Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c21790

Experiment: m.b. D-Cycloserine 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.0625 mg/ml
2,258,170	-		PGA1_c21780	0.51	-0.7
2,258,290	+		PGA1_c21780	0.57	+1.3
2,258,352	-		PGA1_c21780	0.61	+0.2
2,258,418	+		PGA1_c21780	0.65	+1.7
2,258,498	+		PGA1_c21780	0.69	-0.1
2,258,560	-		PGA1_c21780	0.73	+0.7
2,258,613	+		PGA1_c21780	0.76	+0.2
2,258,624	+		PGA1_c21780	0.76	-1.4
2,258,642	-		PGA1_c21780	0.77	-0.7
2,258,642	-		PGA1_c21780	0.77	-3.2
2,258,665	-		PGA1_c21780	0.78	+1.5
2,258,665	-		PGA1_c21780	0.78	+0.7
2,258,665	-		PGA1_c21780	0.78	-0.2
2,258,735	+		PGA1_c21780	0.82	-0.1
2,258,743	-		PGA1_c21780	0.83	-0.8
2,258,838	+		PGA1_c21780	0.88	+1.3
2,258,838	+		PGA1_c21780	0.88	-0.2
2,258,838	+		PGA1_c21780	0.88	+0.4
2,258,838	+		PGA1_c21780	0.88	-0.1
2,258,846	-		PGA1_c21780	0.89	+2.1
2,258,846	-		PGA1_c21780	0.89	-0.6
2,258,846	-		PGA1_c21780	0.89	-1.5
2,258,928	+				-0.0
2,259,039	-				+1.5
2,259,098	-				-2.1
2,259,098	-				-1.5
2,259,099	-				+0.2
2,259,114	+				-0.5
2,259,122	-				+1.4
2,259,141	-				-0.1
2,259,165	-				-1.4
2,259,165	-				+1.8
2,259,314	-				+0.5
2,259,340	+		PGA1_c21790	0.11	-1.6
2,259,340	+		PGA1_c21790	0.11	-1.9
2,259,348	-		PGA1_c21790	0.11	+0.4
2,259,348	-		PGA1_c21790	0.11	+1.1
2,259,376	-		PGA1_c21790	0.13	+0.0
2,259,510	-		PGA1_c21790	0.21	-0.5
2,259,517	+		PGA1_c21790	0.21	-0.2
2,259,543	-		PGA1_c21790	0.23	-2.0
2,259,544	-		PGA1_c21790	0.23	+0.4
2,259,569	+		PGA1_c21790	0.25	-0.4
2,259,591	+		PGA1_c21790	0.26	+0.5
2,259,596	+		PGA1_c21790	0.26	-1.0
2,259,671	-		PGA1_c21790	0.31	+0.4
2,259,744	+		PGA1_c21790	0.35	-1.1
2,259,903	+		PGA1_c21790	0.45	+0.2
2,259,906	-		PGA1_c21790	0.45	-0.0
2,259,950	+		PGA1_c21790	0.47	-0.1
2,259,968	+		PGA1_c21790	0.48	+0.5
2,259,968	+		PGA1_c21790	0.48	+1.8
2,259,981	+		PGA1_c21790	0.49	-1.8
2,259,994	-		PGA1_c21790	0.50	-1.1
2,259,994	-		PGA1_c21790	0.50	+3.1
2,260,053	-		PGA1_c21790	0.54	-0.1
2,260,166	+		PGA1_c21790	0.60	+0.3
2,260,166	+		PGA1_c21790	0.60	-0.5
2,260,174	-		PGA1_c21790	0.61	-0.7
2,260,174	-		PGA1_c21790	0.61	+0.7
2,260,181	+		PGA1_c21790	0.61	-2.1
2,260,182	+		PGA1_c21790	0.61	-1.0
2,260,189	-		PGA1_c21790	0.62	-1.6
2,260,192	+		PGA1_c21790	0.62	-0.5
2,260,235	+		PGA1_c21790	0.64	+0.7
2,260,235	+		PGA1_c21790	0.64	+0.0
2,260,235	+		PGA1_c21790	0.64	-0.0
2,260,235	+		PGA1_c21790	0.64	+1.8
2,260,235	+		PGA1_c21790	0.64	-0.2
2,260,235	+		PGA1_c21790	0.64	-1.5
2,260,235	+		PGA1_c21790	0.64	+0.7
2,260,243	-		PGA1_c21790	0.65	+0.1
2,260,243	-		PGA1_c21790	0.65	-0.8
2,260,243	-		PGA1_c21790	0.65	-0.0
2,260,243	-		PGA1_c21790	0.65	-1.3
2,260,243	-		PGA1_c21790	0.65	-2.6
2,260,265	-		PGA1_c21790	0.66	+2.0
2,260,265	-		PGA1_c21790	0.66	-0.3
2,260,310	+		PGA1_c21790	0.69	-2.6
2,260,318	-		PGA1_c21790	0.69	+0.4
2,260,560	-		PGA1_c21790	0.84	-1.1
2,260,569	+		PGA1_c21790	0.84	-0.4
2,260,722	+				-1.1
2,260,910	-				-0.1
2,260,985	-				-0.0
2,261,050	+				+3.1
2,261,083	+		PGA1_c21800	0.12	+2.2
2,261,149	+		PGA1_c21800	0.15	+0.3
2,261,172	+		PGA1_c21800	0.17	-0.3
2,261,340	-		PGA1_c21800	0.26	-0.2
2,261,421	+		PGA1_c21800	0.30	-2.0
2,261,555	+		PGA1_c21800	0.38	+0.3
2,261,730	+		PGA1_c21800	0.47	+1.8
2,261,730	+		PGA1_c21800	0.47	-1.0
2,261,730	+		PGA1_c21800	0.47	+2.2
2,261,730	+		PGA1_c21800	0.47	+1.0
2,261,730	+		PGA1_c21800	0.47	-3.2