Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c27690

Experiment: m.b. Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.001 mg/ml
2,885,069	+				-2.6
2,885,126	-		PGA1_c27680	0.11	-0.8
2,885,154	+		PGA1_c27680	0.15	+2.7
2,885,197	+		PGA1_c27680	0.21	+1.1
2,885,348	-		PGA1_c27680	0.43	-0.7
2,885,385	+		PGA1_c27680	0.48	-3.2
2,885,385	+		PGA1_c27680	0.48	+0.5
2,885,385	+		PGA1_c27680	0.48	-1.3
2,885,412	+		PGA1_c27680	0.52	+0.3
2,885,412	+		PGA1_c27680	0.52	+0.6
2,885,412	+		PGA1_c27680	0.52	-3.1
2,885,412	+		PGA1_c27680	0.52	+0.5
2,885,420	-		PGA1_c27680	0.53	-1.3
2,885,420	-		PGA1_c27680	0.53	-0.1
2,885,420	-		PGA1_c27680	0.53	-0.5
2,885,534	-		PGA1_c27680	0.69	-0.0
2,885,753	+				-0.6
2,885,758	-				+0.9
2,885,758	-				-0.1
2,885,758	-				-0.2
2,885,761	-				-0.1
2,885,773	+				-1.6
2,885,787	+				+0.4
2,885,820	+		PGA1_c27690	0.12	-1.0
2,885,828	-		PGA1_c27690	0.13	-1.3
2,885,830	+		PGA1_c27690	0.14	-0.4
2,885,853	+		PGA1_c27690	0.18	+1.0
2,885,922	-		PGA1_c27690	0.30	-1.3
2,885,980	+		PGA1_c27690	0.40	+0.8
2,885,980	+		PGA1_c27690	0.40	-3.1
2,885,983	-		PGA1_c27690	0.40	+0.0
2,885,983	-		PGA1_c27690	0.40	-1.4
2,885,983	-		PGA1_c27690	0.40	-0.1
2,885,988	-		PGA1_c27690	0.41	-2.6
2,885,988	-		PGA1_c27690	0.41	-0.9
2,885,988	-		PGA1_c27690	0.41	-1.4
2,885,999	-		PGA1_c27690	0.43	-1.4
2,886,003	-		PGA1_c27690	0.44	-1.9
2,886,033	+		PGA1_c27690	0.49	+0.1
2,886,041	-		PGA1_c27690	0.50	-0.9
2,886,054	+		PGA1_c27690	0.52	-1.7
2,886,062	-		PGA1_c27690	0.54	-3.2
2,886,062	-		PGA1_c27690	0.54	-1.0
2,886,062	-		PGA1_c27690	0.54	-0.5
2,886,090	-		PGA1_c27690	0.59	+1.0
2,886,100	+		PGA1_c27690	0.60	+0.7
2,886,108	-		PGA1_c27690	0.62	-0.3
2,886,126	-		PGA1_c27690	0.65	-0.3
2,886,200	+		PGA1_c27690	0.78	-0.9
2,886,247	+		PGA1_c27690	0.86	-0.7
2,886,260	-		PGA1_c27690	0.88	-1.8
2,886,270	+				+0.7
2,886,278	+				+0.8
2,886,297	+				+0.6
2,886,297	+				-0.4
2,886,297	+				+1.1
2,886,307	+				+0.4
2,886,317	-				+1.3
2,886,317	-				+0.7
2,886,325	-				-0.4
2,886,335	-				-0.6
2,886,335	-				-0.4
2,886,336	-				+1.5
2,886,336	-				+1.1
2,886,356	+				-1.4
2,886,356	+				+1.0
2,886,364	+				+0.7
2,886,367	+				-1.4
2,886,372	+				-0.0
2,886,372	-				+1.3
2,886,380	-				-1.3
2,886,454	-				-3.0
2,886,456	+				-0.4
2,886,456	+				-0.5
2,886,456	+				+0.6
2,886,456	+				-0.5
2,886,456	+				+0.1
2,886,456	+				-0.6
2,886,456	+				+1.9
2,886,464	-				-1.1
2,886,464	-				-1.3
2,886,464	-				+0.8
2,886,464	-				-0.3
2,886,464	-				-0.1
2,886,464	-				+0.4
2,886,502	+				+0.0
2,886,502	+				-1.3
2,886,503	+				-0.1
2,886,510	-				-0.7
2,886,510	-				-1.1
2,886,510	-				+0.7
2,886,510	-				+0.4
2,886,510	-				+0.3
2,886,511	-				+0.1
2,886,511	-				-0.6
2,886,511	-				+0.0
2,886,557	+				-0.3
2,886,565	-				-0.9
2,886,572	+				-0.8
2,886,572	+				+0.2
2,886,580	-				+0.9
2,886,580	-				-0.4
2,886,580	-				-2.3
2,886,593	+				-0.4
2,886,610	+				-0.4
2,886,639	+				+1.2
2,886,639	+				+0.2
2,886,649	+				-1.1
2,886,752	+				-0.5
2,886,752	+				-0.7
2,886,752	+				-3.3
2,886,752	+				-0.7
2,886,752	+				+0.7
2,886,752	+				+0.5
2,886,760	-				+0.6
2,886,760	-				+0.6
2,886,760	-				+0.7
2,886,760	-				+2.4
2,886,760	-				+0.9
2,886,760	-				-1.3
2,886,760	-				+0.6
2,886,762	+				-3.0
2,886,762	+				-0.9
2,886,762	+				+1.8
2,886,762	+				-0.3
2,886,765	-				+0.5
2,886,765	-				-0.2
2,886,767	+				+1.3
2,886,782	-				+0.7
2,886,782	-				+1.8
2,886,818	-				-0.0
2,886,820	+				-0.7
2,886,820	+				-3.3
2,886,820	+				+0.1
2,886,910	+		PGA1_c27700	0.12	+2.7
2,886,914	+		PGA1_c27700	0.12	-1.1
2,886,914	+		PGA1_c27700	0.12	-3.2
2,886,914	+		PGA1_c27700	0.12	-0.5
2,886,915	-		PGA1_c27700	0.12	-0.0
2,886,918	-		PGA1_c27700	0.12	-0.0
2,886,918	-		PGA1_c27700	0.12	+1.8
2,886,922	-		PGA1_c27700	0.12	+0.2
2,886,922	-		PGA1_c27700	0.12	+0.3
2,886,956	+		PGA1_c27700	0.14	+0.4
2,886,956	+		PGA1_c27700	0.14	-1.3
2,886,964	-		PGA1_c27700	0.14	-1.1
2,886,964	-		PGA1_c27700	0.14	+0.5
2,886,979	+		PGA1_c27700	0.15	-1.3
2,887,044	+		PGA1_c27700	0.19	-0.5
2,887,057	-		PGA1_c27700	0.19	-1.6
2,887,077	-		PGA1_c27700	0.20	-0.1
2,887,106	+		PGA1_c27700	0.22	-0.0
2,887,106	+		PGA1_c27700	0.22	-0.1
2,887,114	-		PGA1_c27700	0.22	+0.3
2,887,168	-		PGA1_c27700	0.25	-0.6
2,887,191	+		PGA1_c27700	0.26	-0.9
2,887,191	+		PGA1_c27700	0.26	-2.3
2,887,191	+		PGA1_c27700	0.26	+0.5
2,887,199	-		PGA1_c27700	0.27	+0.7