Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c29630

Experiment: m.b. D-Cycloserine 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.0625 mg/ml
3,096,808	+		PGA1_c29620	0.13	-1.3
3,096,816	-		PGA1_c29620	0.14	-0.5
3,096,895	+		PGA1_c29620	0.24	+0.6
3,096,895	+		PGA1_c29620	0.24	-1.3
3,096,903	-		PGA1_c29620	0.25	+0.7
3,096,936	+		PGA1_c29620	0.30	-1.5
3,097,140	-		PGA1_c29620	0.57	-2.3
3,097,149	+		PGA1_c29620	0.58	+0.7
3,097,345	+		PGA1_c29620	0.84	-0.9
3,097,353	-		PGA1_c29620	0.85	+0.2
3,097,490	-				+0.3
3,097,552	-				+1.2
3,097,561	+				-0.9
3,097,561	+				-1.5
3,097,566	+				+1.2
3,097,569	-				-0.2
3,097,569	-				-1.5
3,097,574	-				+0.6
3,097,581	-				+1.7
3,097,634	+				-1.4
3,097,675	-				-3.3
3,097,704	-				-1.2
3,097,709	-				+0.1
3,097,709	-				+1.4
3,097,713	+				+0.0
3,097,744	-				-0.3
3,097,744	-				-1.6
3,097,744	-				-0.3
3,097,757	+				-1.2
3,097,781	+				-1.7
3,097,802	+				+0.7
3,097,823	-				+0.6
3,097,823	-				-0.2
3,097,830	+				+0.3
3,097,895	+				+1.3
3,097,903	-				-0.8
3,097,903	-				-0.5
3,097,903	-				+0.6
3,097,903	-				+0.3
3,097,903	-				+0.4
3,097,903	-				+0.2
3,097,913	-				-0.3
3,097,913	-				-0.4
3,097,974	+		PGA1_c29630	0.14	-1.9
3,097,993	+		PGA1_c29630	0.16	-0.9
3,097,993	+		PGA1_c29630	0.16	-0.1
3,097,993	+		PGA1_c29630	0.16	+0.8
3,097,993	+		PGA1_c29630	0.16	-0.1
3,097,993	+		PGA1_c29630	0.16	-1.9
3,097,993	+		PGA1_c29630	0.16	-1.6
3,097,993	+		PGA1_c29630	0.16	-1.3
3,097,993	+		PGA1_c29630	0.16	+1.1
3,097,993	+		PGA1_c29630	0.16	-0.3
3,097,993	+		PGA1_c29630	0.16	-2.4
3,097,993	+		PGA1_c29630	0.16	+0.0
3,097,993	+		PGA1_c29630	0.16	+0.2
3,097,993	+		PGA1_c29630	0.16	+0.3
3,097,993	+		PGA1_c29630	0.16	-0.7
3,097,993	+		PGA1_c29630	0.16	-0.7
3,097,993	+		PGA1_c29630	0.16	-2.1
3,097,993	+		PGA1_c29630	0.16	+0.3
3,097,993	+		PGA1_c29630	0.16	+1.4
3,098,001	-		PGA1_c29630	0.16	+0.6
3,098,001	-		PGA1_c29630	0.16	-1.9
3,098,001	-		PGA1_c29630	0.16	-0.8
3,098,001	-		PGA1_c29630	0.16	-3.0
3,098,001	-		PGA1_c29630	0.16	-0.4
3,098,001	-		PGA1_c29630	0.16	-1.6
3,098,001	-		PGA1_c29630	0.16	+0.1
3,098,001	-		PGA1_c29630	0.16	-1.1
3,098,001	-		PGA1_c29630	0.16	-1.5
3,098,058	-		PGA1_c29630	0.21	+0.8
3,098,107	-		PGA1_c29630	0.25	-0.0
3,098,155	+		PGA1_c29630	0.29	+0.4
3,098,169	+		PGA1_c29630	0.30	-2.2
3,098,169	+		PGA1_c29630	0.30	-0.6
3,098,172	-		PGA1_c29630	0.30	-1.1
3,098,201	+		PGA1_c29630	0.33	-0.6
3,098,227	+		PGA1_c29630	0.35	+1.5
3,098,246	-		PGA1_c29630	0.36	-3.4
3,098,290	+		PGA1_c29630	0.40	+0.5
3,098,323	+		PGA1_c29630	0.43	-1.6
3,098,334	-		PGA1_c29630	0.44	-1.2
3,098,344	+		PGA1_c29630	0.45	-1.3
3,098,351	-		PGA1_c29630	0.45	-0.7
3,098,438	+		PGA1_c29630	0.52	+0.7
3,098,455	+		PGA1_c29630	0.54	-2.5
3,098,455	+		PGA1_c29630	0.54	-0.7
3,098,463	-		PGA1_c29630	0.54	+0.1
3,098,541	+		PGA1_c29630	0.61	-2.4
3,098,589	-		PGA1_c29630	0.65	-0.2
3,098,600	-		PGA1_c29630	0.66	-1.3
3,098,600	-		PGA1_c29630	0.66	-0.1
3,098,600	-		PGA1_c29630	0.66	+0.4
3,098,615	-		PGA1_c29630	0.67	+0.1
3,098,627	+		PGA1_c29630	0.68	+0.9
3,098,635	-		PGA1_c29630	0.69	-0.9
3,098,635	-		PGA1_c29630	0.69	+0.5
3,098,696	-		PGA1_c29630	0.74	-1.3
3,098,696	-		PGA1_c29630	0.74	-2.8
3,098,710	+		PGA1_c29630	0.75	+1.3
3,098,715	-		PGA1_c29630	0.75	+0.6
3,098,763	-		PGA1_c29630	0.79	-0.6
3,098,768	-		PGA1_c29630	0.80	+2.2
3,098,811	+		PGA1_c29630	0.83	+0.6
3,098,881	-		PGA1_c29630	0.89	-1.5
3,098,920	+				+0.4
3,098,920	+				+0.4
3,098,920	+				+0.7
3,098,920	+				+0.6
3,098,920	+				-1.9
3,098,920	+				-0.2
3,098,923	-				+0.3
3,098,928	-				+1.5
3,098,928	-				-0.0
3,098,928	-				+0.2
3,099,029	-				-0.7
3,099,049	-				+0.0
3,099,066	+				+2.4
3,099,067	-				-0.2
3,099,102	+				-1.6
3,099,102	+				+1.1
3,099,111	-				+2.6
3,099,134	+				-0.6
3,099,193	+				-0.1
3,099,193	+				+0.2
3,099,193	+				-3.2
3,099,193	+				+0.0
3,099,193	+				+0.1
3,099,201	-				-1.6
3,099,201	-				+0.4
3,099,201	-				+1.2
3,099,254	-				-0.7
3,099,273	+				-1.7
3,099,273	+				+0.4
3,099,336	+		PGA1_c29640	0.13	+0.6
3,099,344	-		PGA1_c29640	0.14	-0.0
3,099,359	+		PGA1_c29640	0.16	+0.1
3,099,385	+		PGA1_c29640	0.19	-2.3
3,099,398	-		PGA1_c29640	0.21	-1.3
3,099,399	-		PGA1_c29640	0.21	-0.9
3,099,425	-		PGA1_c29640	0.24	-1.4
3,099,425	-		PGA1_c29640	0.24	+1.7
3,099,466	+		PGA1_c29640	0.30	+2.5
3,099,504	+		PGA1_c29640	0.34	+0.5
3,099,608	-		PGA1_c29640	0.48	+0.7
3,099,650	-		PGA1_c29640	0.53	+0.1
3,099,707	-		PGA1_c29640	0.60	-0.2
3,099,712	-		PGA1_c29640	0.61	-0.2
3,099,716	+		PGA1_c29640	0.61	-0.1
3,099,724	-		PGA1_c29640	0.62	-2.8
3,099,724	-		PGA1_c29640	0.62	+0.6
3,099,724	-		PGA1_c29640	0.62	-0.6
3,099,737	+		PGA1_c29640	0.64	-0.3
3,099,737	+		PGA1_c29640	0.64	+2.1
3,099,745	-		PGA1_c29640	0.65	+0.7
3,099,747	-		PGA1_c29640	0.65	-0.8
3,099,752	-		PGA1_c29640	0.66	+2.0
3,099,823	-		PGA1_c29640	0.75	+0.9
3,099,844	-		PGA1_c29640	0.78	+0.1
3,099,845	-		PGA1_c29640	0.78	-1.4
3,099,845	-		PGA1_c29640	0.78	+0.7
3,099,899	-		PGA1_c29640	0.85	-0.4
3,099,967	-				-1.9
3,100,006	+				-1.2