Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c27410

Experiment: m.b. Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.001 mg/ml
2,855,070	+				-0.8
2,855,077	+				-0.5
2,855,114	+		PGA1_c27400	0.11	-0.0
2,855,298	+		PGA1_c27400	0.29	+0.3
2,855,306	-		PGA1_c27400	0.30	+1.0
2,855,310	+		PGA1_c27400	0.30	+0.5
2,855,310	+		PGA1_c27400	0.30	-0.5
2,855,363	-		PGA1_c27400	0.35	-0.2
2,855,379	+		PGA1_c27400	0.37	-0.3
2,855,397	-		PGA1_c27400	0.39	-2.2
2,855,572	+		PGA1_c27400	0.56	-0.9
2,855,580	-		PGA1_c27400	0.57	-1.1
2,855,641	+		PGA1_c27400	0.62	+0.7
2,855,641	+		PGA1_c27400	0.62	-0.0
2,855,847	+		PGA1_c27400	0.83	-0.6
2,855,848	+		PGA1_c27400	0.83	+0.6
2,855,855	-		PGA1_c27400	0.83	-1.5
2,855,863	+		PGA1_c27400	0.84	-0.1
2,855,871	-		PGA1_c27400	0.85	-0.3
2,855,897	-		PGA1_c27400	0.87	+0.1
2,855,924	-				+0.3
2,855,991	-				+1.3
2,856,075	+				+1.0
2,856,075	+				-1.3
2,856,075	+				-0.1
2,856,075	+				-1.7
2,856,075	+				-2.1
2,856,075	+				+0.2
2,856,083	-				-0.8
2,856,083	-				+1.1
2,856,083	-				-0.2
2,856,083	-				+0.3
2,856,093	-				-1.2
2,856,111	+				-1.5
2,856,149	-		PGA1_c27410	0.14	-0.5
2,856,149	-		PGA1_c27410	0.14	-0.9
2,856,212	+		PGA1_c27410	0.20	+1.3
2,856,220	-		PGA1_c27410	0.21	-0.3
2,856,232	+		PGA1_c27410	0.22	-0.1
2,856,232	+		PGA1_c27410	0.22	+1.0
2,856,232	+		PGA1_c27410	0.22	-0.9
2,856,232	+		PGA1_c27410	0.22	+0.6
2,856,240	-		PGA1_c27410	0.23	+1.1
2,856,251	+		PGA1_c27410	0.24	-0.5
2,856,251	+		PGA1_c27410	0.24	-0.3
2,856,251	+		PGA1_c27410	0.24	-0.9
2,856,251	+		PGA1_c27410	0.24	+0.6
2,856,251	+		PGA1_c27410	0.24	-0.4
2,856,259	-		PGA1_c27410	0.25	+0.4
2,856,295	-		PGA1_c27410	0.28	-0.0
2,856,327	+		PGA1_c27410	0.32	-1.3
2,856,488	+		PGA1_c27410	0.48	-1.2
2,856,496	-		PGA1_c27410	0.49	+0.0
2,856,521	+		PGA1_c27410	0.51	+0.2
2,856,521	+		PGA1_c27410	0.51	-1.2
2,856,521	+		PGA1_c27410	0.51	-1.9
2,856,521	+		PGA1_c27410	0.51	-1.9
2,856,529	-		PGA1_c27410	0.52	-2.0
2,856,531	+		PGA1_c27410	0.52	+0.1
2,856,531	+		PGA1_c27410	0.52	+0.7
2,856,531	+		PGA1_c27410	0.52	+0.3
2,856,531	+		PGA1_c27410	0.52	-3.0
2,856,531	+		PGA1_c27410	0.52	+0.1
2,856,531	+		PGA1_c27410	0.52	-1.0
2,856,531	+		PGA1_c27410	0.52	+0.1
2,856,531	+		PGA1_c27410	0.52	-0.8
2,856,531	+		PGA1_c27410	0.52	-0.1
2,856,536	+		PGA1_c27410	0.53	-0.4
2,856,536	+		PGA1_c27410	0.53	-0.3
2,856,539	-		PGA1_c27410	0.53	+0.1
2,856,539	-		PGA1_c27410	0.53	+0.1
2,856,539	-		PGA1_c27410	0.53	+0.1
2,856,539	-		PGA1_c27410	0.53	-1.7
2,856,539	-		PGA1_c27410	0.53	+0.1
2,856,539	-		PGA1_c27410	0.53	-0.7
2,856,544	-		PGA1_c27410	0.54	+0.2
2,856,589	+		PGA1_c27410	0.58	-1.0
2,856,589	-		PGA1_c27410	0.58	+0.8
2,856,589	-		PGA1_c27410	0.58	+0.6
2,856,589	-		PGA1_c27410	0.58	+0.8
2,856,623	+		PGA1_c27410	0.62	+0.2
2,856,633	-		PGA1_c27410	0.63	+0.3
2,856,705	+		PGA1_c27410	0.70	-0.0
2,856,740	-		PGA1_c27410	0.73	-0.7
2,856,794	+		PGA1_c27410	0.79	-0.5
2,856,802	-		PGA1_c27410	0.80	+0.4
2,856,887	-		PGA1_c27410	0.88	-3.4
2,856,903	-		PGA1_c27410	0.90	-2.7
2,856,907	-				+1.4
2,856,909	+				+0.6
2,856,946	-				+0.7
2,856,976	-				-0.9
2,857,016	+				-1.5
2,857,052	+				-0.0
2,857,098	+				-0.3
2,857,191	-				+0.1
2,857,193	+				+0.0
2,857,196	-				+0.1
2,857,201	-				-0.9
2,857,212	-				-1.3
2,857,222	-				-0.9
2,857,239	+				-0.6
2,857,247	-				+0.9
2,857,247	-				-0.9
2,857,304	+		PGA1_c27420	0.15	-0.1
2,857,530	-		PGA1_c27420	0.39	+0.4
2,857,543	+		PGA1_c27420	0.40	+1.0
2,857,551	-		PGA1_c27420	0.41	-0.5
2,857,585	+		PGA1_c27420	0.44	-1.6
2,857,593	-		PGA1_c27420	0.45	-1.0
2,857,671	+		PGA1_c27420	0.53	+1.1
2,857,678	-		PGA1_c27420	0.54	-1.2
2,857,830	+		PGA1_c27420	0.70	+0.1
2,857,830	+		PGA1_c27420	0.70	-0.1
2,857,830	+		PGA1_c27420	0.70	+0.2
2,857,911	+		PGA1_c27420	0.78	+0.7
2,857,911	+		PGA1_c27420	0.78	-1.3
2,857,911	+		PGA1_c27420	0.78	-0.8
2,857,916	+		PGA1_c27420	0.79	-1.0
2,857,919	-		PGA1_c27420	0.79	+0.6
2,857,919	-		PGA1_c27420	0.79	-0.9
2,857,924	-		PGA1_c27420	0.80	+0.1
2,857,928	+		PGA1_c27420	0.80	-0.1
2,857,928	+		PGA1_c27420	0.80	+0.3
2,857,928	+		PGA1_c27420	0.80	-2.3
2,857,928	+		PGA1_c27420	0.80	+1.5
2,857,938	-		PGA1_c27420	0.81	-1.1