Strain Fitness in Shewanella amazonensis SB2B around Sama_1181

Experiment: L-Glutamine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine
1,442,797	+		Sama_1180	0.74	+0.1
1,442,797	+		Sama_1180	0.74	+0.6
1,442,797	+		Sama_1180	0.74	-1.5
1,442,798	-		Sama_1180	0.74	-0.1
1,442,798	-		Sama_1180	0.74	-1.0
1,442,821	+		Sama_1180	0.75	+0.6
1,442,823	+		Sama_1180	0.75	-1.3
1,442,823	+		Sama_1180	0.75	-0.6
1,442,823	+		Sama_1180	0.75	-0.8
1,442,823	+		Sama_1180	0.75	-0.9
1,442,823	+		Sama_1180	0.75	-0.4
1,442,823	+		Sama_1180	0.75	+0.2
1,442,823	+		Sama_1180	0.75	+1.9
1,442,824	-		Sama_1180	0.75	+1.5
1,442,824	-		Sama_1180	0.75	-1.1
1,442,824	-		Sama_1180	0.75	+0.5
1,442,824	-		Sama_1180	0.75	-0.9
1,442,824	-		Sama_1180	0.75	-0.5
1,442,843	+		Sama_1180	0.76	-1.1
1,442,843	+		Sama_1180	0.76	+0.9
1,442,843	+		Sama_1180	0.76	-1.1
1,442,844	-		Sama_1180	0.76	-0.6
1,442,882	+		Sama_1180	0.77	+1.9
1,442,925	+		Sama_1180	0.79	+0.6
1,442,925	+		Sama_1180	0.79	-1.6
1,442,945	+		Sama_1180	0.79	+0.8
1,442,953	+		Sama_1180	0.80	+1.6
1,442,962	+		Sama_1180	0.80	+0.9
1,442,975	-		Sama_1180	0.80	+0.5
1,443,059	+		Sama_1180	0.83	-0.8
1,443,105	+		Sama_1180	0.85	+0.5
1,443,110	-		Sama_1180	0.85	+0.5
1,443,110	-		Sama_1180	0.85	+2.5
1,443,110	-		Sama_1180	0.85	-0.0
1,443,224	+		Sama_1180	0.90	+0.0
1,443,224	+		Sama_1180	0.90	-1.5
1,443,224	+		Sama_1180	0.90	+0.3
1,443,225	-		Sama_1180	0.90	-0.2
1,443,225	-		Sama_1180	0.90	+1.4
1,443,232	+		Sama_1180	0.90	+0.2
1,443,232	+		Sama_1180	0.90	+0.8
1,443,232	+		Sama_1180	0.90	+0.2
1,443,232	+		Sama_1180	0.90	-0.6
1,443,232	+		Sama_1180	0.90	-0.8
1,443,233	-		Sama_1180	0.90	+1.8
1,443,265	+				-1.4
1,443,265	+				+0.8
1,443,265	+				+0.7
1,443,265	+				-0.4
1,443,265	+				+2.2
1,443,266	-				-1.5
1,443,266	-				+1.2
1,443,266	-				+0.5
1,443,266	-				-1.2
1,443,266	-				-0.8
1,443,269	+				+1.2
1,443,269	+				+1.0
1,443,269	+				+0.5
1,443,269	+				+1.2
1,443,270	-				-0.0
1,443,270	-				+0.2
1,443,270	-				-0.1
1,443,270	-				-1.6
1,443,273	+				+0.4
1,443,273	+				+0.3
1,443,274	-				-0.1
1,443,317	+				-1.1
1,443,317	+				-0.5
1,443,317	+				-0.5
1,443,318	-				+0.2
1,443,349	+				+0.0
1,443,349	+				-0.4
1,443,349	+				-0.1
1,443,353	+				+0.2
1,443,354	-				+1.8
1,443,354	-				-0.6
1,443,363	+				-0.2
1,443,364	-				+0.2
1,443,393	+				+1.8
1,443,415	+				-0.4
1,443,415	+				+0.1
1,443,415	+				+0.1
1,443,416	-				+0.5
1,443,434	+				-0.6
1,443,435	-				+0.8
1,443,503	+				-0.8
1,443,503	+				-0.4
1,443,529	+				-0.1
1,443,529	+				-1.2
1,443,529	+				+0.5
1,443,530	-				-0.1
1,443,531	+				-0.8
1,443,531	+				+0.5
1,443,532	-				-1.0
1,443,532	-				+0.2
1,443,532	-				-0.1
1,443,532	-				+2.1
1,443,532	-				+0.5
1,443,544	+				+0.4
1,443,544	+				-0.1
1,443,544	+				+0.4
1,443,544	+				-0.2
1,443,544	+				+0.4
1,443,544	+				-0.6
1,443,544	+				-0.0
1,443,544	+				+1.2
1,443,544	+				+0.6
1,443,544	+				+0.6
1,443,544	+				-0.8
1,443,544	+				+0.9
1,443,544	+				+0.2
1,443,544	+				+2.2
1,443,545	-				+0.1
1,443,545	-				-0.5
1,443,545	-				+0.7
1,443,545	-				-1.5
1,443,545	-				+0.3
1,443,545	-				-1.1
1,443,545	-				-0.0
1,443,548	+				-1.2
1,443,548	+				+0.7
1,443,548	+				+1.8
1,443,549	-				-0.7
1,443,549	-				-0.2
1,443,549	-				-1.8
1,443,596	+				-0.0
1,443,596	+				-1.5
1,443,597	-				-0.4
1,443,597	-				+0.2
1,443,597	-				-1.0
1,443,668	+				+0.3
1,443,669	-				-0.3
1,443,671	+				-0.7
1,443,671	+				-0.2
1,443,672	-				-0.2
1,443,741	+				-0.2
1,443,741	+				-1.0
1,443,741	+				+0.6
1,443,741	+				-0.0
1,443,742	-				+1.2
1,443,742	-				+0.2
1,443,742	-				+1.3
1,443,742	-				-0.4
1,443,742	-				+1.4
1,443,742	-				+0.9
1,443,759	+				-1.5
1,443,759	+				-0.1
1,443,759	+				+0.7
1,443,759	+				+0.2
1,443,759	+				-0.7
1,443,759	+				-1.1
1,443,759	+				-2.5
1,443,759	+				-0.0
1,443,759	+				-1.4
1,443,760	-				+0.4
1,443,760	-				+1.2
1,443,760	-				-1.0
1,443,760	-				-0.9
1,443,760	-				+0.1
1,443,760	-				-0.7
1,443,760	-				-2.1
1,443,760	-				-0.2
1,443,760	-				-0.2
1,443,760	-				+0.8
1,443,761	+				-2.5
1,443,761	+				+0.9
1,443,761	+				+0.8
1,443,761	+				-0.4
1,443,761	+				+1.3
1,443,761	+				+1.2
1,443,761	+				+0.2
1,443,762	-				+0.5
1,443,762	-				+0.1
1,443,762	-				-1.3
1,443,762	-				+0.2
1,443,762	-				+0.7
1,443,762	-				-1.6
1,443,762	-				+0.4
1,443,762	-				+1.2
1,443,765	-				-0.4
1,443,765	-				-0.7
1,443,978	+		Sama_1181	0.14	-0.7
1,444,016	-		Sama_1181	0.17	-0.4
1,444,067	-		Sama_1181	0.21	+0.4
1,444,095	+		Sama_1181	0.23	+2.5
1,444,101	+		Sama_1181	0.23	+1.4
1,444,101	+		Sama_1181	0.23	+0.6
1,444,102	-		Sama_1181	0.23	-1.4
1,444,102	-		Sama_1181	0.23	+1.5
1,444,146	+		Sama_1181	0.26	+1.8
1,444,147	-		Sama_1181	0.27	-0.2
1,444,245	+		Sama_1181	0.34	-0.2
1,444,245	+		Sama_1181	0.34	+0.5
1,444,245	+		Sama_1181	0.34	-0.6
1,444,245	+		Sama_1181	0.34	-1.0
1,444,246	-		Sama_1181	0.34	-1.6
1,444,286	+		Sama_1181	0.37	+1.4
1,444,292	+		Sama_1181	0.38	-3.0
1,444,292	+		Sama_1181	0.38	+0.2
1,444,292	+		Sama_1181	0.38	+1.0
1,444,293	-		Sama_1181	0.38	-1.1
1,444,473	+		Sama_1181	0.51	-0.4
1,444,473	+		Sama_1181	0.51	+1.0
1,444,537	-		Sama_1181	0.56	-0.7
1,444,589	+		Sama_1181	0.60	+0.2
1,444,590	-		Sama_1181	0.60	+0.2
1,444,598	-		Sama_1181	0.61	-0.6
1,444,598	-		Sama_1181	0.61	+1.8
1,444,613	+		Sama_1181	0.62	-1.3
1,444,613	+		Sama_1181	0.62	-0.3
1,444,613	+		Sama_1181	0.62	+0.2
1,444,613	+		Sama_1181	0.62	+1.2
1,444,614	-		Sama_1181	0.62	-1.3
1,444,614	-		Sama_1181	0.62	-0.1
1,444,614	-		Sama_1181	0.62	-0.8
1,444,660	+		Sama_1181	0.66	-0.5
1,444,661	-		Sama_1181	0.66	-0.4
1,444,793	+		Sama_1181	0.76	-0.1
1,444,793	+		Sama_1181	0.76	-0.3
1,444,793	+		Sama_1181	0.76	-2.7
1,444,793	+		Sama_1181	0.76	-0.9
1,444,793	+		Sama_1181	0.76	-1.3
1,444,793	+		Sama_1181	0.76	-0.7
1,444,793	+		Sama_1181	0.76	-0.1
1,444,794	-		Sama_1181	0.76	-0.8
1,444,794	-		Sama_1181	0.76	+0.3
1,444,794	-		Sama_1181	0.76	-1.3
1,444,794	-		Sama_1181	0.76	+0.6
1,444,794	-		Sama_1181	0.76	-0.2
1,444,794	-		Sama_1181	0.76	-0.4
1,444,794	-		Sama_1181	0.76	+0.0
1,444,797	+		Sama_1181	0.76	-0.8
1,444,797	+		Sama_1181	0.76	+0.4
1,444,797	+		Sama_1181	0.76	-0.6
1,444,798	-		Sama_1181	0.76	+0.1
1,444,798	-		Sama_1181	0.76	-0.7
1,444,798	-		Sama_1181	0.76	+0.8
1,444,870	+		Sama_1181	0.81	+2.4
1,444,871	-		Sama_1181	0.82	-1.4
1,444,871	-		Sama_1181	0.82	-0.9
1,444,994	+				-0.6
1,444,994	+				+0.2
1,444,995	-				+0.2
1,444,995	-				+0.6
1,445,001	+				-0.8
1,445,117	-				-0.0
1,445,117	-				-0.1
1,445,137	-				+0.9
1,445,137	-				+0.5
1,445,171	+				-0.4
1,445,240	-				+1.6
1,445,248	+				-1.1
1,445,248	+				-0.8
1,445,248	+				-0.6
1,445,249	-				-0.4
1,445,249	-				-0.5
1,445,252	-				-1.9
1,445,312	-				-0.5
1,445,312	-				+2.8
1,445,355	+				+1.9
1,445,355	+				+0.2
1,445,356	-				+0.6
1,445,356	-				-1.1
1,445,358	+				+0.2
1,445,400	+				-0.5
1,445,400	+				+1.2
1,445,400	+				-1.1
1,445,401	-				-0.1
1,445,401	-				+3.5
1,445,405	-				-0.6
1,445,423	+				-1.8
1,445,437	+				+0.8
1,445,453	+				+0.8
1,445,453	+				+2.0
1,445,476	-				+0.1
1,445,514	-				+0.8
1,445,514	-				+1.0
1,445,527	+		Sama_1182	0.10	+0.7
1,445,527	+		Sama_1182	0.10	+1.2
1,445,555	-		Sama_1182	0.13	+1.3
1,445,678	+		Sama_1182	0.25	+0.2
1,445,679	-		Sama_1182	0.25	-0.4
1,445,761	+		Sama_1182	0.33	-0.8
1,445,761	+		Sama_1182	0.33	+0.1
1,445,762	-		Sama_1182	0.33	+1.9
1,445,762	-		Sama_1182	0.33	+0.3
1,445,762	-		Sama_1182	0.33	+0.2
1,445,762	-		Sama_1182	0.33	+1.8
1,445,765	+		Sama_1182	0.33	+1.3
1,445,765	+		Sama_1182	0.33	+0.2
1,445,765	+		Sama_1182	0.33	+1.0
1,445,766	-		Sama_1182	0.33	+0.7
1,445,793	+		Sama_1182	0.36	-0.1
1,445,794	-		Sama_1182	0.36	+0.2
1,445,794	-		Sama_1182	0.36	+2.8
1,445,814	+		Sama_1182	0.38	+1.4
1,445,815	-		Sama_1182	0.38	+1.0
1,445,815	-		Sama_1182	0.38	-0.4
1,445,924	-		Sama_1182	0.48	+0.9
1,446,068	+		Sama_1182	0.62	+1.8