Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c11100

Experiment: m.b. D-Cycloserine 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.0625 mg/ml
1,147,092	+		PGA1_c11090	0.22	+0.7
1,147,092	+		PGA1_c11090	0.22	+1.7
1,147,162	+		PGA1_c11090	0.27	+3.0
1,147,194	+		PGA1_c11090	0.30	+0.4
1,147,261	+		PGA1_c11090	0.35	+0.0
1,147,301	+		PGA1_c11090	0.38	+1.7
1,147,434	-		PGA1_c11090	0.49	+0.9
1,147,482	+		PGA1_c11090	0.53	-1.3
1,147,490	-		PGA1_c11090	0.53	+0.7
1,147,497	+		PGA1_c11090	0.54	+0.4
1,147,497	+		PGA1_c11090	0.54	+0.1
1,147,497	+		PGA1_c11090	0.54	-1.1
1,147,505	-		PGA1_c11090	0.55	+3.7
1,147,514	-		PGA1_c11090	0.55	-2.3
1,147,534	+		PGA1_c11090	0.57	+1.4
1,147,588	-		PGA1_c11090	0.61	+0.3
1,147,635	+		PGA1_c11090	0.65	+1.3
1,147,674	+		PGA1_c11090	0.68	+2.3
1,147,729	-		PGA1_c11090	0.72	+0.5
1,147,729	-		PGA1_c11090	0.72	+2.4
1,147,809	+		PGA1_c11090	0.79	+0.7
1,147,843	+		PGA1_c11090	0.82	+0.2
1,147,866	+		PGA1_c11090	0.83	+1.4
1,147,871	+		PGA1_c11090	0.84	+0.7
1,147,878	+		PGA1_c11090	0.84	-0.7
1,147,926	+		PGA1_c11090	0.88	+1.5
1,147,926	+		PGA1_c11090	0.88	+0.2
1,147,934	-		PGA1_c11090	0.89	-1.1
1,147,934	-		PGA1_c11090	0.89	-0.9
1,147,954	+				+2.1
1,147,961	+				+0.5
1,148,009	+				+0.5
1,148,009	+				-0.1
1,148,017	-				+1.0
1,148,017	-				+2.2
1,148,017	-				+0.3
1,148,017	-				+0.7
1,148,017	-				+0.5
1,148,025	-				+0.9
1,148,064	+				+1.0
1,148,072	-				+1.3
1,148,088	+				+0.7
1,148,093	+				-0.2
1,148,096	-				+2.0
1,148,111	-				+0.1
1,148,133	+				+2.3
1,148,183	+		PGA1_c11100	0.18	-2.1
1,148,311	+		PGA1_c11100	0.42	+2.0
1,148,368	-		PGA1_c11100	0.53	-0.1
1,148,370	-		PGA1_c11100	0.54	-0.9
1,148,405	-		PGA1_c11100	0.60	+0.3
1,148,443	+		PGA1_c11100	0.68	+0.1
1,148,451	-		PGA1_c11100	0.69	+0.3
1,148,554	+		PGA1_c11100	0.89	+2.3
1,148,565	+				+0.2
1,148,565	+				+0.9
1,148,617	+				+1.3
1,148,617	+				-0.7
1,148,617	+				-1.7
1,148,625	-				-1.9
1,148,625	-				+0.1
1,148,625	-				-0.0
1,148,625	-				+0.3
1,148,625	-				+0.7
1,148,642	-				+0.9
1,148,705	+				-0.5
1,148,713	-				+1.3
1,148,773	-				-1.3
1,148,793	-				+3.3
1,149,167	-				+1.2
1,149,177	+				+2.5
1,149,182	+				-0.9
1,149,190	-				+0.7
1,149,242	+				-0.9
1,149,242	+				+1.2
1,149,276	-				+0.9
1,149,281	-				-0.3
1,149,283	+				-1.3
1,149,306	-				+0.7
1,149,325	-				-1.3
1,149,354	-				-0.7
1,149,375	+		PGA1_c11120	0.12	+0.1
1,149,383	-		PGA1_c11120	0.12	+0.2
1,149,390	-		PGA1_c11120	0.13	+3.0
1,149,424	+		PGA1_c11120	0.16	+0.3
1,149,432	-		PGA1_c11120	0.16	-0.5
1,149,547	-		PGA1_c11120	0.26	+2.3