Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c17730

Experiment: m.b. Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.001 mg/ml
1,856,905	+		PGA1_c17710	0.87	+0.1
1,856,958	+		PGA1_c17710	0.88	-0.4
1,857,013	-		PGA1_c17710	0.89	-0.4
1,857,020	+		PGA1_c17710	0.90	+0.1
1,857,020	+		PGA1_c17710	0.90	-0.9
1,857,020	+		PGA1_c17710	0.90	+1.4
1,857,028	-		PGA1_c17710	0.90	+0.6
1,857,028	-		PGA1_c17710	0.90	+0.6
1,857,028	-		PGA1_c17710	0.90	-0.9
1,857,056	-				-0.1
1,857,099	+				+0.6
1,857,107	-				+1.0
1,857,107	-				-1.5
1,857,191	+				+0.8
1,857,203	+				+0.6
1,857,276	-				+0.2
1,857,277	-				-0.6
1,857,376	+				-1.7
1,857,429	+				-0.9
1,857,433	+				+0.8
1,857,443	-				+0.4
1,857,446	-				+0.2
1,857,521	+		PGA1_c17720	0.20	+0.6
1,857,653	+		PGA1_c17720	0.49	+2.2
1,857,715	-		PGA1_c17720	0.63	-0.9
1,857,729	+		PGA1_c17720	0.66	+0.6
1,857,737	-		PGA1_c17720	0.68	+1.1
1,857,761	+		PGA1_c17720	0.73	+1.5
1,857,775	+		PGA1_c17720	0.76	+1.1
1,857,793	-		PGA1_c17720	0.80	+2.2
1,857,900	+				-0.9
1,858,037	+		PGA1_c17730	0.15	+3.1
1,858,076	-		PGA1_c17730	0.19	+1.6
1,858,195	+		PGA1_c17730	0.31	-0.4
1,858,203	-		PGA1_c17730	0.32	-1.3
1,858,204	-		PGA1_c17730	0.32	+2.0
1,858,211	+		PGA1_c17730	0.33	-1.7
1,858,217	-		PGA1_c17730	0.33	+0.6
1,858,217	-		PGA1_c17730	0.33	+1.4
1,858,219	-		PGA1_c17730	0.34	+0.6
1,858,280	+				+0.6
1,858,312	+		PGA1_c17730	0.43	+1.6
1,858,320	-		PGA1_c17730	0.44	+1.6
1,858,320	-		PGA1_c17730	0.44	-0.4
1,858,328	-		PGA1_c17730	0.45	-1.2
1,858,441	+		PGA1_c17730	0.57	+0.6
1,858,479	-		PGA1_c17730	0.61	+1.6
1,858,518	-		PGA1_c17730	0.65	+0.6
1,858,540	+		PGA1_c17730	0.67	+0.1
1,858,571	-		PGA1_c17730	0.71	+3.4
1,858,645	+		PGA1_c17730	0.78	+1.1
1,858,645	+				-0.4
1,858,669	-		PGA1_c17730	0.81	+1.6
1,858,674	-		PGA1_c17730	0.81	+0.6
1,858,713	+		PGA1_c17730	0.86	-0.9
1,858,912	+				+0.3
1,858,912	+				+1.9
1,858,921	-		PGA1_c17740	0.11	+2.4
1,859,037	-		PGA1_c17740	0.30	+1.0
1,859,046	+		PGA1_c17740	0.31	+1.6
1,859,056	+		PGA1_c17740	0.33	+2.6
1,859,066	+		PGA1_c17740	0.34	-1.4
1,859,066	+		PGA1_c17740	0.34	-0.9
1,859,079	+		PGA1_c17740	0.36	+1.1
1,859,083	+		PGA1_c17740	0.37	+1.8
1,859,093	+		PGA1_c17740	0.39	-0.4
1,859,258	+		PGA1_c17740	0.65	+0.6
1,859,263	+		PGA1_c17740	0.65	+1.1
1,859,310	+		PGA1_c17740	0.73	+1.1
1,859,334	-		PGA1_c17740	0.77	+1.6
1,859,334	-		PGA1_c17740	0.77	-1.4
1,859,371	+		PGA1_c17740	0.82	-0.9
1,859,379	+		PGA1_c17740	0.84	-0.6
1,859,387	-		PGA1_c17740	0.85	+0.3
1,859,530	+				-0.4
1,859,550	+				+0.6
1,859,550	+				+0.6
1,859,609	-		PGA1_c17750	0.17	-0.9
1,859,609	-		PGA1_c17750	0.17	-1.4
1,859,629	-		PGA1_c17750	0.20	-1.4
1,859,676	+		PGA1_c17750	0.27	+0.6
1,859,684	-		PGA1_c17750	0.28	-0.4
1,859,684	-		PGA1_c17750	0.28	+0.3
1,859,684	-		PGA1_c17750	0.28	-0.0
1,859,695	-		PGA1_c17750	0.30	-0.9
1,859,821	-		PGA1_c17750	0.49	+3.2