Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c21610

Experiment: m.b. Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.001 mg/ml
2,238,660	+				+0.3
2,238,811	+		PGA1_c21610	0.11	+0.1
2,238,833	+		PGA1_c21610	0.12	-0.4
2,238,878	-		PGA1_c21610	0.15	-0.2
2,238,886	-		PGA1_c21610	0.16	+0.2
2,238,928	+		PGA1_c21610	0.19	+0.3
2,238,928	-		PGA1_c21610	0.19	-0.9
2,238,928	-		PGA1_c21610	0.19	-0.1
2,238,929	+		PGA1_c21610	0.19	-1.4
2,238,946	-		PGA1_c21610	0.20	+0.5
2,238,994	-		PGA1_c21610	0.23	+0.4
2,239,027	+		PGA1_c21610	0.26	+0.8
2,239,036	+		PGA1_c21610	0.26	+1.0
2,239,043	+		PGA1_c21610	0.27	+1.2
2,239,051	-		PGA1_c21610	0.27	+1.4
2,239,130	-		PGA1_c21610	0.33	-0.2
2,239,130	-		PGA1_c21610	0.33	-0.9
2,239,167	+		PGA1_c21610	0.35	-0.2
2,239,177	+		PGA1_c21610	0.36	-0.6
2,239,185	-		PGA1_c21610	0.36	-0.6
2,239,221	+		PGA1_c21610	0.39	-1.6
2,239,240	+		PGA1_c21610	0.40	-2.5
2,239,265	+		PGA1_c21610	0.42	+0.5
2,239,299	-		PGA1_c21610	0.44	-1.9
2,239,342	+		PGA1_c21610	0.47	-2.7
2,239,350	-		PGA1_c21610	0.48	-0.4
2,239,367	-		PGA1_c21610	0.49	-0.5
2,239,369	-		PGA1_c21610	0.49	-0.8
2,239,369	-		PGA1_c21610	0.49	+0.0
2,239,412	-		PGA1_c21610	0.52	+0.1
2,239,418	+		PGA1_c21610	0.53	-0.2
2,239,420	+		PGA1_c21610	0.53	+0.6
2,239,426	-		PGA1_c21610	0.53	+0.2
2,239,426	-		PGA1_c21610	0.53	-2.8
2,239,455	+		PGA1_c21610	0.55	-1.8
2,239,496	-		PGA1_c21610	0.58	-2.2
2,239,514	+		PGA1_c21610	0.59	-0.5
2,239,594	+		PGA1_c21610	0.65	-1.7
2,239,594	+		PGA1_c21610	0.65	-0.7
2,239,602	-		PGA1_c21610	0.65	+0.9
2,239,674	-		PGA1_c21610	0.70	-2.4
2,239,695	-		PGA1_c21610	0.72	+0.2
2,239,741	-		PGA1_c21610	0.75	-1.1
2,239,814	-		PGA1_c21610	0.80	-0.4
2,239,890	+		PGA1_c21610	0.85	-0.3
2,239,984	-				+1.8
2,240,050	+				+0.6
2,240,050	+				+0.6
2,240,050	+				+0.2
2,240,058	-				+0.3
2,240,137	+				+0.5
2,240,208	+				+0.3
2,240,264	+				+0.1
2,240,291	+		PGA1_c21620	0.11	+0.6
2,240,291	+		PGA1_c21620	0.11	-0.4
2,240,304	-		PGA1_c21620	0.12	-0.6
2,240,328	+		PGA1_c21620	0.14	-1.7
2,240,328	+		PGA1_c21620	0.14	-0.1
2,240,328	+		PGA1_c21620	0.14	+0.7
2,240,328	+		PGA1_c21620	0.14	-0.0
2,240,328	+		PGA1_c21620	0.14	-2.8
2,240,336	-		PGA1_c21620	0.15	+0.1
2,240,336	-		PGA1_c21620	0.15	+0.3
2,240,336	-		PGA1_c21620	0.15	-1.5
2,240,343	+		PGA1_c21620	0.16	-1.4
2,240,372	-		PGA1_c21620	0.18	-1.4
2,240,389	+		PGA1_c21620	0.19	-1.4
2,240,427	-		PGA1_c21620	0.23	-0.8
2,240,432	+		PGA1_c21620	0.23	+0.1
2,240,442	+		PGA1_c21620	0.24	+1.3
2,240,450	-		PGA1_c21620	0.25	-0.5
2,240,521	-		PGA1_c21620	0.30	-0.5
2,240,521	-		PGA1_c21620	0.30	-0.8
2,240,540	+		PGA1_c21620	0.32	+0.2
2,240,595	-		PGA1_c21620	0.36	+1.5
2,240,635	+		PGA1_c21620	0.40	+1.0
2,240,641	-		PGA1_c21620	0.40	+0.0
2,240,671	+		PGA1_c21620	0.43	+0.2
2,240,717	-		PGA1_c21620	0.47	-0.9
2,240,792	+		PGA1_c21620	0.53	-0.5
2,240,797	+		PGA1_c21620	0.53	+0.4
2,240,800	-		PGA1_c21620	0.53	+1.2
2,240,805	-		PGA1_c21620	0.54	+3.6
2,240,806	-		PGA1_c21620	0.54	-0.2
2,240,823	-		PGA1_c21620	0.55	-0.1
2,240,824	-		PGA1_c21620	0.55	+0.0
2,240,824	-		PGA1_c21620	0.55	+0.2
2,240,835	-		PGA1_c21620	0.56	-1.0
2,240,866	+		PGA1_c21620	0.59	+0.8
2,240,881	+		PGA1_c21620	0.60	+0.2
2,240,881	+		PGA1_c21620	0.60	+0.2
2,240,881	+		PGA1_c21620	0.60	-0.2
2,240,881	+		PGA1_c21620	0.60	+0.5
2,240,881	+		PGA1_c21620	0.60	-0.1
2,240,889	-		PGA1_c21620	0.61	-0.2
2,240,889	-		PGA1_c21620	0.61	-0.9
2,240,889	-		PGA1_c21620	0.61	+0.5
2,240,889	-		PGA1_c21620	0.61	-0.4
2,240,889	-		PGA1_c21620	0.61	-1.1
2,240,908	-		PGA1_c21620	0.62	+1.8
2,240,965	+		PGA1_c21620	0.67	+0.3
2,240,965	+		PGA1_c21620	0.67	-0.6
2,241,001	+		PGA1_c21620	0.70	+1.5
2,241,016	+		PGA1_c21620	0.71	-0.8
2,241,016	+		PGA1_c21620	0.71	+0.1
2,241,024	-		PGA1_c21620	0.72	-2.5
2,241,024	-		PGA1_c21620	0.72	-0.9
2,241,058	+		PGA1_c21620	0.75	-0.2
2,241,058	+		PGA1_c21620	0.75	-0.4
2,241,058	+		PGA1_c21620	0.75	+0.1