Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c10960

Experiment: m.b. Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.001 mg/ml
1,132,906	+		PGA1_c10950	0.32	-0.2
1,132,972	+		PGA1_c10950	0.38	-0.8
1,132,982	+		PGA1_c10950	0.38	-0.5
1,132,990	+		PGA1_c10950	0.39	+0.8
1,132,990	-		PGA1_c10950	0.39	+1.2
1,132,998	-		PGA1_c10950	0.40	-0.2
1,133,115	-		PGA1_c10950	0.49	+0.8
1,133,139	+		PGA1_c10950	0.51	-0.8
1,133,146	+		PGA1_c10950	0.51	+0.5
1,133,176	+		PGA1_c10950	0.54	+2.1
1,133,176	+		PGA1_c10950	0.54	+1.2
1,133,176	+		PGA1_c10950	0.54	+0.8
1,133,295	+		PGA1_c10950	0.63	+1.2
1,133,295	+		PGA1_c10950	0.63	-0.8
1,133,295	+		PGA1_c10950	0.63	-0.5
1,133,304	-		PGA1_c10950	0.64	+0.8
1,133,343	-		PGA1_c10950	0.67	+1.8
1,133,507	+		PGA1_c10950	0.80	+1.4
1,133,517	+		PGA1_c10950	0.81	-1.9
1,133,554	-		PGA1_c10950	0.83	-0.7
1,133,580	-		PGA1_c10950	0.86	+1.5
1,133,605	+		PGA1_c10950	0.88	+1.8
1,133,605	+		PGA1_c10950	0.88	+1.5
1,133,648	-				+1.5
1,133,669	-				-1.5
1,133,669	-				-1.0
1,133,736	+				+0.0
1,133,768	-				+0.2
1,133,778	+				+0.8
1,133,786	-				+1.8
1,133,959	-				+0.0
1,134,032	-				+1.8
1,134,092	+		PGA1_c10960	0.11	+0.5
1,134,092	+		PGA1_c10960	0.11	-1.5
1,134,092	+		PGA1_c10960	0.11	-0.6
1,134,092	+		PGA1_c10960	0.11	+0.5
1,134,092	+		PGA1_c10960	0.11	+1.7
1,134,095	-		PGA1_c10960	0.11	+2.4
1,134,122	+		PGA1_c10960	0.13	-0.4
1,134,151	+		PGA1_c10960	0.14	-0.2
1,134,200	+		PGA1_c10960	0.17	+1.2
1,134,208	-		PGA1_c10960	0.17	+0.7
1,134,214	-		PGA1_c10960	0.17	+1.4
1,134,278	+		PGA1_c10960	0.21	+2.0
1,134,327	+		PGA1_c10960	0.24	+1.3
1,134,335	-		PGA1_c10960	0.24	+0.2
1,134,342	-		PGA1_c10960	0.24	-0.4
1,134,369	+		PGA1_c10960	0.26	-0.2
1,134,381	+		PGA1_c10960	0.26	+0.6
1,134,398	+		PGA1_c10960	0.27	+0.4
1,134,406	-		PGA1_c10960	0.28	+1.8
1,134,539	+		PGA1_c10960	0.35	-1.2
1,134,592	+		PGA1_c10960	0.38	-1.2
1,134,600	-		PGA1_c10960	0.38	+0.5
1,134,618	-		PGA1_c10960	0.39	-2.2
1,134,628	+		PGA1_c10960	0.40	-0.2
1,134,688	+		PGA1_c10960	0.43	+1.0
1,134,765	+		PGA1_c10960	0.47	+0.8
1,134,765	+		PGA1_c10960	0.47	-1.5
1,134,773	-		PGA1_c10960	0.47	-0.2
1,134,773	-		PGA1_c10960	0.47	+1.8
1,134,788	+		PGA1_c10960	0.48	+1.1
1,134,820	+		PGA1_c10960	0.50	+1.8
1,134,884	+		PGA1_c10960	0.53	+0.1
1,134,998	+		PGA1_c10960	0.59	+0.1
1,134,998	+		PGA1_c10960	0.59	-0.2
1,134,998	+		PGA1_c10960	0.59	+0.8
1,135,001	-		PGA1_c10960	0.59	+0.5
1,135,087	+		PGA1_c10960	0.64	+1.7
1,135,113	-		PGA1_c10960	0.65	-0.2
1,135,134	+		PGA1_c10960	0.67	-0.5
1,135,183	+		PGA1_c10960	0.69	-0.8
1,135,185	+		PGA1_c10960	0.69	+0.1
1,135,191	-		PGA1_c10960	0.70	+0.8
1,135,238	+		PGA1_c10960	0.72	+0.8
1,135,246	-		PGA1_c10960	0.73	+0.4
1,135,342	+		PGA1_c10960	0.78	+1.2
1,135,434	+		PGA1_c10960	0.83	+0.2
1,135,434	+		PGA1_c10960	0.83	+0.6
1,135,434	+		PGA1_c10960	0.83	-0.2
1,135,434	+		PGA1_c10960	0.83	+1.9
1,135,434	+		PGA1_c10960	0.83	+0.8
1,135,434	+				-0.8
1,135,442	-		PGA1_c10960	0.83	+0.8
1,135,442	-		PGA1_c10960	0.83	+0.8
1,135,442	-		PGA1_c10960	0.83	+1.8
1,135,442	-		PGA1_c10960	0.83	+0.4
1,135,560	+		PGA1_c10960	0.89	-0.8
1,135,560	+		PGA1_c10960	0.89	-2.0
1,135,603	+				+1.1
1,135,603	+				-0.4
1,135,603	+				-0.8
1,135,611	-				+0.8
1,135,611	-				+0.4
1,135,650	+				-0.0
1,135,657	+				-1.4
1,135,658	-				-0.0
1,135,663	-				-1.5
1,135,663	-				-1.2
1,135,663	-				+0.2
1,135,663	-				+1.8
1,135,693	-				-0.0
1,135,776	+				-0.2
1,135,784	-				+1.4
1,135,784	-				-0.8
1,135,828	-				+0.8
1,136,219	+		PGA1_c10970	0.34	+2.1
1,136,246	+		PGA1_c10970	0.36	+0.2
1,136,267	-		PGA1_c10970	0.38	-1.8
1,136,288	-		PGA1_c10970	0.40	+0.4
1,136,288	-		PGA1_c10970	0.40	+0.8
1,136,288	-		PGA1_c10970	0.40	+2.0
1,136,305	+		PGA1_c10970	0.41	+0.4
1,136,313	-		PGA1_c10970	0.42	-1.2
1,136,348	-		PGA1_c10970	0.45	-0.6
1,136,348	-		PGA1_c10970	0.45	-1.7
1,136,408	-		PGA1_c10970	0.51	+0.8
1,136,421	+		PGA1_c10970	0.52	+1.8
1,136,421	+		PGA1_c10970	0.52	+1.6
1,136,451	-		PGA1_c10970	0.55	+1.1
1,136,546	-		PGA1_c10970	0.63	+0.5
1,136,636	+				-1.2