Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28470

Experiment: m.b. Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.001 mg/ml
2,976,641	+		PGA1_c28460	0.22	-0.1
2,976,649	-		PGA1_c28460	0.22	-1.8
2,976,734	-		PGA1_c28460	0.30	-0.8
2,976,752	+		PGA1_c28460	0.32	-0.6
2,976,778	-		PGA1_c28460	0.34	+1.8
2,976,806	+		PGA1_c28460	0.37	+0.1
2,976,814	-		PGA1_c28460	0.37	+0.3
2,976,819	-		PGA1_c28460	0.38	+0.0
2,976,839	-		PGA1_c28460	0.40	-0.2
2,976,843	+		PGA1_c28460	0.40	-2.2
2,976,860	-		PGA1_c28460	0.42	+2.6
2,976,878	-		PGA1_c28460	0.43	+0.4
2,976,891	-		PGA1_c28460	0.44	-1.1
2,976,952	+		PGA1_c28460	0.50	+0.3
2,976,957	+		PGA1_c28460	0.50	+0.5
2,976,964	+		PGA1_c28460	0.51	-0.2
2,976,965	-		PGA1_c28460	0.51	-0.5
2,977,027	+		PGA1_c28460	0.57	+1.2
2,977,103	+		PGA1_c28460	0.64	-0.6
2,977,103	+		PGA1_c28460	0.64	+0.5
2,977,111	-		PGA1_c28460	0.64	-1.4
2,977,170	+		PGA1_c28460	0.70	+1.4
2,977,191	-		PGA1_c28460	0.72	+1.9
2,977,261	-		PGA1_c28460	0.78	+1.7
2,977,298	+		PGA1_c28460	0.81	+0.6
2,977,298	+		PGA1_c28460	0.81	+0.2
2,977,306	-		PGA1_c28460	0.82	+0.8
2,977,306	-		PGA1_c28460	0.82	+0.9
2,977,306	-		PGA1_c28460	0.82	+2.1
2,977,306	-		PGA1_c28460	0.82	+0.5
2,977,310	+		PGA1_c28460	0.82	+0.2
2,977,318	-		PGA1_c28460	0.83	-0.4
2,977,318	-		PGA1_c28460	0.83	-0.5
2,977,352	+		PGA1_c28460	0.86	+1.1
2,977,369	+		PGA1_c28460	0.88	+1.8
2,977,377	+		PGA1_c28460	0.88	-0.2
2,977,385	-		PGA1_c28460	0.89	+1.7
2,977,484	+				+1.0
2,977,487	+				-0.2
2,977,489	+				+0.2
2,977,492	-				-2.8
2,977,553	+				-0.6
2,977,590	-				+1.8
2,977,590	-				-0.2
2,977,601	+				+0.4
2,977,619	-				+1.1
2,977,619	-				+0.2
2,977,697	+		PGA1_c28470	0.22	+0.9
2,977,705	-		PGA1_c28470	0.24	-1.0
2,977,705	-		PGA1_c28470	0.24	+0.2
2,977,732	-		PGA1_c28470	0.30	+0.9
2,977,741	+		PGA1_c28470	0.33	+1.1
2,977,749	-		PGA1_c28470	0.35	-0.7
2,977,749	-		PGA1_c28470	0.35	-0.8
2,977,792	-		PGA1_c28470	0.45	-1.2
2,977,819	+		PGA1_c28470	0.52	+2.2
2,977,827	-		PGA1_c28470	0.54	+0.1
2,977,827	-		PGA1_c28470	0.54	+0.4
2,977,827	-		PGA1_c28470	0.54	+1.4
2,977,862	-		PGA1_c28470	0.62	-0.3
2,977,864	+		PGA1_c28470	0.63	+1.3
2,977,864	+		PGA1_c28470	0.63	+0.8
2,977,867	-		PGA1_c28470	0.63	-0.5
2,977,881	+		PGA1_c28470	0.67	+0.4
2,977,888	+		PGA1_c28470	0.69	-0.8
2,977,888	+		PGA1_c28470	0.69	-0.2
2,977,889	-		PGA1_c28470	0.69	-1.0
2,977,906	-		PGA1_c28470	0.73	-0.8
2,977,906	-		PGA1_c28470	0.73	-0.2
2,977,949	+		PGA1_c28470	0.84	+1.1
2,977,949	+		PGA1_c28470	0.84	+2.8
2,977,949	+		PGA1_c28470	0.84	+1.1
2,977,949	+		PGA1_c28470	0.84	-0.3
2,977,949	+		PGA1_c28470	0.84	+1.1
2,977,949	+		PGA1_c28470	0.84	+0.2
2,977,949	+		PGA1_c28470	0.84	-0.8
2,977,949	+		PGA1_c28470	0.84	+0.4
2,977,949	+		PGA1_c28470	0.84	-1.2
2,977,949	+		PGA1_c28470	0.84	-1.8
2,977,949	+		PGA1_c28470	0.84	+0.8
2,977,957	-		PGA1_c28470	0.86	-0.5
2,977,957	-		PGA1_c28470	0.86	-3.4
2,977,957	-		PGA1_c28470	0.86	+1.3
2,977,957	-		PGA1_c28470	0.86	+1.6
2,977,957	-		PGA1_c28470	0.86	-0.8
2,977,957	-		PGA1_c28470	0.86	-1.5
2,977,957	-		PGA1_c28470	0.86	+0.6
2,977,957	-		PGA1_c28470	0.86	-0.8
2,977,957	-		PGA1_c28470	0.86	+1.1
2,977,957	-		PGA1_c28470	0.86	-1.2
2,977,957	-		PGA1_c28470	0.86	+2.0
2,977,957	-		PGA1_c28470	0.86	+0.5
2,977,957	-		PGA1_c28470	0.86	+0.8
2,978,018	-				-0.5
2,978,034	+				+1.1
2,978,037	+				+1.0
2,978,062	+				-0.8
2,978,090	+				-0.3
2,978,097	-				-1.3
2,978,097	-				-0.8
2,978,136	+				+0.6
2,978,144	-				+0.4
2,978,237	-				+1.2
2,978,241	+				+0.5
2,978,241	+				-0.8
2,978,241	+				+2.7
2,978,241	+				+0.4
2,978,242	-				+2.2
2,978,249	-				+1.0
2,978,249	-				+1.2
2,978,249	-				+0.5
2,978,418	+				-0.8
2,978,418	+				+1.1
2,978,418	+				+1.4
2,978,426	-				+2.0
2,978,500	+				+1.4
2,978,547	-				+0.0
2,978,564	+		PGA1_c28480	0.10	+1.1
2,978,619	+		PGA1_c28480	0.12	+2.3
2,978,619	+		PGA1_c28480	0.12	-0.2
2,978,619	+		PGA1_c28480	0.12	+1.6
2,978,627	-		PGA1_c28480	0.12	+0.4
2,978,627	-		PGA1_c28480	0.12	+0.2
2,978,627	-		PGA1_c28480	0.12	+1.2
2,978,627	-		PGA1_c28480	0.12	-0.0
2,978,627	-		PGA1_c28480	0.12	+0.8
2,978,627	-		PGA1_c28480	0.12	-2.4
2,978,627	-		PGA1_c28480	0.12	+0.8
2,978,627	-		PGA1_c28480	0.12	+1.0
2,978,627	-		PGA1_c28480	0.12	-1.0
2,978,627	-		PGA1_c28480	0.12	-1.2
2,978,627	-		PGA1_c28480	0.12	-0.2
2,978,635	+		PGA1_c28480	0.12	+0.8
2,978,635	-		PGA1_c28480	0.12	+0.4
2,978,650	+		PGA1_c28480	0.13	+0.2
2,978,658	-		PGA1_c28480	0.13	-0.8
2,978,691	-		PGA1_c28480	0.14	+0.6
2,978,691	-		PGA1_c28480	0.14	+0.9
2,978,691	-		PGA1_c28480	0.14	+1.1
2,978,691	-		PGA1_c28480	0.14	+0.3
2,978,797	-		PGA1_c28480	0.17	+0.4
2,978,822	+		PGA1_c28480	0.18	+0.8
2,978,835	-		PGA1_c28480	0.19	+1.1
2,978,915	-		PGA1_c28480	0.21	-0.8