Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c21060

Experiment: m.b. D-Cycloserine 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.0625 mg/ml
2,182,166	+				+1.8
2,182,268	-		PGA1_c21040	0.33	+0.9
2,182,314	+		PGA1_c21040	0.46	+1.5
2,182,316	-		PGA1_c21040	0.46	+0.7
2,182,335	+		PGA1_c21040	0.51	+1.4
2,182,435	-		PGA1_c21040	0.78	-0.5
2,182,443	-		PGA1_c21040	0.80	-0.9
2,182,465	+		PGA1_c21040	0.86	-0.7
2,182,499	+				-0.2
2,182,522	+				+0.4
2,182,530	-				-0.6
2,182,530	-				-0.1
2,182,655	+		PGA1_c21050	0.31	-2.1
2,182,655	+		PGA1_c21050	0.31	-2.8
2,182,663	-		PGA1_c21050	0.34	+0.5
2,182,663	-		PGA1_c21050	0.34	+0.5
2,182,663	-		PGA1_c21050	0.34	-0.5
2,182,663	-		PGA1_c21050	0.34	-0.5
2,182,695	+		PGA1_c21050	0.44	+0.2
2,182,731	-		PGA1_c21050	0.55	-0.1
2,182,737	-		PGA1_c21050	0.57	-0.5
2,182,784	-		PGA1_c21050	0.71	-1.5
2,182,804	-		PGA1_c21050	0.78	-0.6
2,182,806	+		PGA1_c21050	0.78	-1.1
2,182,854	+				-0.5
2,182,908	-				-1.5
2,183,032	+				+1.2
2,183,032	+				+1.4
2,183,040	-				+1.0
2,183,057	+				+2.5
2,183,067	+				+1.1
2,183,135	+		PGA1_c21060	0.19	+1.1
2,183,143	-		PGA1_c21060	0.23	+0.5
2,183,161	-		PGA1_c21060	0.31	-0.5
2,183,170	+		PGA1_c21060	0.36	+0.7
2,183,170	+		PGA1_c21060	0.36	+0.5
2,183,187	+		PGA1_c21060	0.44	+0.9
2,183,202	+		PGA1_c21060	0.51	+1.6
2,183,207	+		PGA1_c21060	0.54	+0.5
2,183,207	+		PGA1_c21060	0.54	+1.7
2,183,215	-		PGA1_c21060	0.57	+1.5
2,183,324	-				+0.5
2,183,425	-				+1.8
2,183,425	-				+1.1
2,183,455	+				+0.5
2,183,455	+				+1.1
2,183,463	-				+1.5
2,183,463	-				+0.5
2,183,463	-				-1.3
2,183,472	+				+0.4
2,183,472	+				+0.5
2,183,472	+				+2.0
2,183,514	-				+0.5
2,183,524	-				+0.8
2,183,568	-		PGA1_c21070	0.11	+2.2
2,183,589	+		PGA1_c21070	0.13	+1.0
2,183,656	-		PGA1_c21070	0.17	+0.5
2,183,719	-		PGA1_c21070	0.22	+2.5
2,183,764	-		PGA1_c21070	0.25	-0.0
2,183,764	-		PGA1_c21070	0.25	+0.5
2,183,764	-		PGA1_c21070	0.25	+1.7
2,183,764	-		PGA1_c21070	0.25	+3.1
2,183,764	-		PGA1_c21070	0.25	-1.5
2,183,764	-		PGA1_c21070	0.25	+0.8
2,183,839	+		PGA1_c21070	0.30	+0.5
2,183,893	-		PGA1_c21070	0.34	+0.4
2,183,898	-		PGA1_c21070	0.34	-1.8
2,183,924	-		PGA1_c21070	0.36	-1.1
2,183,929	-		PGA1_c21070	0.36	+2.1
2,183,980	+		PGA1_c21070	0.40	-0.5
2,184,005	+		PGA1_c21070	0.41	+0.9
2,184,005	+		PGA1_c21070	0.41	-0.1
2,184,013	-		PGA1_c21070	0.42	+0.3
2,184,019	+		PGA1_c21070	0.42	-1.5
2,184,024	+		PGA1_c21070	0.43	-0.5
2,184,027	-		PGA1_c21070	0.43	-2.3
2,184,032	-		PGA1_c21070	0.43	-0.1
2,184,032	-		PGA1_c21070	0.43	+0.7
2,184,032	-		PGA1_c21070	0.43	-0.1
2,184,032	-		PGA1_c21070	0.43	-1.1
2,184,037	-		PGA1_c21070	0.43	+1.5
2,184,162	-		PGA1_c21070	0.52	+1.1
2,184,172	-		PGA1_c21070	0.53	-1.1
2,184,172	-		PGA1_c21070	0.53	+1.3
2,184,265	+		PGA1_c21070	0.59	+0.5