Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c34380

Experiment: m.b. D-Cycloserine 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.0625 mg/ml
3,603,470	+		PGA1_c34370	0.29	+0.5
3,603,477	-		PGA1_c34370	0.30	+1.6
3,603,484	-		PGA1_c34370	0.30	+0.6
3,603,541	+		PGA1_c34370	0.35	+1.8
3,603,541	+		PGA1_c34370	0.35	+1.6
3,603,592	-		PGA1_c34370	0.39	+1.0
3,603,605	+		PGA1_c34370	0.40	-0.2
3,603,632	-		PGA1_c34370	0.42	+2.5
3,603,640	+		PGA1_c34370	0.43	+1.6
3,603,658	+		PGA1_c34370	0.44	-1.5
3,603,707	+		PGA1_c34370	0.48	-2.3
3,603,707	+		PGA1_c34370	0.48	-0.4
3,603,707	+		PGA1_c34370	0.48	-0.3
3,603,707	+		PGA1_c34370	0.48	-0.2
3,603,707	+		PGA1_c34370	0.48	+0.8
3,603,710	-		PGA1_c34370	0.48	+0.6
3,603,712	+		PGA1_c34370	0.48	-0.9
3,603,712	+		PGA1_c34370	0.48	-1.3
3,603,712	+		PGA1_c34370	0.48	+0.3
3,603,715	-		PGA1_c34370	0.49	-0.2
3,603,720	-		PGA1_c34370	0.49	+0.6
3,603,771	+		PGA1_c34370	0.53	-2.3
3,603,771	+		PGA1_c34370	0.53	-0.6
3,603,771	+		PGA1_c34370	0.53	+0.8
3,603,779	-		PGA1_c34370	0.54	+0.0
3,603,799	+		PGA1_c34370	0.55	-0.4
3,603,799	+		PGA1_c34370	0.55	+0.5
3,603,808	+		PGA1_c34370	0.56	+0.9
3,603,849	+		PGA1_c34370	0.59	+0.5
3,603,862	-		PGA1_c34370	0.60	+1.0
3,603,862	-		PGA1_c34370	0.60	-0.7
3,603,872	+		PGA1_c34370	0.61	+0.9
3,603,872	+		PGA1_c34370	0.61	+1.2
3,603,880	-		PGA1_c34370	0.61	+0.0
3,603,911	-		PGA1_c34370	0.64	-0.4
3,603,948	+		PGA1_c34370	0.67	+0.5
3,603,965	+		PGA1_c34370	0.68	-2.1
3,603,966	+		PGA1_c34370	0.68	+0.7
3,603,987	-		PGA1_c34370	0.70	+0.0
3,604,022	+		PGA1_c34370	0.73	+0.2
3,604,022	+		PGA1_c34370	0.73	+1.9
3,604,022	+		PGA1_c34370	0.73	-1.5
3,604,030	-		PGA1_c34370	0.73	-0.3
3,604,030	-		PGA1_c34370	0.73	+1.6
3,604,076	-		PGA1_c34370	0.77	+0.2
3,604,155	+		PGA1_c34370	0.83	-1.4
3,604,155	+		PGA1_c34370	0.83	-0.8
3,604,155	+		PGA1_c34370	0.83	-0.0
3,604,155	+		PGA1_c34370	0.83	+1.0
3,604,155	+		PGA1_c34370	0.83	+0.5
3,604,163	-		PGA1_c34370	0.84	+1.3
3,604,163	-		PGA1_c34370	0.84	+1.2
3,604,163	-		PGA1_c34370	0.84	+0.0
3,604,165	+		PGA1_c34370	0.84	+0.2
3,604,165	+		PGA1_c34370	0.84	+1.4
3,604,165	+		PGA1_c34370	0.84	-2.7
3,604,173	-		PGA1_c34370	0.85	+0.8
3,604,173	-		PGA1_c34370	0.85	-1.2
3,604,181	-		PGA1_c34370	0.85	+0.4
3,604,207	-		PGA1_c34370	0.87	-0.3
3,604,260	+				-2.4
3,604,268	-				+1.5
3,604,304	-				-0.0
3,604,304	-				+1.8
3,604,304	-				+0.9
3,604,344	+				-0.4
3,604,400	+				+0.0
3,604,439	-				+1.9
3,604,552	-				+1.0
3,604,649	+		PGA1_c34380	0.16	-0.2
3,604,649	+		PGA1_c34380	0.16	-3.5
3,604,713	+		PGA1_c34380	0.22	+2.0
3,604,721	+		PGA1_c34380	0.23	+0.2
3,604,772	+		PGA1_c34380	0.27	+1.0
3,604,772	+		PGA1_c34380	0.27	-1.5
3,604,780	-		PGA1_c34380	0.28	+1.6
3,604,780	-		PGA1_c34380	0.28	+0.3
3,604,780	-		PGA1_c34380	0.28	+0.9
3,604,817	+		PGA1_c34380	0.31	+0.3
3,604,959	+		PGA1_c34380	0.44	-0.1
3,604,970	+		PGA1_c34380	0.45	+1.3
3,604,973	-		PGA1_c34380	0.45	+0.8
3,604,992	+		PGA1_c34380	0.47	+1.1
3,604,992	+		PGA1_c34380	0.47	-1.3
3,605,016	+		PGA1_c34380	0.49	+0.8
3,605,019	+		PGA1_c34380	0.50	-1.3
3,605,050	+		PGA1_c34380	0.52	+0.7
3,605,052	+		PGA1_c34380	0.53	+2.1
3,605,078	+		PGA1_c34380	0.55	+1.4
3,605,088	+		PGA1_c34380	0.56	+2.4
3,605,088	+		PGA1_c34380	0.56	-0.1
3,605,096	-		PGA1_c34380	0.57	-1.0
3,605,119	+		PGA1_c34380	0.59	-1.3
3,605,127	-		PGA1_c34380	0.59	-0.1
3,605,182	-		PGA1_c34380	0.64	-2.3
3,605,182	-		PGA1_c34380	0.64	+0.5
3,605,271	+		PGA1_c34380	0.72	+1.6
3,605,282	+		PGA1_c34380	0.73	-0.0
3,605,324	+		PGA1_c34380	0.77	+0.6
3,605,332	-		PGA1_c34380	0.78	-0.3
3,605,445	-		PGA1_c34380	0.88	-2.7
3,605,534	+				-0.0
3,605,542	-				+2.1
3,605,547	+				-0.1
3,605,570	+				+0.6
3,605,579	+				-0.1
3,605,581	+				+0.3
3,605,582	+				+0.6
3,605,582	+				+0.3
3,605,590	-				+0.3
3,605,590	-				-1.3
3,605,590	-				+1.0
3,605,624	+				+0.7
3,605,637	+				+0.8
3,605,657	+				-1.9
3,605,665	-				+1.4
3,605,732	-				-1.1
3,605,740	+				-2.5
3,605,749	+				+1.6
3,605,789	+		PGA1_c34390	0.11	+0.4
3,605,797	-		PGA1_c34390	0.12	-0.2
3,605,825	-		PGA1_c34390	0.14	+1.3
3,605,901	-		PGA1_c34390	0.21	+0.2
3,605,923	-		PGA1_c34390	0.23	+0.6
3,605,997	+		PGA1_c34390	0.30	+0.2
3,606,027	+		PGA1_c34390	0.33	-1.0
3,606,039	+		PGA1_c34390	0.34	+0.8
3,606,047	-		PGA1_c34390	0.35	+0.3
3,606,047	-		PGA1_c34390	0.35	+0.1
3,606,075	+		PGA1_c34390	0.37	+2.2
3,606,119	+		PGA1_c34390	0.41	+1.2
3,606,149	-		PGA1_c34390	0.44	+0.2
3,606,159	+		PGA1_c34390	0.45	+0.6
3,606,202	-		PGA1_c34390	0.49	+0.1
3,606,351	+		PGA1_c34390	0.62	+1.5
3,606,352	+		PGA1_c34390	0.62	+1.9
3,606,404	-		PGA1_c34390	0.67	-2.3
3,606,420	+		PGA1_c34390	0.68	+0.0
3,606,428	-		PGA1_c34390	0.69	-1.9
3,606,450	+		PGA1_c34390	0.71	+0.9
3,606,460	-		PGA1_c34390	0.72	-0.1
3,606,485	-		PGA1_c34390	0.74	+0.6
3,606,516	-		PGA1_c34390	0.77	-0.4
3,606,532	+		PGA1_c34390	0.79	-0.2
3,606,570	-		PGA1_c34390	0.82	+0.1