Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c16280

Experiment: m.b. Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.001 mg/ml
1,689,612	+		PGA1_c16270	0.38	-1.1
1,689,613	+		PGA1_c16270	0.38	-0.1
1,689,655	+		PGA1_c16270	0.41	-2.4
1,689,663	-		PGA1_c16270	0.42	-0.5
1,689,787	+		PGA1_c16270	0.49	-0.6
1,689,787	+		PGA1_c16270	0.49	-0.6
1,689,829	+		PGA1_c16270	0.52	+2.8
1,689,837	-		PGA1_c16270	0.52	-0.9
1,689,858	+		PGA1_c16270	0.54	+0.5
1,689,889	+		PGA1_c16270	0.56	-2.3
1,689,897	-		PGA1_c16270	0.56	-0.0
1,689,897	-		PGA1_c16270	0.56	+1.2
1,689,899	+		PGA1_c16270	0.56	+2.1
1,689,904	+		PGA1_c16270	0.57	+0.4
1,689,906	+		PGA1_c16270	0.57	+0.7
1,689,906	+		PGA1_c16270	0.57	-1.3
1,689,906	+		PGA1_c16270	0.57	+0.9
1,689,906	+		PGA1_c16270	0.57	+0.7
1,689,906	+		PGA1_c16270	0.57	-1.1
1,689,907	-		PGA1_c16270	0.57	+0.1
1,689,907	-		PGA1_c16270	0.57	-0.1
1,689,907	-		PGA1_c16270	0.57	+0.3
1,689,907	-		PGA1_c16270	0.57	-0.1
1,689,914	-		PGA1_c16270	0.57	-1.3
1,689,926	+		PGA1_c16270	0.58	+1.5
1,690,058	+		PGA1_c16270	0.66	+0.8
1,690,066	-		PGA1_c16270	0.67	+0.6
1,690,066	-		PGA1_c16270	0.67	+2.0
1,690,130	-		PGA1_c16270	0.71	+1.3
1,690,180	-		PGA1_c16270	0.74	-1.1
1,690,180	-		PGA1_c16270	0.74	-0.0
1,690,189	+		PGA1_c16270	0.74	+0.8
1,690,189	+		PGA1_c16270	0.74	-1.6
1,690,189	+		PGA1_c16270	0.74	+0.3
1,690,189	+		PGA1_c16270	0.74	+1.6
1,690,267	+		PGA1_c16270	0.79	+1.2
1,690,274	-		PGA1_c16270	0.80	-0.4
1,690,276	+		PGA1_c16270	0.80	+0.7
1,690,276	+		PGA1_c16270	0.80	+0.4
1,690,279	-		PGA1_c16270	0.80	+0.0
1,690,284	-		PGA1_c16270	0.80	+1.4
1,690,284	-		PGA1_c16270	0.80	+1.2
1,690,299	+		PGA1_c16270	0.81	+0.3
1,690,299	+		PGA1_c16270	0.81	+0.2
1,690,358	-		PGA1_c16270	0.85	-0.8
1,690,376	-		PGA1_c16270	0.86	+0.5
1,690,495	+				+0.2
1,690,539	+				-0.8
1,690,539	+				-1.0
1,690,539	+				+2.7
1,690,547	-				-0.9
1,690,547	-				+0.6
1,690,654	-				-0.3
1,690,661	+				-1.1
1,690,789	-		PGA1_c16280	0.18	+0.9
1,690,789	-		PGA1_c16280	0.18	-0.7
1,690,791	+		PGA1_c16280	0.18	-0.1
1,690,791	+		PGA1_c16280	0.18	-0.3
1,690,791	+		PGA1_c16280	0.18	-0.0
1,690,794	-		PGA1_c16280	0.19	-0.3
1,690,799	-		PGA1_c16280	0.19	-0.0
1,690,799	-		PGA1_c16280	0.19	+0.7
1,690,799	-		PGA1_c16280	0.19	-0.5
1,690,799	-		PGA1_c16280	0.19	+0.5
1,690,816	+		PGA1_c16280	0.21	+0.1
1,690,817	+		PGA1_c16280	0.21	-0.1
1,690,835	-		PGA1_c16280	0.22	-0.6
1,690,943	+		PGA1_c16280	0.33	-0.2
1,690,951	-		PGA1_c16280	0.33	+0.9
1,690,951	-		PGA1_c16280	0.33	+1.5
1,690,976	+		PGA1_c16280	0.36	+0.2
1,690,976	+		PGA1_c16280	0.36	-2.1
1,690,976	+		PGA1_c16280	0.36	+1.4
1,690,984	-		PGA1_c16280	0.37	-0.5
1,691,140	+		PGA1_c16280	0.51	+1.7
1,691,169	+		PGA1_c16280	0.54	-1.8
1,691,258	-		PGA1_c16280	0.62	+1.9
1,691,286	+		PGA1_c16280	0.65	+0.9
1,691,289	-		PGA1_c16280	0.65	+1.1
1,691,293	-		PGA1_c16280	0.66	+0.9
1,691,294	-		PGA1_c16280	0.66	-2.1
1,691,345	-		PGA1_c16280	0.71	-1.3
1,691,373	+		PGA1_c16280	0.73	+0.6
1,691,381	-		PGA1_c16280	0.74	+0.2
1,691,389	+		PGA1_c16280	0.75	-0.4
1,691,430	+		PGA1_c16280	0.79	-1.6
1,691,438	-		PGA1_c16280	0.79	-0.0
1,691,446	+		PGA1_c16280	0.80	+2.1
1,691,474	+		PGA1_c16280	0.83	+0.9
1,691,474	+		PGA1_c16280	0.83	+2.3
1,691,474	+		PGA1_c16280	0.83	+0.3
1,691,474	-		PGA1_c16280	0.83	+1.2
1,691,479	+		PGA1_c16280	0.83	-1.3
1,691,482	-		PGA1_c16280	0.84	+1.3
1,691,531	-		PGA1_c16280	0.88	+1.8
1,691,531	-		PGA1_c16280	0.88	+1.2
1,691,553	-				+0.5
1,691,560	+				-0.1
1,691,568	-				-0.3
1,691,586	-				-0.0
1,691,590	+				-2.1
1,691,590	+				-0.5
1,691,590	+				-0.1
1,691,683	+				-0.5
1,691,690	-				+0.2
1,691,710	-				-1.2
1,691,710	-				+0.2
1,691,772	-		PGA1_c16290	0.13	+0.7
1,691,783	+		PGA1_c16290	0.14	-0.0
1,691,794	+		PGA1_c16290	0.15	-3.0
1,691,802	-		PGA1_c16290	0.16	-0.4
1,691,863	+		PGA1_c16290	0.23	-1.2
1,691,949	+		PGA1_c16290	0.32	+0.8
1,691,957	-		PGA1_c16290	0.33	+0.3
1,692,045	+		PGA1_c16290	0.42	-0.9
1,692,045	+		PGA1_c16290	0.42	-1.1
1,692,053	-		PGA1_c16290	0.43	+0.4
1,692,053	-		PGA1_c16290	0.43	-0.3
1,692,053	-		PGA1_c16290	0.43	-0.4
1,692,065	-		PGA1_c16290	0.44	-0.9
1,692,122	+		PGA1_c16290	0.50	+1.0
1,692,137	-		PGA1_c16290	0.52	+0.7
1,692,260	-		PGA1_c16290	0.65	-0.2
1,692,280	+		PGA1_c16290	0.67	-1.0
1,692,285	+		PGA1_c16290	0.68	-0.3
1,692,331	-		PGA1_c16290	0.73	-0.0
1,692,356	+		PGA1_c16290	0.75	-0.4
1,692,360	-		PGA1_c16290	0.76	-0.3
1,692,364	-		PGA1_c16290	0.76	+0.2
1,692,375	-		PGA1_c16290	0.77	-0.7
1,692,405	-		PGA1_c16290	0.80	-0.1
1,692,414	+		PGA1_c16290	0.81	+0.0
1,692,424	+		PGA1_c16290	0.82	+1.5
1,692,424	+		PGA1_c16290	0.82	+0.8
1,692,432	-		PGA1_c16290	0.83	-1.3
1,692,432	-		PGA1_c16290	0.83	-0.3
1,692,525	+				+1.6
1,692,536	+				-0.8
1,692,617	-				-1.6
1,692,624	+				-0.9
1,692,641	+				+0.5