Experiment: Chloride 350 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO_A0093 and SOA0094 are separated by 109 nucleotides SOA0094 and SOA0095 are separated by 168 nucleotides SOA0095 and SOA0096 overlap by 1 nucleotides
SO_A0093: SO_A0093 - no description, at 72,253 to 73,026
_A0093
SOA0094: SOA0094 - hypothetical protein (NCBI ptt file), at 73,136 to 73,243
SOA0094
SOA0095: SOA0095 - partitioning protein A (NCBI ptt file), at 73,412 to 74,611
SOA0095
SOA0096: SOA0096 - partitioning protein B (NCBI ptt file), at 74,611 to 75,705
SOA0096
Position (kb) 73
74
75 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 73.082 kb on + strand at 73.082 kb on + strand at 73.084 kb on + strand at 73.090 kb on - strand at 73.192 kb on - strand, within SOA0094 at 73.200 kb on - strand, within SOA0094 at 73.205 kb on - strand, within SOA0094 at 73.205 kb on - strand, within SOA0094 at 73.205 kb on - strand, within SOA0094 at 73.216 kb on - strand, within SOA0094 at 73.292 kb on + strand at 73.292 kb on + strand at 73.455 kb on - strand at 73.541 kb on + strand, within SOA0095 at 73.574 kb on + strand, within SOA0095 at 73.799 kb on + strand, within SOA0095 at 73.799 kb on + strand, within SOA0095 at 73.825 kb on + strand, within SOA0095 at 73.830 kb on + strand, within SOA0095 at 73.833 kb on - strand, within SOA0095 at 73.836 kb on + strand, within SOA0095 at 73.862 kb on + strand, within SOA0095 at 74.034 kb on + strand, within SOA0095 at 74.034 kb on + strand, within SOA0095 at 74.110 kb on - strand, within SOA0095 at 74.167 kb on - strand, within SOA0095 at 74.235 kb on - strand, within SOA0095 at 74.287 kb on - strand, within SOA0095 at 74.287 kb on - strand, within SOA0095 at 74.287 kb on - strand, within SOA0095 at 74.299 kb on + strand, within SOA0095 at 74.388 kb on + strand, within SOA0095 at 74.475 kb on - strand, within SOA0095 at 74.475 kb on - strand, within SOA0095 at 74.488 kb on + strand, within SOA0095 at 74.496 kb on - strand at 74.503 kb on + strand at 74.511 kb on - strand at 74.638 kb on + strand at 74.646 kb on - strand at 74.746 kb on + strand, within SOA0096 at 74.791 kb on + strand, within SOA0096 at 74.801 kb on + strand, within SOA0096 at 74.896 kb on - strand, within SOA0096 at 74.904 kb on - strand, within SOA0096 at 74.911 kb on - strand, within SOA0096 at 74.911 kb on - strand, within SOA0096 at 74.932 kb on - strand, within SOA0096 at 75.111 kb on + strand, within SOA0096 at 75.118 kb on + strand, within SOA0096 at 75.119 kb on - strand, within SOA0096 at 75.172 kb on - strand, within SOA0096 at 75.177 kb on - strand, within SOA0096 at 75.214 kb on - strand, within SOA0096 at 75.216 kb on + strand, within SOA0096 at 75.224 kb on - strand, within SOA0096 at 75.258 kb on + strand, within SOA0096 at 75.261 kb on - strand, within SOA0096 at 75.471 kb on + strand, within SOA0096 at 75.528 kb on + strand, within SOA0096 at 75.536 kb on - strand, within SOA0096 at 75.536 kb on - strand, within SOA0096 at 75.536 kb on - strand, within SOA0096 at 75.568 kb on - strand, within SOA0096
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 350 mM remove 73,082 + -0.9 73,082 + +0.2 73,084 + -0.1 73,090 - +0.4 73,192 - SOA0094 0.52 +0.4 73,200 - SOA0094 0.59 +0.1 73,205 - SOA0094 0.64 +0.0 73,205 - SOA0094 0.64 -0.2 73,205 - SOA0094 0.64 +0.4 73,216 - SOA0094 0.74 -0.6 73,292 + +0.2 73,292 + +0.1 73,455 - -2.5 73,541 + SOA0095 0.11 -0.5 73,574 + SOA0095 0.14 -1.3 73,799 + SOA0095 0.32 -0.1 73,799 + SOA0095 0.32 -0.9 73,825 + SOA0095 0.34 -0.5 73,830 + SOA0095 0.35 -0.3 73,833 - SOA0095 0.35 -2.6 73,836 + SOA0095 0.35 -0.9 73,862 + SOA0095 0.38 -0.9 74,034 + SOA0095 0.52 -2.0 74,034 + SOA0095 0.52 +0.4 74,110 - SOA0095 0.58 -0.2 74,167 - SOA0095 0.63 -1.1 74,235 - SOA0095 0.69 -1.3 74,287 - SOA0095 0.73 -2.9 74,287 - SOA0095 0.73 -2.1 74,287 - SOA0095 0.73 -1.8 74,299 + SOA0095 0.74 -1.7 74,388 + SOA0095 0.81 -2.1 74,475 - SOA0095 0.89 -1.4 74,475 - SOA0095 0.89 +0.4 74,488 + SOA0095 0.90 -0.4 74,496 - -0.6 74,503 + +0.4 74,511 - -0.6 74,638 + -1.1 74,646 - -2.1 74,746 + SOA0096 0.12 -1.1 74,791 + SOA0096 0.16 -0.2 74,801 + SOA0096 0.17 -1.8 74,896 - SOA0096 0.26 -0.6 74,904 - SOA0096 0.27 -0.6 74,911 - SOA0096 0.27 -1.3 74,911 - SOA0096 0.27 -0.9 74,932 - SOA0096 0.29 -0.3 75,111 + SOA0096 0.46 -1.5 75,118 + SOA0096 0.46 -1.1 75,119 - SOA0096 0.46 -0.5 75,172 - SOA0096 0.51 -2.4 75,177 - SOA0096 0.52 -1.3 75,214 - SOA0096 0.55 -0.0 75,216 + SOA0096 0.55 -2.0 75,224 - SOA0096 0.56 -2.0 75,258 + SOA0096 0.59 -1.8 75,261 - SOA0096 0.59 -1.1 75,471 + SOA0096 0.79 -1.4 75,528 + SOA0096 0.84 -0.7 75,536 - SOA0096 0.84 -0.3 75,536 - SOA0096 0.84 +1.3 75,536 - SOA0096 0.84 -1.4 75,568 - SOA0096 0.87 -0.9
Or see this region's nucleotide sequence