Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_786 and HP15_787 overlap by 11 nucleotides HP15_787 and HP15_788 are separated by 12 nucleotides HP15_788 and HP15_789 are separated by 225 nucleotides
HP15_786: HP15_786 - DNA repair protein RecO, at 797,523 to 798,251
_786
HP15_787: HP15_787 - pyridoxal phosphate biosynthetic protein PdxJ, at 798,241 to 798,981
_787
HP15_788: HP15_788 - multi-sensor hybrid histidine kinase, at 798,994 to 801,867
_788
HP15_789: HP15_789 - cysteine synthase B, at 802,093 to 802,986
_789
Position (kb) 798
799
800
801
802 Strain fitness (log2 ratio) -1
0
1
2
3 at 798.203 kb on - strand at 798.994 kb on - strand at 798.999 kb on - strand at 798.999 kb on - strand at 798.999 kb on - strand at 799.063 kb on - strand at 799.063 kb on - strand at 799.079 kb on + strand at 799.079 kb on + strand at 799.087 kb on - strand at 799.092 kb on + strand at 799.134 kb on - strand at 799.167 kb on - strand at 799.219 kb on - strand at 799.395 kb on + strand, within HP15_788 at 799.459 kb on + strand, within HP15_788 at 799.510 kb on - strand, within HP15_788 at 799.591 kb on + strand, within HP15_788 at 799.629 kb on + strand, within HP15_788 at 799.637 kb on - strand, within HP15_788 at 799.639 kb on + strand, within HP15_788 at 799.714 kb on - strand, within HP15_788 at 799.719 kb on - strand, within HP15_788 at 799.997 kb on - strand, within HP15_788 at 800.054 kb on + strand, within HP15_788 at 800.062 kb on - strand, within HP15_788 at 800.064 kb on + strand, within HP15_788 at 800.220 kb on + strand, within HP15_788 at 800.307 kb on + strand, within HP15_788 at 800.319 kb on + strand, within HP15_788 at 800.327 kb on - strand, within HP15_788 at 800.339 kb on + strand, within HP15_788 at 800.404 kb on + strand, within HP15_788 at 800.417 kb on - strand, within HP15_788 at 800.633 kb on - strand, within HP15_788 at 800.684 kb on + strand, within HP15_788 at 800.692 kb on - strand, within HP15_788 at 800.786 kb on - strand, within HP15_788 at 800.812 kb on - strand, within HP15_788 at 800.819 kb on + strand, within HP15_788 at 800.919 kb on - strand, within HP15_788 at 800.952 kb on - strand, within HP15_788 at 800.998 kb on - strand, within HP15_788 at 801.122 kb on + strand, within HP15_788 at 801.127 kb on + strand, within HP15_788 at 801.190 kb on + strand, within HP15_788 at 801.218 kb on + strand, within HP15_788 at 801.298 kb on + strand, within HP15_788 at 801.397 kb on + strand, within HP15_788 at 801.397 kb on + strand, within HP15_788 at 801.460 kb on + strand, within HP15_788 at 801.460 kb on - strand, within HP15_788 at 801.540 kb on + strand, within HP15_788 at 801.548 kb on - strand, within HP15_788 at 801.563 kb on + strand, within HP15_788 at 801.565 kb on - strand, within HP15_788 at 801.568 kb on + strand, within HP15_788 at 801.576 kb on - strand, within HP15_788 at 801.645 kb on + strand at 801.667 kb on - strand at 801.736 kb on - strand at 801.795 kb on + strand at 801.805 kb on + strand at 801.819 kb on + strand at 802.033 kb on - strand at 802.050 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 798,203 - +0.4 798,994 - +0.3 798,999 - -0.7 798,999 - -1.4 798,999 - -0.3 799,063 - +0.1 799,063 - +0.8 799,079 + +1.5 799,079 + +2.1 799,087 - +1.9 799,092 + +3.2 799,134 - +2.3 799,167 - +2.6 799,219 - +2.5 799,395 + HP15_788 0.14 +1.8 799,459 + HP15_788 0.16 +1.5 799,510 - HP15_788 0.18 +1.5 799,591 + HP15_788 0.21 +1.6 799,629 + HP15_788 0.22 +2.2 799,637 - HP15_788 0.22 +1.7 799,639 + HP15_788 0.22 +1.8 799,714 - HP15_788 0.25 +0.4 799,719 - HP15_788 0.25 +1.3 799,997 - HP15_788 0.35 +2.3 800,054 + HP15_788 0.37 +2.0 800,062 - HP15_788 0.37 +2.1 800,064 + HP15_788 0.37 +1.9 800,220 + HP15_788 0.43 +2.4 800,307 + HP15_788 0.46 +1.6 800,319 + HP15_788 0.46 +2.4 800,327 - HP15_788 0.46 +2.2 800,339 + HP15_788 0.47 +2.0 800,404 + HP15_788 0.49 +1.1 800,417 - HP15_788 0.50 +2.1 800,633 - HP15_788 0.57 +2.3 800,684 + HP15_788 0.59 +2.6 800,692 - HP15_788 0.59 +1.5 800,786 - HP15_788 0.62 +2.1 800,812 - HP15_788 0.63 +2.5 800,819 + HP15_788 0.64 +1.6 800,919 - HP15_788 0.67 +1.4 800,952 - HP15_788 0.68 +1.7 800,998 - HP15_788 0.70 +2.0 801,122 + HP15_788 0.74 +3.6 801,127 + HP15_788 0.74 +2.8 801,190 + HP15_788 0.76 +1.8 801,218 + HP15_788 0.77 +2.0 801,298 + HP15_788 0.80 +2.6 801,397 + HP15_788 0.84 +2.6 801,397 + HP15_788 0.84 +3.0 801,460 + HP15_788 0.86 +3.3 801,460 - HP15_788 0.86 +1.3 801,540 + HP15_788 0.89 +3.2 801,548 - HP15_788 0.89 +1.1 801,563 + HP15_788 0.89 +3.3 801,565 - HP15_788 0.89 +2.2 801,568 + HP15_788 0.90 +3.2 801,576 - HP15_788 0.90 +1.5 801,645 + +3.5 801,667 - +1.9 801,736 - +2.3 801,795 + +2.3 801,805 + +3.3 801,819 + +3.0 802,033 - -1.5 802,050 - -1.3
Or see this region's nucleotide sequence