Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2051 and HP15_2052 are separated by 192 nucleotides HP15_2052 and HP15_2053 are separated by 103 nucleotides
HP15_2051: HP15_2051 - inositol-5-monophosphate dehydrogenase, at 2,149,996 to 2,151,459
_2051
HP15_2052: HP15_2052 - exodeoxyribonuclease VII large subunit, at 2,151,652 to 2,153,040
_2052
HP15_2053: HP15_2053 - PrpE protein, at 2,153,144 to 2,155,018
_2053
Position (kb)
2151
2152
2153
2154 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 2151.572 kb on + strand at 2151.654 kb on + strand at 2151.673 kb on - strand at 2151.673 kb on - strand at 2151.779 kb on - strand at 2151.785 kb on - strand at 2151.870 kb on + strand, within HP15_2052 at 2151.878 kb on - strand, within HP15_2052 at 2152.008 kb on - strand, within HP15_2052 at 2152.069 kb on - strand, within HP15_2052 at 2152.071 kb on + strand, within HP15_2052 at 2152.084 kb on + strand, within HP15_2052 at 2152.194 kb on + strand, within HP15_2052 at 2152.266 kb on - strand, within HP15_2052 at 2152.318 kb on - strand, within HP15_2052 at 2152.408 kb on - strand, within HP15_2052 at 2152.493 kb on + strand, within HP15_2052 at 2152.493 kb on + strand, within HP15_2052 at 2152.501 kb on - strand, within HP15_2052 at 2152.501 kb on - strand, within HP15_2052 at 2152.527 kb on + strand, within HP15_2052 at 2152.577 kb on - strand, within HP15_2052 at 2152.648 kb on - strand, within HP15_2052 at 2152.811 kb on + strand, within HP15_2052 at 2152.811 kb on + strand, within HP15_2052 at 2152.811 kb on + strand, within HP15_2052 at 2152.890 kb on + strand, within HP15_2052 at 2152.945 kb on - strand at 2152.952 kb on - strand at 2152.952 kb on - strand at 2152.952 kb on - strand at 2153.034 kb on + strand at 2153.116 kb on - strand at 2153.134 kb on + strand at 2153.142 kb on - strand at 2153.387 kb on - strand, within HP15_2053 at 2153.387 kb on - strand, within HP15_2053 at 2153.469 kb on - strand, within HP15_2053 at 2153.701 kb on - strand, within HP15_2053 at 2153.743 kb on + strand, within HP15_2053 at 2153.879 kb on - strand, within HP15_2053 at 2153.885 kb on + strand, within HP15_2053 at 2153.886 kb on - strand, within HP15_2053 at 2153.886 kb on - strand, within HP15_2053 at 2153.931 kb on - strand, within HP15_2053 at 2153.979 kb on + strand, within HP15_2053 at 2154.015 kb on - strand, within HP15_2053
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 2,151,572 + -0.8 2,151,654 + +0.1 2,151,673 - -0.2 2,151,673 - +0.8 2,151,779 - -0.1 2,151,785 - +0.7 2,151,870 + HP15_2052 0.16 +1.0 2,151,878 - HP15_2052 0.16 +0.7 2,152,008 - HP15_2052 0.26 -1.5 2,152,069 - HP15_2052 0.30 +0.1 2,152,071 + HP15_2052 0.30 +0.9 2,152,084 + HP15_2052 0.31 -0.5 2,152,194 + HP15_2052 0.39 +0.4 2,152,266 - HP15_2052 0.44 +0.8 2,152,318 - HP15_2052 0.48 +0.1 2,152,408 - HP15_2052 0.54 +4.2 2,152,493 + HP15_2052 0.61 -0.7 2,152,493 + HP15_2052 0.61 +0.6 2,152,501 - HP15_2052 0.61 +1.1 2,152,501 - HP15_2052 0.61 -0.1 2,152,527 + HP15_2052 0.63 +0.6 2,152,577 - HP15_2052 0.67 +0.5 2,152,648 - HP15_2052 0.72 -0.1 2,152,811 + HP15_2052 0.83 -0.3 2,152,811 + HP15_2052 0.83 +0.4 2,152,811 + HP15_2052 0.83 -0.3 2,152,890 + HP15_2052 0.89 +0.9 2,152,945 - +1.0 2,152,952 - +0.1 2,152,952 - +0.6 2,152,952 - +0.6 2,153,034 + -0.1 2,153,116 - -0.8 2,153,134 + -0.3 2,153,142 - +0.4 2,153,387 - HP15_2053 0.13 -0.1 2,153,387 - HP15_2053 0.13 +1.7 2,153,469 - HP15_2053 0.17 -0.5 2,153,701 - HP15_2053 0.30 -0.3 2,153,743 + HP15_2053 0.32 -0.5 2,153,879 - HP15_2053 0.39 -0.3 2,153,885 + HP15_2053 0.40 -0.4 2,153,886 - HP15_2053 0.40 -0.8 2,153,886 - HP15_2053 0.40 -1.0 2,153,931 - HP15_2053 0.42 +0.6 2,153,979 + HP15_2053 0.45 -0.4 2,154,015 - HP15_2053 0.46 +2.1
Or see this region's nucleotide sequence