Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c30120

Experiment: m.b. D-Cycloserine 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.0625 mg/ml
3,147,025	-				-0.2
3,147,161	-		PGA1_c30100	0.47	-2.5
3,147,161	-		PGA1_c30100	0.47	+0.2
3,147,161	-		PGA1_c30100	0.47	-1.5
3,147,161	-		PGA1_c30100	0.47	-2.0
3,147,227	-		PGA1_c30100	0.81	-2.9
3,147,257	-				-0.6
3,147,278	-				-1.0
3,147,303	-				-0.8
3,147,562	+		PGA1_c30110	0.39	+0.1
3,147,572	+		PGA1_c30110	0.40	-1.6
3,147,667	+		PGA1_c30110	0.53	-3.2
3,147,675	-		PGA1_c30110	0.55	-0.2
3,147,695	-		PGA1_c30110	0.57	+0.6
3,147,786	-		PGA1_c30110	0.70	+1.4
3,147,865	-		PGA1_c30110	0.81	-3.0
3,147,871	-		PGA1_c30110	0.81	+0.4
3,147,954	+				+1.6
3,147,959	-				-0.4
3,147,959	-				-0.0
3,147,960	+				-2.7
3,148,015	-				-0.7
3,148,025	-				-0.2
3,148,086	-				+0.8
3,148,088	+				-0.4
3,148,109	-				+0.2
3,148,134	-				-0.5
3,148,178	+				-1.5
3,148,231	-		PGA1_c30120	0.13	+1.5
3,148,254	+		PGA1_c30120	0.15	+0.5
3,148,321	-		PGA1_c30120	0.19	+0.4
3,148,323	+		PGA1_c30120	0.19	-0.1
3,148,331	-		PGA1_c30120	0.19	+1.0
3,148,352	+		PGA1_c30120	0.21	+1.8
3,148,357	+		PGA1_c30120	0.21	+1.5
3,148,365	-		PGA1_c30120	0.21	+2.0
3,148,370	+		PGA1_c30120	0.22	-2.4
3,148,378	-		PGA1_c30120	0.22	-1.7
3,148,378	-		PGA1_c30120	0.22	-0.1
3,148,381	+		PGA1_c30120	0.22	+1.2
3,148,430	+		PGA1_c30120	0.25	-0.4
3,148,481	-		PGA1_c30120	0.29	-1.2
3,148,572	+		PGA1_c30120	0.34	+0.6
3,148,666	+		PGA1_c30120	0.40	-0.5
3,148,666	+		PGA1_c30120	0.40	-0.7
3,148,674	-		PGA1_c30120	0.41	+0.2
3,148,674	-		PGA1_c30120	0.41	+0.8
3,148,674	-		PGA1_c30120	0.41	-1.6
3,148,690	+		PGA1_c30120	0.42	-1.2
3,148,690	+		PGA1_c30120	0.42	+0.1
3,148,690	+		PGA1_c30120	0.42	-0.2
3,148,690	+		PGA1_c30120	0.42	-2.9
3,148,690	+		PGA1_c30120	0.42	-0.4
3,148,698	-		PGA1_c30120	0.42	-0.6
3,148,720	-		PGA1_c30120	0.43	+1.1
3,148,827	+		PGA1_c30120	0.50	+0.9
3,148,845	-		PGA1_c30120	0.51	+0.5
3,148,850	-		PGA1_c30120	0.52	-0.6
3,148,860	-		PGA1_c30120	0.52	+0.8
3,148,929	-		PGA1_c30120	0.56	+3.1
3,148,964	+		PGA1_c30120	0.59	-0.9
3,149,016	+		PGA1_c30120	0.62	-4.3
3,149,053	+		PGA1_c30120	0.64	-1.4
3,149,066	-		PGA1_c30120	0.65	+0.8
3,149,100	-		PGA1_c30120	0.67	+0.2
3,149,105	-		PGA1_c30120	0.67	+0.6
3,149,110	-		PGA1_c30120	0.68	+1.2
3,149,142	+		PGA1_c30120	0.70	+0.5
3,149,163	-		PGA1_c30120	0.71	-1.5
3,149,317	-		PGA1_c30120	0.81	-0.3
3,149,328	+		PGA1_c30120	0.81	+0.8
3,149,372	+		PGA1_c30120	0.84	+1.7
3,149,397	-		PGA1_c30120	0.85	-0.9
3,149,455	-		PGA1_c30120	0.89	-1.1
3,149,483	+				+0.5
3,149,483	+				-0.8
3,149,483	+				-1.3
3,149,489	-				-0.7
3,149,491	-				+1.0
3,149,491	-				-3.0
3,149,491	-				+1.1
3,149,491	-				+2.3
3,149,548	+				-1.2
3,149,577	-				+0.9
3,149,606	+				-0.9
3,149,614	-				+0.2
3,149,645	-				-0.2
3,149,647	-				+0.6
3,149,714	+				-1.4
3,149,714	+				-2.6
3,149,714	+				-0.1
3,149,714	+				-1.6
3,149,714	+				-1.9
3,149,714	+				+0.5
3,149,717	-				+0.4
3,149,722	-				-1.7
3,149,722	-				+1.0
3,149,722	-				+1.2
3,149,722	-				-1.0
3,149,729	-				+0.7
3,149,729	-				-1.5
3,149,821	-				+0.1
3,149,823	-				+0.4
3,149,823	-				-3.5
3,149,842	+				+0.8
3,149,847	+				+0.6
3,149,855	-				-0.5
3,149,861	+				-1.0
3,149,861	+				-0.0
3,149,861	+				+0.5
3,149,861	+				+0.1
3,149,861	+				+0.5
3,149,869	-				-0.3
3,149,869	-				+1.5
3,149,869	-				+0.9
3,149,869	-				+0.7
3,149,869	-				-1.6
3,149,905	-				-0.4
3,149,924	+		PGA1_c30130	0.10	-0.8
3,149,949	+		PGA1_c30130	0.13	-0.8
3,149,963	-		PGA1_c30130	0.15	+0.2
3,149,963	-		PGA1_c30130	0.15	-2.0
3,150,035	+		PGA1_c30130	0.24	+0.9
3,150,056	-		PGA1_c30130	0.26	+0.6
3,150,070	-		PGA1_c30130	0.28	+0.8
3,150,093	+		PGA1_c30130	0.30	-0.2
3,150,196	-		PGA1_c30130	0.43	+0.2
3,150,215	+		PGA1_c30130	0.45	-0.2
3,150,226	+		PGA1_c30130	0.46	+0.4
3,150,250	+		PGA1_c30130	0.49	+0.2
3,150,295	-		PGA1_c30130	0.55	-0.1
3,150,376	-		PGA1_c30130	0.64	+0.9
3,150,378	+		PGA1_c30130	0.64	-2.2
3,150,464	-		PGA1_c30130	0.75	+0.1
3,150,489	+		PGA1_c30130	0.78	-0.8
3,150,517	-		PGA1_c30130	0.81	-2.9
3,150,611	+				+0.2
3,150,616	-				-0.5