Strain Fitness in Dechlorosoma suillum PS around Dsui_2733

Experiment: Anaero. lactate (C), nitrate electron acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2732 and Dsui_2733 are separated by 56 nucleotidesDsui_2733 and Dsui_2734 are separated by 137 nucleotidesDsui_2734 and Dsui_2735 are separated by 576 nucleotides Dsui_2732: Dsui_2732 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 2,887,207 to 2,888,073 _2732 Dsui_2733: Dsui_2733 - bacterioferritin, at 2,888,130 to 2,888,603 _2733 Dsui_2734: Dsui_2734 - bacterioferritin-associated ferredoxin, at 2,888,741 to 2,888,947 _2734 Dsui_2735: Dsui_2735 - glycine cleavage system T protein, at 2,889,524 to 2,890,615 _2735 Position (kb) 2888 2889Strain fitness (log2 ratio) -2 -1 0 1 2at 2887.131 kb on - strandat 2887.149 kb on + strandat 2887.149 kb on + strandat 2887.501 kb on - strand, within Dsui_2732at 2887.516 kb on - strand, within Dsui_2732at 2887.555 kb on - strand, within Dsui_2732at 2887.572 kb on - strandat 2887.614 kb on - strand, within Dsui_2732at 2887.677 kb on - strand, within Dsui_2732at 2887.706 kb on - strand, within Dsui_2732at 2887.926 kb on - strand, within Dsui_2732at 2888.030 kb on - strandat 2888.101 kb on + strandat 2888.314 kb on - strand, within Dsui_2733at 2888.405 kb on - strand, within Dsui_2733at 2888.444 kb on + strand, within Dsui_2733at 2888.698 kb on - strandat 2888.815 kb on + strand, within Dsui_2734at 2888.856 kb on - strand, within Dsui_2734at 2888.856 kb on - strand, within Dsui_2734at 2888.947 kb on - strandat 2888.964 kb on - strandat 2888.964 kb on - strandat 2889.161 kb on + strandat 2889.228 kb on + strandat 2889.310 kb on + strandat 2889.312 kb on + strandat 2889.377 kb on + strandat 2889.377 kb on + strandat 2889.408 kb on + strandat 2889.421 kb on + strandat 2889.422 kb on - strandat 2889.563 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaero. lactate (C), nitrate electron acceptor
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2,887,131 - -0.1
2,887,149 + -0.5
2,887,149 + +0.2
2,887,501 - Dsui_2732 0.34 -0.1
2,887,516 - Dsui_2732 0.36 -0.3
2,887,555 - Dsui_2732 0.40 +0.9
2,887,572 - +0.0
2,887,614 - Dsui_2732 0.47 -1.0
2,887,677 - Dsui_2732 0.54 +1.6
2,887,706 - Dsui_2732 0.58 -0.4
2,887,926 - Dsui_2732 0.83 -0.3
2,888,030 - -2.2
2,888,101 + +2.0
2,888,314 - Dsui_2733 0.39 -0.3
2,888,405 - Dsui_2733 0.58 -1.3
2,888,444 + Dsui_2733 0.66 -1.0
2,888,698 - +0.1
2,888,815 + Dsui_2734 0.36 -1.3
2,888,856 - Dsui_2734 0.56 -0.3
2,888,856 - Dsui_2734 0.56 -0.2
2,888,947 - -1.4
2,888,964 - -0.1
2,888,964 - +0.1
2,889,161 + -1.0
2,889,228 + +0.3
2,889,310 + +0.5
2,889,312 + -0.1
2,889,377 + -0.1
2,889,377 + +0.5
2,889,408 + -0.5
2,889,421 + +0.2
2,889,422 - +0.4
2,889,563 + +0.1

Or see this region's nucleotide sequence