Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c16310

Experiment: m.b. Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.001 mg/ml
1,692,525	+				+1.6
1,692,536	+				-0.8
1,692,617	-				-1.6
1,692,624	+				-0.9
1,692,641	+				+0.5
1,692,681	-		PGA1_c16300	0.11	+1.2
1,692,688	+		PGA1_c16300	0.12	-0.6
1,692,855	+		PGA1_c16300	0.32	+0.5
1,692,932	+		PGA1_c16300	0.41	-0.1
1,692,955	+		PGA1_c16300	0.43	+0.1
1,692,955	+		PGA1_c16300	0.43	-2.8
1,692,956	+		PGA1_c16300	0.44	+0.4
1,692,964	-		PGA1_c16300	0.44	-0.8
1,692,970	-		PGA1_c16300	0.45	-0.7
1,692,975	-		PGA1_c16300	0.46	+0.1
1,692,995	+		PGA1_c16300	0.48	-1.6
1,693,018	+		PGA1_c16300	0.51	+0.2
1,693,053	+		PGA1_c16300	0.55	-1.1
1,693,053	+		PGA1_c16300	0.55	+0.7
1,693,152	+		PGA1_c16300	0.66	+0.2
1,693,153	-		PGA1_c16300	0.67	-0.6
1,693,194	+		PGA1_c16300	0.71	-1.0
1,693,194	+		PGA1_c16300	0.71	-1.6
1,693,207	-		PGA1_c16300	0.73	+0.7
1,693,229	-		PGA1_c16300	0.75	-0.6
1,693,280	+		PGA1_c16300	0.81	-3.2
1,693,306	+		PGA1_c16300	0.84	-0.2
1,693,321	+		PGA1_c16300	0.86	-1.0
1,693,329	-		PGA1_c16300	0.87	+0.7
1,693,329	-		PGA1_c16300	0.87	-3.0
1,693,334	-		PGA1_c16300	0.88	+0.8
1,693,430	+				-0.0
1,693,483	-				-0.5
1,693,544	+		PGA1_c16310	0.14	-0.9
1,693,544	+		PGA1_c16310	0.14	-0.9
1,693,658	-		PGA1_c16310	0.29	+1.3
1,693,662	-		PGA1_c16310	0.30	-1.5
1,693,677	+		PGA1_c16310	0.32	-0.3
1,693,677	+		PGA1_c16310	0.32	-1.9
1,693,715	-		PGA1_c16310	0.37	-0.9
1,693,804	-		PGA1_c16310	0.48	-0.5
1,693,827	+		PGA1_c16310	0.51	+0.9
1,693,912	+		PGA1_c16310	0.63	+1.3
1,694,068	-		PGA1_c16310	0.83	+0.1
1,694,114	-		PGA1_c16310	0.89	-2.3
1,694,130	+				-1.1
1,694,135	+				+0.8
1,694,153	+				-0.8
1,694,187	+				+1.4
1,694,195	-				-3.0
1,694,240	+				+0.4
1,694,248	-				-0.2
1,694,253	+				-0.4
1,694,376	+				+1.5
1,694,386	+				-0.2
1,694,386	+				+0.7
1,694,394	-				-0.4
1,694,394	-				+1.5
1,694,400	+				+1.2
1,694,598	-		PGA1_c16320	0.21	+0.3
1,694,601	+		PGA1_c16320	0.21	+0.3
1,694,606	+		PGA1_c16320	0.21	+0.8
1,694,618	+		PGA1_c16320	0.22	+0.6
1,694,699	+		PGA1_c16320	0.28	-0.5
1,694,704	+		PGA1_c16320	0.28	+0.4
1,694,707	-		PGA1_c16320	0.28	-0.9
1,694,707	-		PGA1_c16320	0.28	-0.0
1,694,709	+		PGA1_c16320	0.28	+0.7
1,694,709	+		PGA1_c16320	0.28	+0.4
1,694,709	+		PGA1_c16320	0.28	+0.7
1,694,709	+		PGA1_c16320	0.28	-0.1
1,694,709	+		PGA1_c16320	0.28	+0.4
1,694,709	+		PGA1_c16320	0.28	-1.4
1,694,709	+		PGA1_c16320	0.28	-1.1
1,694,717	-		PGA1_c16320	0.29	+1.1
1,694,717	-		PGA1_c16320	0.29	-0.9
1,694,717	-		PGA1_c16320	0.29	-1.0
1,694,717	-		PGA1_c16320	0.29	+1.4
1,694,717	-		PGA1_c16320	0.29	+0.2
1,694,717	-		PGA1_c16320	0.29	-0.5
1,694,717	-		PGA1_c16320	0.29	-0.7
1,694,717	-		PGA1_c16320	0.29	+0.0
1,694,717	-		PGA1_c16320	0.29	+1.5
1,694,717	-		PGA1_c16320	0.29	+1.3
1,694,717	-		PGA1_c16320	0.29	+0.1
1,694,717	-		PGA1_c16320	0.29	+0.8
1,694,717	-		PGA1_c16320	0.29	+0.7
1,694,717	-		PGA1_c16320	0.29	+2.7
1,694,717	-		PGA1_c16320	0.29	-0.1
1,694,732	-		PGA1_c16320	0.30	+0.1
1,694,798	-		PGA1_c16320	0.34	-2.8
1,694,839	+		PGA1_c16320	0.37	-0.7
1,694,880	+		PGA1_c16320	0.40	-0.7
1,694,960	+		PGA1_c16320	0.45	+0.3
1,694,968	-		PGA1_c16320	0.46	+0.7
1,694,968	-		PGA1_c16320	0.46	-1.3
1,694,968	-		PGA1_c16320	0.46	-0.4
1,694,977	+		PGA1_c16320	0.46	+0.2
1,694,977	+		PGA1_c16320	0.46	-0.3
1,695,102	+		PGA1_c16320	0.55	+0.5
1,695,119	+		PGA1_c16320	0.56	+0.1
1,695,152	+		PGA1_c16320	0.58	+1.3