017,117	+		PGA1_c28770	0.60	+1.6
3,017,158	-		PGA1_c28770	0.63	-0.9
3,017,165	-		PGA1_c28770	0.63	+0.2
3,017,165	-		PGA1_c28770	0.63	-1.7
3,017,165	-		PGA1_c28770	0.63	-0.1
3,017,165	-		PGA1_c28770	0.63	+1.3
3,017,208	+		PGA1_c28770	0.67	-0.4
3,017,270	-		PGA1_c28770	0.71	-1.1
3,017,284	+		PGA1_c28770	0.72	-1.1
3,017,314	-		PGA1_c28770	0.74	+1.1
3,017,321	-		PGA1_c28770	0.75	+2.9
3,017,403	+		PGA1_c28770	0.80	-1.4
3,017,411	-		PGA1_c28770	0.81	-1.1
3,017,436	+		PGA1_c28770	0.83	-0.1
3,017,446	+		PGA1_c28770	0.84	+1.3
3,017,446	+		PGA1_c28770	0.84	-1.7
3,017,539	+				+0.3
3,017,630	+				+0.0
3,017,633	-				-0.1
3,017,646	+				+1.6
3,017,779	-				+1.3
3,017,779	-				+1.5
3,017,779	-				+2.5
3,017,779	-				+2.5
3,017,779	-				-2.3
3,017,779	-				+0.9
3,017,791	-				+1.5
3,017,829	+				+0.8
3,017,829	+				+1.5
3,017,829	+				-0.1
3,017,837	-				-1.4
3,017,929	+		PGA1_c28780	0.24	+1.6
3,017,955	+		PGA1_c28780	0.29	+0.9
3,017,963	-		PGA1_c28780	0.30	+0.6
3,017,963	-		PGA1_c28780	0.30	+1.3
3,018,020	+		PGA1_c28780	0.40	+0.6
3,018,085	+		PGA1_c28780	0.51	+3.2
3,018,093	+		PGA1_c28780	0.52	+1.2
3,018,093	+		PGA1_c28780	0.52	+0.6
3,018,098	+		PGA1_c28780	0.53	+0.6
3,018,098	+		PGA1_c28780	0.53	+0.5
3,018,167	-		PGA1_c28780	0.65	-0.4
3,018,227	-		PGA1_c28780	0.75	-1.1
3,018,282	-		PGA1_c28780	0.85	+0.1
3,018,374	-				+2.5
3,018,377	+				+1.2
3,018,385	-				+0.9
3,018,385	-				+1.1
3,018,404	-				+0.9
3,018,456	+				-0.7
3,018,456	+				+0.9
3,018,477	-				-0.0
3,018,527	-				+1.5
3,018,553	+				-0.1
3,018,574	-				+1.2
3,018,574	-				+0.1
3,018,610	+		PGA1_c28790	0.12	-0.1
3,018,610	+		PGA1_c28790	0.12	+0.9
3,018,726	+		PGA1_c28790	0.23	-0.7
3,018,726	+		PGA1_c28790	0.23	-1.8
3,018,802	-		PGA1_c28790	0.30	+2.4
3,018,817	-		PGA1_c28790	0.32	+1.3
3,018,828	+		PGA1_c28790	0.33	+0.0
3,018,870	-		PGA1_c28790	0.37	+0.9
3,019,035	+		PGA1_c28790	0.53	+3.3
3,019,070	+		PGA1_c28790	0.56	+1.4
3,019,079	-		PGA1_c28790	0.57	+0.5
3,019,089	-		PGA1_c28790	0.58	+2.5
3,019,128	-		PGA1_c28790	0.62	-0.8
3,019,182	+		PGA1_c28790	0.67	-0.1
3,019,221	+		PGA1_c28790	0.71	-0.9
3,019,221	+		PGA1_c28790	0.71	-1.1
3,019,271	-		PGA1_c28790	0.76	+1.9
3,019,272	+		PGA1_c28790	0.76	+0.0
3,019,280	-		PGA1_c28790	0.77	+2.7
3,019,280	-		PGA1_c28790	0.77	+0.6
3,019,318	-		PGA1_c28790	0.80	+0.1
3,019,319	-		PGA1_c28790	0.81	+2.0
3,019,322	+		PGA1_c28790	0.81	+0.3
3,019,327	+		PGA1_c28790	0.81	+2.0
3,019,330	-		PGA1_c28790	0.82	+2.7
3,019,355	+		PGA1_c28790	0.84	-0.7
3,019,366	-		PGA1_c28790	0.85	+1.3