Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c20850

Experiment: m.b. D-Cycloserine 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.0625 mg/ml
2,160,435	+				+0.3
2,160,476	-				+0.8
2,160,476	-				+0.7
2,160,485	+				+0.7
2,160,486	+				-1.2
2,160,499	-				-0.2
2,160,512	-				+0.9
2,160,512	-				+0.8
2,160,518	+				+1.0
2,160,523	+				-0.3
2,160,523	+				-0.2
2,160,523	+				-0.5
2,160,523	+				-0.5
2,160,526	-				-0.9
2,160,538	+				+0.5
2,160,546	-				+1.8
2,160,557	+				+0.1
2,161,252	-				+1.1
2,161,301	+				+0.0
2,161,375	-				-0.6
2,161,385	-				-0.2
2,161,420	+				-0.1
2,161,438	-				+0.7
2,161,438	-				+0.2
2,161,511	+		PGA1_c20850	0.12	-2.7
2,161,577	+		PGA1_c20850	0.22	-1.8
2,161,577	+		PGA1_c20850	0.22	+0.5
2,161,585	-		PGA1_c20850	0.24	-0.6
2,161,585	-		PGA1_c20850	0.24	+1.0
2,161,585	-		PGA1_c20850	0.24	-1.6
2,161,696	+		PGA1_c20850	0.41	-0.8
2,161,704	-		PGA1_c20850	0.42	+0.2
2,161,741	-		PGA1_c20850	0.48	+1.3
2,161,775	+		PGA1_c20850	0.53	+0.5
2,161,783	-		PGA1_c20850	0.55	+0.8
2,161,786	+		PGA1_c20850	0.55	-0.5
2,161,786	+		PGA1_c20850	0.55	+0.2
2,161,794	-		PGA1_c20850	0.56	-1.2
2,161,794	-		PGA1_c20850	0.56	+1.1
2,161,888	-		PGA1_c20850	0.71	-0.9
2,161,947	+		PGA1_c20850	0.80	-0.6
2,161,974	-		PGA1_c20850	0.84	-2.9
2,161,979	+		PGA1_c20850	0.85	-0.1
2,161,986	+		PGA1_c20850	0.86	-1.9
2,161,987	-		PGA1_c20850	0.86	+0.2
2,161,994	-		PGA1_c20850	0.87	-0.4
2,161,994	-		PGA1_c20850	0.87	-1.4
2,162,020	+				-0.9
2,162,039	-				+1.1
2,162,039	-				+2.1
2,162,049	-				+2.1
2,162,059	-				+0.3
2,162,177	+				+0.2
2,162,322	+		PGA1_c20860	0.23	+1.5
2,162,322	+		PGA1_c20860	0.23	-0.4
2,162,347	+		PGA1_c20860	0.26	+0.7
2,162,348	+		PGA1_c20860	0.26	-0.4
2,162,385	-		PGA1_c20860	0.31	+0.0
2,162,435	-		PGA1_c20860	0.37	-0.3
2,162,486	+		PGA1_c20860	0.43	+0.8
2,162,486	+		PGA1_c20860	0.43	-1.5
2,162,488	+		PGA1_c20860	0.44	-0.5
2,162,494	-		PGA1_c20860	0.44	-0.0
2,162,494	-		PGA1_c20860	0.44	-1.5
2,162,494	-		PGA1_c20860	0.44	-0.2
2,162,557	+		PGA1_c20860	0.52	-1.8
2,162,557	+		PGA1_c20860	0.52	+1.1
2,162,560	-		PGA1_c20860	0.53	-1.2
2,162,565	-		PGA1_c20860	0.53	-0.7
2,162,615	+		PGA1_c20860	0.60	-0.2
2,162,624	+		PGA1_c20860	0.61	-0.1
2,162,678	-		PGA1_c20860	0.68	+0.0
2,162,764	+		PGA1_c20860	0.79	+0.8
2,162,795	+		PGA1_c20860	0.83	+0.3
2,162,798	-		PGA1_c20860	0.83	+0.9
2,162,798	-		PGA1_c20860	0.83	+1.7
2,162,803	-		PGA1_c20860	0.84	-0.3
2,162,803	-		PGA1_c20860	0.84	+1.5
2,162,900	+				-1.7
2,162,900	+				+0.5
2,162,900	+				-0.1
2,162,939	-				+1.0
2,162,998	-				-1.4
2,163,042	-				-0.7
2,163,042	-				+1.2
2,163,042	-				+0.4
2,163,052	-				-3.1