Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28100

Experiment: m.b. D-Cycloserine 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.0625 mg/ml
2,933,024	-				+0.4
2,933,057	+				+0.5
2,933,186	-				-0.5
2,933,201	-				-1.0
2,933,217	-				+0.2
2,933,222	+				-2.0
2,933,230	-				+1.1
2,933,255	-				+2.7
2,933,283	+				-1.8
2,933,291	-				+0.3
2,933,303	+				-0.0
2,933,316	+				+1.4
2,933,316	+				+0.3
2,933,316	+				+0.5
2,933,324	+				+1.1
2,933,387	-				-0.0
2,933,387	-				+1.4
2,933,401	+				+0.5
2,933,402	-				+2.2
2,933,409	-				+0.1
2,933,414	-				-2.0
2,933,418	-				+1.1
2,933,450	+				+0.3
2,933,663	+		PGA1_c28100	0.20	-1.5
2,933,669	-		PGA1_c28100	0.21	+1.5
2,933,690	+		PGA1_c28100	0.22	-0.7
2,933,713	+		PGA1_c28100	0.24	-3.3
2,933,723	+		PGA1_c28100	0.24	+1.9
2,933,748	-		PGA1_c28100	0.26	+0.9
2,933,815	-		PGA1_c28100	0.31	-1.3
2,933,918	+		PGA1_c28100	0.38	-1.3
2,933,918	+		PGA1_c28100	0.38	-0.3
2,933,936	-		PGA1_c28100	0.39	-0.0
2,933,980	+		PGA1_c28100	0.42	-2.2
2,934,026	+		PGA1_c28100	0.45	-0.7
2,934,034	-		PGA1_c28100	0.46	-0.4
2,934,127	-		PGA1_c28100	0.52	+0.1
2,934,156	-		PGA1_c28100	0.54	+0.2
2,934,370	+		PGA1_c28100	0.69	-1.5
2,934,405	-		PGA1_c28100	0.72	-2.0
2,934,431	-		PGA1_c28100	0.73	-1.7
2,934,464	-		PGA1_c28100	0.76	+0.0
2,934,530	-		PGA1_c28100	0.80	+0.4
2,934,722	-				+1.1
2,934,727	+				-0.8
2,934,837	-				+0.5
2,934,844	-				-1.0
2,934,873	-				+0.1
2,934,886	-				-0.0
2,934,934	+				-2.8
2,935,082	+		PGA1_c28110	0.11	+0.5
2,935,084	+		PGA1_c28110	0.11	-0.3
2,935,172	-		PGA1_c28110	0.15	+1.3
2,935,238	+		PGA1_c28110	0.18	-0.2
2,935,246	-		PGA1_c28110	0.18	-0.5
2,935,259	-		PGA1_c28110	0.18	+0.8
2,935,279	-		PGA1_c28110	0.19	-2.9
2,935,283	-		PGA1_c28110	0.19	-0.8
2,935,355	+		PGA1_c28110	0.22	+0.5
2,935,395	+		PGA1_c28110	0.24	+0.3
2,935,397	+		PGA1_c28110	0.24	+1.4
2,935,564	+		PGA1_c28110	0.31	-0.0
2,935,646	-		PGA1_c28110	0.35	-0.5
2,935,659	-		PGA1_c28110	0.35	-1.3
2,935,714	+		PGA1_c28110	0.37	+0.2
2,935,750	+		PGA1_c28110	0.39	-0.7