Strain Fitness in Shewanella amazonensis SB2B around Sama_3107

Experiment: L-Glutamic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamic
3,678,198	+		Sama_3105	0.11	+0.4
3,678,198	+		Sama_3105	0.11	+0.1
3,678,198	+		Sama_3105	0.11	+0.5
3,678,198	+		Sama_3105	0.11	+0.3
3,678,199	-		Sama_3105	0.11	+1.3
3,678,199	-		Sama_3105	0.11	-0.7
3,678,199	-		Sama_3105	0.11	-0.3
3,678,199	-		Sama_3105	0.11	-0.4
3,678,201	+		Sama_3105	0.11	-0.4
3,678,201	+		Sama_3105	0.11	+0.3
3,678,202	-		Sama_3105	0.11	-0.1
3,678,202	-		Sama_3105	0.11	+0.0
3,678,202	-		Sama_3105	0.11	+0.7
3,678,244	+		Sama_3105	0.18	+0.0
3,678,244	+		Sama_3105	0.18	-0.1
3,678,244	+		Sama_3105	0.18	-0.1
3,678,245	-		Sama_3105	0.18	-1.0
3,678,291	+		Sama_3105	0.25	-0.3
3,678,291	+		Sama_3105	0.25	+1.7
3,678,315	+		Sama_3105	0.29	+0.3
3,678,316	-		Sama_3105	0.29	-0.3
3,678,316	-		Sama_3105	0.29	+0.7
3,678,316	-		Sama_3105	0.29	-0.2
3,678,334	+		Sama_3105	0.32	-0.3
3,678,334	+		Sama_3105	0.32	-0.6
3,678,334	+		Sama_3105	0.32	+1.0
3,678,334	+		Sama_3105	0.32	-1.1
3,678,334	+		Sama_3105	0.32	-0.0
3,678,334	+		Sama_3105	0.32	-0.3
3,678,334	+		Sama_3105	0.32	+0.7
3,678,334	+		Sama_3105	0.32	+1.2
3,678,334	+		Sama_3105	0.32	+0.6
3,678,334	+		Sama_3105	0.32	+0.4
3,678,334	+		Sama_3105	0.32	-0.4
3,678,334	+		Sama_3105	0.32	+1.5
3,678,334	+		Sama_3105	0.32	-0.2
3,678,334	+		Sama_3105	0.32	-1.3
3,678,334	+		Sama_3105	0.32	-1.1
3,678,334	+		Sama_3105	0.32	-0.3
3,678,334	+		Sama_3105	0.32	-0.0
3,678,335	-		Sama_3105	0.32	+0.7
3,678,335	-		Sama_3105	0.32	+1.4
3,678,335	-		Sama_3105	0.32	+1.1
3,678,335	-		Sama_3105	0.32	-0.4
3,678,335	-		Sama_3105	0.32	+0.5
3,678,335	-		Sama_3105	0.32	-0.9
3,678,335	-		Sama_3105	0.32	+1.0
3,678,335	-		Sama_3105	0.32	-1.4
3,678,335	-		Sama_3105	0.32	+0.7
3,678,368	+		Sama_3105	0.37	-0.2
3,678,368	+		Sama_3105	0.37	+0.7
3,678,369	-		Sama_3105	0.37	-0.3
3,678,369	-		Sama_3105	0.37	-1.1
3,678,415	-		Sama_3105	0.44	-0.1
3,678,436	+		Sama_3105	0.47	+0.2
3,678,436	+		Sama_3105	0.47	-1.4
3,678,437	-		Sama_3105	0.47	+1.0
3,678,455	+		Sama_3105	0.50	-1.8
3,678,455	+		Sama_3105	0.50	+1.3
3,678,455	+		Sama_3105	0.50	+1.2
3,678,455	+		Sama_3105	0.50	-0.1
3,678,455	+		Sama_3105	0.50	+0.4
3,678,456	-		Sama_3105	0.50	-0.3
3,678,456	-		Sama_3105	0.50	+0.2
3,678,461	+		Sama_3105	0.51	+0.7
3,678,461	+		Sama_3105	0.51	-1.0
3,678,461	+		Sama_3105	0.51	-2.8
3,678,461	+		Sama_3105	0.51	+0.5
3,678,462	-		Sama_3105	0.51	-1.6
3,678,462	-		Sama_3105	0.51	+0.9
3,678,462	-		Sama_3105	0.51	-0.2
3,678,462	-		Sama_3105	0.51	+2.0
3,678,462	-		Sama_3105	0.51	-0.6
3,678,494	+		Sama_3105	0.56	-0.1
3,678,494	+		Sama_3105	0.56	+0.4
3,678,494	+		Sama_3105	0.56	-0.8
3,678,494	+		Sama_3105	0.56	-0.3
3,678,495	-		Sama_3105	0.56	+0.7
3,678,495	-		Sama_3105	0.56	-0.2
3,678,495	-		Sama_3105	0.56	+0.7
3,678,495	-		Sama_3105	0.56	+0.2
3,678,495	-		Sama_3105	0.56	+0.7
3,678,495	-		Sama_3105	0.56	+0.3
3,678,495	-		Sama_3105	0.56	+1.1
3,678,495	-		Sama_3105	0.56	-0.1
3,678,495	-		Sama_3105	0.56	+0.4
3,678,495	-		Sama_3105	0.56	-0.5
3,678,497	+		Sama_3105	0.57	-0.5
3,678,497	+		Sama_3105	0.57	-1.7
3,678,497	+		Sama_3105	0.57	+0.2
3,678,497	+		Sama_3105	0.57	+0.2
3,678,520	+		Sama_3105	0.60	-0.6
3,678,520	+		Sama_3105	0.60	+0.3
3,678,556	+		Sama_3105	0.66	+0.7
3,678,556	+		Sama_3105	0.66	+0.2
3,678,556	+		Sama_3105	0.66	-1.7
3,678,557	-		Sama_3105	0.66	-1.8
3,678,557	-		Sama_3105	0.66	+1.3
3,678,557	-		Sama_3105	0.66	-0.5
3,678,557	-		Sama_3105	0.66	-0.7
3,678,557	-		Sama_3105	0.66	-1.3
3,678,557	-		Sama_3105	0.66	-0.3
3,678,557	-		Sama_3105	0.66	-0.7
3,678,712	+		Sama_3105	0.90	-0.0
3,678,712	+		Sama_3105	0.90	-0.4
3,678,712	+		Sama_3105	0.90	+0.0
3,678,712	+		Sama_3105	0.90	+0.9
3,678,712	+		Sama_3105	0.90	-0.7
3,678,712	+		Sama_3105	0.90	+0.1
3,678,712	+		Sama_3105	0.90	-0.4
3,678,712	+		Sama_3105	0.90	+0.4
3,678,712	+		Sama_3105	0.90	-0.3
3,678,713	-		Sama_3105	0.90	+1.1
3,678,713	-		Sama_3105	0.90	+0.2
3,678,713	-		Sama_3105	0.90	+0.2
3,678,713	-		Sama_3105	0.90	-0.1
3,678,713	-		Sama_3105	0.90	+0.9
3,678,713	-		Sama_3105	0.90	-1.8
3,678,713	-		Sama_3105	0.90	+0.4
3,678,713	-		Sama_3105	0.90	-0.1
3,678,713	-		Sama_3105	0.90	-0.1
3,678,713	-		Sama_3105	0.90	-0.3
3,678,713	-		Sama_3105	0.90	+0.7
3,678,713	-		Sama_3105	0.90	-0.1
3,678,713	-		Sama_3105	0.90	-0.1
3,678,716	+				-0.7
3,678,716	+				+0.2
3,678,716	+				-0.1
3,678,716	+				-0.3
3,678,716	+				-0.3
3,678,716	+				-0.0
3,678,716	+				+1.5
3,678,716	+				-0.1
3,678,716	+				-1.3
3,678,716	+				-0.7
3,678,716	+				-0.3
3,678,716	+				+0.7
3,678,716	+				+0.7
3,678,717	-				+1.7
3,678,717	-				+0.0
3,678,717	-				+1.2
3,678,717	-				-1.3
3,678,717	-				-1.8
3,678,717	-				+0.7
3,678,717	-				-0.4
3,678,717	-				+0.5
3,678,717	-				+0.3
3,678,722	+				-0.0
3,678,722	+				+0.2
3,678,722	+				-1.6
3,678,722	+				+0.2
3,678,722	+				+0.2
3,678,723	-				-0.3
3,678,723	-				+0.0
3,678,723	-				-0.0
3,678,723	-				-0.7
3,678,731	+				-0.0
3,678,826	+				-0.3
3,678,827	-				+1.0
3,678,827	-				+0.0
3,678,827	-				-0.8
3,678,827	-				+0.1
3,678,827	-				-2.6
3,678,827	-				+0.4
3,678,840	+				+0.9
3,678,841	-				-0.5
3,678,841	-				-0.2
3,678,858	+				-1.5
3,678,858	+				-0.8
3,678,858	+				-1.3
3,678,858	+				-0.7
3,678,858	+				-0.3
3,678,858	+				-0.3
3,678,859	-				-1.1
3,678,859	-				+0.7
3,678,859	-				+0.5
3,678,859	-				+0.2
3,678,930	+		Sama_3106	0.21	+0.7
3,678,931	-		Sama_3106	0.22	-0.1
3,678,931	-		Sama_3106	0.22	-0.6
3,678,931	-		Sama_3106	0.22	+1.2
3,678,931	-		Sama_3106	0.22	-0.1
3,678,931	-		Sama_3106	0.22	+0.7
3,678,931	-		Sama_3106	0.22	+1.3
3,678,940	+		Sama_3106	0.25	-0.3
3,678,940	+		Sama_3106	0.25	-0.3
3,678,940	+		Sama_3106	0.25	-0.7
3,678,940	+		Sama_3106	0.25	+0.6
3,678,949	+		Sama_3106	0.28	-1.1
3,678,950	-		Sama_3106	0.28	-2.0
3,678,950	-		Sama_3106	0.28	-0.6
3,678,950	-		Sama_3106	0.28	-1.7
3,679,011	+		Sama_3106	0.49	+3.4
3,679,012	-		Sama_3106	0.50	+1.7
3,679,024	-		Sama_3106	0.54	+0.5
3,679,024	-		Sama_3106	0.54	-1.6
3,679,031	+		Sama_3106	0.56	-0.8
3,679,031	+		Sama_3106	0.56	-0.4
3,679,031	+		Sama_3106	0.56	+0.4
3,679,031	+		Sama_3106	0.56	+0.2
3,679,031	+		Sama_3106	0.56	+3.1
3,679,031	+		Sama_3106	0.56	-0.9
3,679,031	+		Sama_3106	0.56	-0.3
3,679,031	+		Sama_3106	0.56	+0.4
3,679,031	+		Sama_3106	0.56	+0.5
3,679,031	+		Sama_3106	0.56	-0.6
3,679,031	+		Sama_3106	0.56	+0.3
3,679,031	+		Sama_3106	0.56	+3.7
3,679,031	+		Sama_3106	0.56	+0.0
3,679,031	+		Sama_3106	0.56	-1.1
3,679,031	+		Sama_3106	0.56	-0.2
3,679,031	+		Sama_3106	0.56	-0.7
3,679,031	+		Sama_3106	0.56	+0.2
3,679,032	-		Sama_3106	0.57	-0.4
3,679,032	-		Sama_3106	0.57	-0.3
3,679,032	-		Sama_3106	0.57	+0.3
3,679,032	-		Sama_3106	0.57	-0.1
3,679,032	-		Sama_3106	0.57	+0.7
3,679,032	-		Sama_3106	0.57	-2.1
3,679,032	-		Sama_3106	0.57	-0.3
3,679,032	-		Sama_3106	0.57	-1.3
3,679,032	-		Sama_3106	0.57	-1.3
3,679,032	-		Sama_3106	0.57	-0.3
3,679,032	-		Sama_3106	0.57	+0.6
3,679,032	-		Sama_3106	0.57	+1.1
3,679,032	-		Sama_3106	0.57	-0.3
3,679,032	-		Sama_3106	0.57	-0.3
3,679,041	+		Sama_3106	0.60	-0.6
3,679,042	-		Sama_3106	0.60	+0.1
3,679,042	-		Sama_3106	0.60	-0.0
3,679,042	-		Sama_3106	0.60	-0.4
3,679,114	+		Sama_3106	0.85	+0.2
3,679,114	+		Sama_3106	0.85	-0.4
3,679,114	+		Sama_3106	0.85	+0.2
3,679,115	-		Sama_3106	0.85	+0.0
3,679,125	+		Sama_3106	0.89	-0.3
3,679,126	-		Sama_3106	0.89	-0.6
3,679,134	+				-1.3
3,679,134	+				-1.3
3,679,134	+				-0.4
3,679,135	-				+0.7
3,679,135	-				+0.3
3,679,154	+				+0.1
3,679,154	+				+0.6
3,679,154	+				+0.6
3,679,154	+				+0.3
3,679,155	-				-0.8
3,679,155	-				+2.3
3,679,155	-				-0.4
3,679,155	-				+1.3
3,679,178	+				-0.7
3,679,178	+				+0.6
3,679,179	-				-1.4
3,679,179	-				+0.6
3,679,179	-				-1.5
3,679,203	-				-0.8
3,679,203	-				-0.6
3,679,231	+		Sama_3107	0.13	+0.0
3,679,231	+		Sama_3107	0.13	+0.1
3,679,231	+		Sama_3107	0.13	-0.0
3,679,231	+		Sama_3107	0.13	+0.9
3,679,232	-		Sama_3107	0.13	+2.3
3,679,290	+		Sama_3107	0.24	-0.2
3,679,291	-		Sama_3107	0.24	+0.4
3,679,291	-		Sama_3107	0.24	+5.4
3,679,384	+		Sama_3107	0.42	-1.4
3,679,385	-		Sama_3107	0.42	+1.4
3,679,385	-		Sama_3107	0.42	-2.0
3,679,385	-		Sama_3107	0.42	-0.2
3,679,385	-		Sama_3107	0.42	-1.3
3,679,426	-		Sama_3107	0.50	-0.6
3,679,426	-		Sama_3107	0.50	+2.5
3,679,426	-		Sama_3107	0.50	+0.5
3,679,426	-		Sama_3107	0.50	-1.1
3,679,459	+		Sama_3107	0.56	+0.7
3,679,472	+		Sama_3107	0.58	+0.3
3,679,473	-		Sama_3107	0.59	-1.4
3,679,499	+		Sama_3107	0.63	-0.7
3,679,499	+		Sama_3107	0.63	-0.3
3,679,500	-		Sama_3107	0.64	-0.2
3,679,511	+		Sama_3107	0.66	+1.3
3,679,511	+		Sama_3107	0.66	-0.8
3,679,512	-		Sama_3107	0.66	+0.8
3,679,650	+				-0.4
3,679,650	+				+0.2
3,679,650	+				-1.1
3,679,650	+				+0.3
3,679,650	+				+1.3
3,679,650	+				-0.8
3,679,650	+				+0.7
3,679,651	-				-0.2
3,679,651	-				+0.7
3,679,651	-				-0.3
3,679,651	-				+1.4
3,679,651	-				-0.3
3,679,651	-				+0.5
3,679,651	-				+0.9
3,679,665	-				+0.4
3,679,665	-				-1.0
3,679,665	-				+0.2
3,679,677	+				-0.6
3,679,786	-				-1.1
3,679,989	+		Sama_3108	0.10	+0.6
3,680,029	+		Sama_3108	0.12	-0.4
3,680,029	+		Sama_3108	0.12	+2.0
3,680,029	+		Sama_3108	0.12	+1.0
3,680,030	-		Sama_3108	0.12	+0.3
3,680,030	-		Sama_3108	0.12	-0.8
3,680,030	-		Sama_3108	0.12	-0.6
3,680,030	-		Sama_3108	0.12	-0.8
3,680,030	-		Sama_3108	0.12	-0.1
3,680,030	-		Sama_3108	0.12	-0.3
3,680,048	+		Sama_3108	0.13	-0.8
3,680,048	+		Sama_3108	0.13	+0.5
3,680,049	-		Sama_3108	0.13	-0.3
3,680,049	-		Sama_3108	0.13	-0.1
3,680,123	+		Sama_3108	0.16	+0.3
3,680,123	+		Sama_3108	0.16	-0.7
3,680,123	+		Sama_3108	0.16	+0.3
3,680,123	+		Sama_3108	0.16	+0.2
3,680,124	-		Sama_3108	0.16	-0.1
3,680,225	+		Sama_3108	0.21	-0.3
3,680,225	+		Sama_3108	0.21	+0.3
3,680,226	-		Sama_3108	0.21	+0.3
3,680,226	-		Sama_3108	0.21	+1.4
3,680,245	+		Sama_3108	0.22	+2.7
3,680,245	+		Sama_3108	0.22	-0.3
3,680,245	+		Sama_3108	0.22	+0.5
3,680,246	-		Sama_3108	0.22	-0.3
3,680,246	-		Sama_3108	0.22	-0.8
3,680,246	-		Sama_3108	0.22	-0.1
3,680,246	-		Sama_3108	0.22	-0.4
3,680,246	-		Sama_3108	0.22	-1.8
3,680,246	-		Sama_3108	0.22	-0.3
3,680,246	-		Sama_3108	0.22	+0.6
3,680,246	-		Sama_3108	0.22	+0.5
3,680,288	+		Sama_3108	0.24	-0.8
3,680,288	+		Sama_3108	0.24	+0.3
3,680,322	-		Sama_3108	0.26	-0.3
3,680,322	-		Sama_3108	0.26	+0.8
3,680,324	-		Sama_3108	0.26	+0.7
3,680,332	+		Sama_3108	0.26	-0.6
3,680,355	+		Sama_3108	0.27	+1.2
3,680,356	-		Sama_3108	0.27	-1.5
3,680,385	+		Sama_3108	0.29	+0.0
3,680,394	-		Sama_3108	0.29	-0.7
3,680,422	-		Sama_3108	0.30	+0.2
3,680,422	-		Sama_3108	0.30	+0.7
3,680,442	+		Sama_3108	0.31	-0.8
3,680,442	+		Sama_3108	0.31	-1.0
3,680,443	-		Sama_3108	0.31	-1.1
3,680,511	+		Sama_3108	0.35	-1.1
3,680,511	+		Sama_3108	0.35	-0.6
3,680,511	+		Sama_3108	0.35	+0.4
3,680,511	+		Sama_3108	0.35	-0.0
3,680,512	-		Sama_3108	0.35	-0.4
3,680,684	+		Sama_3108	0.43	-1.6
3,680,684	+		Sama_3108	0.43	+0.9
3,680,685	-		Sama_3108	0.43	-1.7
3,680,685	-		Sama_3108	0.43	+1.3