Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c30090

Experiment: m.b. D-Cycloserine 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.0625 mg/ml
3,145,230	+				+0.1
3,145,230	+				+0.3
3,145,232	-				-0.5
3,145,257	+				+0.7
3,145,257	+				-0.6
3,145,338	+				+0.3
3,145,351	-				-0.1
3,145,351	-				+0.4
3,145,421	-		PGA1_c30080	0.19	+0.1
3,145,421	-		PGA1_c30080	0.19	+0.2
3,145,457	+		PGA1_c30080	0.24	-0.6
3,145,465	-		PGA1_c30080	0.25	+0.1
3,145,505	+		PGA1_c30080	0.30	+1.4
3,145,505	+		PGA1_c30080	0.30	-3.6
3,145,513	-		PGA1_c30080	0.31	+1.3
3,145,615	+		PGA1_c30080	0.44	-1.8
3,145,615	+		PGA1_c30080	0.44	-1.1
3,145,633	+		PGA1_c30080	0.46	-1.0
3,145,634	+		PGA1_c30080	0.46	-1.6
3,145,642	-		PGA1_c30080	0.47	+0.4
3,145,651	-		PGA1_c30080	0.49	+0.6
3,145,651	-		PGA1_c30080	0.49	-1.0
3,145,651	-		PGA1_c30080	0.49	+0.6
3,145,714	+		PGA1_c30080	0.57	-0.2
3,145,714	+		PGA1_c30080	0.57	-0.3
3,145,733	+		PGA1_c30080	0.59	+1.7
3,145,733	+		PGA1_c30080	0.59	-0.4
3,145,762	-		PGA1_c30080	0.63	+0.8
3,145,815	-		PGA1_c30080	0.70	+3.2
3,145,838	+		PGA1_c30080	0.73	+0.3
3,145,838	+		PGA1_c30080	0.73	+0.7
3,145,838	+		PGA1_c30080	0.73	-1.5
3,145,846	-		PGA1_c30080	0.74	-1.6
3,145,846	-		PGA1_c30080	0.74	+1.7
3,145,866	+		PGA1_c30080	0.76	+0.0
3,145,866	+		PGA1_c30080	0.76	-0.2
3,145,874	-		PGA1_c30080	0.77	+0.4
3,145,874	-		PGA1_c30080	0.77	+0.0
3,145,920	+		PGA1_c30080	0.83	+0.2
3,145,920	+		PGA1_c30080	0.83	-0.4
3,145,920	+		PGA1_c30080	0.83	+0.2
3,145,920	+		PGA1_c30080	0.83	-0.2
3,145,920	+		PGA1_c30080	0.83	-0.8
3,145,920	+		PGA1_c30080	0.83	-1.1
3,145,928	-		PGA1_c30080	0.84	-2.2
3,145,928	-		PGA1_c30080	0.84	+1.2
3,145,928	-		PGA1_c30080	0.84	+0.4
3,145,928	-		PGA1_c30080	0.84	-0.3
3,145,938	-		PGA1_c30080	0.86	-0.8
3,145,941	+		PGA1_c30080	0.86	-1.3
3,145,985	-				-0.1
3,145,985	-				+0.2
3,145,985	-				-0.2
3,146,018	+				+0.5
3,146,152	+				-2.2
3,146,152	+				+0.8
3,146,160	-				-0.1
3,146,160	-				+0.3
3,146,160	-				-0.4
3,146,160	-				-1.2
3,146,160	-				+4.0
3,146,160	-				-0.7
3,146,167	+				+0.7
3,146,198	+				+0.3
3,146,198	+				+0.3
3,146,198	+				-0.6
3,146,198	+				+0.8
3,146,198	+				-3.3
3,146,198	+				-0.2
3,146,198	+				+0.2
3,146,198	+				+1.1
3,146,198	+				+0.5
3,146,198	+				-1.0
3,146,206	-				+0.3
3,146,206	-				-2.2
3,146,206	-				+0.2
3,146,206	-				+0.2
3,146,206	-				-0.3
3,146,206	-				-0.2
3,146,206	-				+0.6
3,146,206	-				+1.5
3,146,206	-				-1.0
3,146,206	-				-1.0
3,146,206	-				+0.9
3,146,206	-				-0.2
3,146,206	-				-0.8
3,146,206	-				-2.7
3,146,206	-				-2.0
3,146,216	-				-0.5
3,146,246	+				+0.8
3,146,246	+				-2.5
3,146,246	+				+0.6
3,146,246	+				+2.0
3,146,254	-				-2.3
3,146,254	-				-0.2
3,146,254	-				+0.6
3,146,264	-				-2.1
3,146,284	-				-1.7
3,146,337	+		PGA1_c30090	0.16	-2.4
3,146,495	+		PGA1_c30090	0.34	-2.8
3,146,539	+		PGA1_c30090	0.39	+1.0
3,146,548	-		PGA1_c30090	0.40	-0.0
3,146,554	+		PGA1_c30090	0.41	+0.7
3,146,554	+		PGA1_c30090	0.41	-1.8
3,146,554	+		PGA1_c30090	0.41	-1.2
3,146,554	+		PGA1_c30090	0.41	-3.5
3,146,562	-		PGA1_c30090	0.41	-2.0
3,146,562	-		PGA1_c30090	0.41	-0.7
3,146,562	-		PGA1_c30090	0.41	-0.6
3,146,595	+		PGA1_c30090	0.45	+1.1
3,146,634	+		PGA1_c30090	0.50	+0.6
3,146,667	-		PGA1_c30090	0.54	-1.6
3,146,667	-		PGA1_c30090	0.54	+0.2
3,146,694	+		PGA1_c30090	0.57	+0.8
3,146,696	+		PGA1_c30090	0.57	-2.5
3,146,704	+		PGA1_c30090	0.58	-0.8
3,146,715	+		PGA1_c30090	0.59	+0.5
3,146,715	+		PGA1_c30090	0.59	-2.1
3,146,715	+		PGA1_c30090	0.59	-0.2
3,146,715	+		PGA1_c30090	0.59	-2.6
3,146,715	+		PGA1_c30090	0.59	+1.3
3,146,725	+		PGA1_c30090	0.60	+0.1
3,146,733	-		PGA1_c30090	0.61	-0.5
3,146,794	+		PGA1_c30090	0.68	+0.3
3,146,802	-		PGA1_c30090	0.69	-0.2
3,146,804	+		PGA1_c30090	0.69	-0.6
3,146,852	+		PGA1_c30090	0.75	-0.6
3,146,964	+		PGA1_c30090	0.88	-1.7
3,146,972	-		PGA1_c30090	0.89	+0.1
3,147,010	+				-0.2
3,147,010	+				+0.3
3,147,025	-				-0.2
3,147,161	-		PGA1_c30100	0.47	-2.5
3,147,161	-		PGA1_c30100	0.47	+0.2
3,147,161	-		PGA1_c30100	0.47	-1.5
3,147,161	-		PGA1_c30100	0.47	-2.0
3,147,227	-		PGA1_c30100	0.81	-2.9
3,147,257	-				-0.6
3,147,278	-				-1.0
3,147,303	-				-0.8
3,147,562	+		PGA1_c30110	0.39	+0.1
3,147,572	+		PGA1_c30110	0.40	-1.6
3,147,667	+		PGA1_c30110	0.53	-3.2
3,147,675	-		PGA1_c30110	0.55	-0.2
3,147,695	-		PGA1_c30110	0.57	+0.6
3,147,786	-		PGA1_c30110	0.70	+1.4
3,147,865	-		PGA1_c30110	0.81	-3.0
3,147,871	-		PGA1_c30110	0.81	+0.4
3,147,954	+				+1.6
3,147,959	-				-0.4
3,147,959	-				-0.0
3,147,960	+				-2.7
3,148,015	-				-0.7
3,148,025	-				-0.2