Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c30750

Experiment: m.b. Lomefloxacin 0.00078125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Lomefloxacin 0.00078125 mM
3,210,657	+		PGA1_c30720	0.51	+0.5
3,210,658	-		PGA1_c30720	0.51	+0.0
3,210,676	+		PGA1_c30720	0.57	-0.0
3,210,705	-		PGA1_c30720	0.67	-1.1
3,210,705	-		PGA1_c30720	0.67	+0.5
3,210,705	-		PGA1_c30720	0.67	-0.1
3,210,707	-		PGA1_c30720	0.67	-0.3
3,210,712	-		PGA1_c30720	0.69	-1.1
3,210,717	-		PGA1_c30720	0.71	+0.6
3,210,717	-		PGA1_c30720	0.71	+0.6
3,210,717	-		PGA1_c30720	0.71	-0.4
3,210,734	-		PGA1_c30720	0.76	-1.4
3,210,744	-		PGA1_c30720	0.80	+1.3
3,210,744	-		PGA1_c30720	0.80	+1.7
3,210,752	+		PGA1_c30720	0.82	-0.4
3,210,753	+		PGA1_c30720	0.83	-0.0
3,210,753	+		PGA1_c30720	0.83	+0.7
3,210,753	+		PGA1_c30720	0.83	+0.2
3,210,753	+		PGA1_c30720	0.83	+0.2
3,210,753	+		PGA1_c30720	0.83	+0.6
3,210,753	+		PGA1_c30720	0.83	+0.6
3,210,753	+		PGA1_c30720	0.83	+0.6
3,210,753	+		PGA1_c30720	0.83	-1.1
3,210,753	+		PGA1_c30720	0.83	-1.2
3,210,753	+		PGA1_c30720	0.83	+0.5
3,210,753	+		PGA1_c30720	0.83	-0.2
3,210,753	+		PGA1_c30720	0.83	+0.1
3,210,753	+		PGA1_c30720	0.83	+0.5
3,210,753	+		PGA1_c30720	0.83	-1.6
3,210,753	+		PGA1_c30720	0.83	-1.0
3,210,753	+		PGA1_c30720	0.83	-2.1
3,210,753	+		PGA1_c30720	0.83	+0.9
3,210,753	+		PGA1_c30720	0.83	+0.7
3,210,753	+		PGA1_c30720	0.83	-0.6
3,210,761	-		PGA1_c30720	0.86	-2.2
3,210,761	-		PGA1_c30720	0.86	-2.1
3,210,761	-		PGA1_c30720	0.86	+0.2
3,210,761	-		PGA1_c30720	0.86	-0.2
3,210,761	-		PGA1_c30720	0.86	+0.2
3,210,761	-		PGA1_c30720	0.86	+1.7
3,210,806	+				-1.6
3,210,806	+				-2.6
3,210,806	+				-1.5
3,210,814	-				-0.5
3,210,814	-				-0.0
3,210,814	-				-2.6
3,210,814	-				+0.1
3,210,820	-				-0.2
3,210,820	-				-0.7
3,210,841	-				-0.9
3,210,899	+		PGA1_c30730	0.22	-0.8
3,210,899	+		PGA1_c30730	0.22	-2.5
3,210,935	+		PGA1_c30730	0.30	+0.1
3,210,956	-		PGA1_c30730	0.35	-2.5
3,210,967	-		PGA1_c30730	0.38	+0.3
3,210,977	-		PGA1_c30730	0.40	+0.7
3,210,995	+		PGA1_c30730	0.44	-0.3
3,211,000	+		PGA1_c30730	0.45	-0.5
3,211,002	-		PGA1_c30730	0.46	+1.0
3,211,010	+		PGA1_c30730	0.48	+1.8
3,211,037	+		PGA1_c30730	0.54	-1.0
3,211,045	-		PGA1_c30730	0.56	+0.8
3,211,045	-		PGA1_c30730	0.56	-0.8
3,211,076	+		PGA1_c30730	0.63	+0.1
3,211,084	+		PGA1_c30730	0.65	+1.9
3,211,093	-		PGA1_c30730	0.67	-1.0
3,211,138	+		PGA1_c30730	0.78	+1.4
3,211,148	-		PGA1_c30730	0.80	-0.6
3,211,236	-				+0.5
3,211,361	+				-1.4
3,211,394	-		PGA1_c30740	0.12	-0.3
3,211,394	-		PGA1_c30740	0.12	-1.5
3,211,419	+		PGA1_c30740	0.24	-0.7
3,211,419	+		PGA1_c30740	0.24	+1.6
3,211,419	+		PGA1_c30740	0.24	-0.1
3,211,419	+		PGA1_c30740	0.24	-0.4
3,211,419	+		PGA1_c30740	0.24	+0.1
3,211,419	+		PGA1_c30740	0.24	+0.9
3,211,419	+		PGA1_c30740	0.24	+0.1
3,211,419	+		PGA1_c30740	0.24	+1.7
3,211,419	+		PGA1_c30740	0.24	-1.8
3,211,419	+		PGA1_c30740	0.24	-0.1
3,211,419	+		PGA1_c30740	0.24	+0.1
3,211,427	-		PGA1_c30740	0.28	-0.7
3,211,427	-		PGA1_c30740	0.28	-0.8
3,211,427	-		PGA1_c30740	0.28	+0.9
3,211,427	-		PGA1_c30740	0.28	+1.1
3,211,427	-		PGA1_c30740	0.28	+0.7
3,211,427	-		PGA1_c30740	0.28	-0.2
3,211,427	-		PGA1_c30740	0.28	-2.0
3,211,427	-		PGA1_c30740	0.28	-2.9
3,211,427	-		PGA1_c30740	0.28	-0.4
3,211,427	-		PGA1_c30740	0.28	-0.3
3,211,427	-		PGA1_c30740	0.28	+0.1
3,211,427	-		PGA1_c30740	0.28	+0.0
3,211,427	-		PGA1_c30740	0.28	+0.5
3,211,427	-		PGA1_c30740	0.28	+1.3
3,211,427	-		PGA1_c30740	0.28	-0.1
3,211,427	-		PGA1_c30740	0.28	-3.1
3,211,427	-		PGA1_c30740	0.28	-0.1
3,211,427	-		PGA1_c30740	0.28	+0.1
3,211,427	-		PGA1_c30740	0.28	-1.0
3,211,427	-		PGA1_c30740	0.28	+1.7
3,211,446	+		PGA1_c30740	0.37	-1.1
3,211,446	+		PGA1_c30740	0.37	+0.8
3,211,452	-		PGA1_c30740	0.40	+1.1
3,211,452	-		PGA1_c30740	0.40	+0.7
3,211,452	-		PGA1_c30740	0.40	+0.4
3,211,452	-		PGA1_c30740	0.40	+0.6
3,211,461	+		PGA1_c30740	0.44	-0.3
3,211,519	-		PGA1_c30740	0.72	-0.5
3,211,521	+		PGA1_c30740	0.73	+0.1
3,211,542	+		PGA1_c30740	0.84	-0.2
3,211,550	-		PGA1_c30740	0.87	+0.6
3,211,550	-		PGA1_c30740	0.87	+0.4
3,211,566	+				+0.5
3,211,634	+		PGA1_c30750	0.18	+0.5
3,211,634	+		PGA1_c30750	0.18	+0.8
3,211,642	-		PGA1_c30750	0.22	+0.9
3,211,642	-		PGA1_c30750	0.22	-1.0
3,211,644	+		PGA1_c30750	0.22	+0.8
3,211,644	+		PGA1_c30750	0.22	-0.2
3,211,644	+		PGA1_c30750	0.22	-0.2
3,211,680	+		PGA1_c30750	0.38	-0.8
3,211,683	+		PGA1_c30750	0.39	+0.5
3,211,683	+		PGA1_c30750	0.39	+1.0
3,211,691	-		PGA1_c30750	0.42	+1.0
3,211,691	-		PGA1_c30750	0.42	+1.5
3,211,692	+		PGA1_c30750	0.43	+1.3
3,211,692	+		PGA1_c30750	0.43	+0.5
3,211,692	+		PGA1_c30750	0.43	+1.1
3,211,692	+		PGA1_c30750	0.43	-0.4
3,211,700	-		PGA1_c30750	0.46	+0.6
3,211,700	-		PGA1_c30750	0.46	+0.6
3,211,726	+		PGA1_c30750	0.57	-1.3
3,211,733	-		PGA1_c30750	0.60	-1.4
3,211,734	+		PGA1_c30750	0.60	+0.4
3,211,734	+		PGA1_c30750	0.60	+0.8
3,211,734	+		PGA1_c30750	0.60	+0.5
3,211,742	-		PGA1_c30750	0.64	+0.7
3,211,759	-		PGA1_c30750	0.71	-0.5
3,211,779	+		PGA1_c30750	0.79	+0.6
3,211,821	+				-0.4
3,211,835	+				+0.5
3,211,841	+				+0.2
3,211,841	+				+1.0
3,211,841	+				+0.8
3,211,849	-				-1.4
3,211,849	-				-0.3
3,211,849	-				+0.7
3,211,920	-				-1.4
3,211,920	-				-0.3
3,211,920	-				+0.1
3,211,924	+				+2.0
3,212,006	+		PGA1_c30760	0.16	-0.6
3,212,014	-		PGA1_c30760	0.17	+0.9
3,212,020	-		PGA1_c30760	0.17	+0.2
3,212,053	-		PGA1_c30760	0.20	+0.2
3,212,070	-		PGA1_c30760	0.22	-2.9
3,212,070	-		PGA1_c30760	0.22	-1.5
3,212,070	-		PGA1_c30760	0.22	-0.3
3,212,096	+		PGA1_c30760	0.24	-0.4
3,212,096	+		PGA1_c30760	0.24	+0.0
3,212,113	+		PGA1_c30760	0.26	+1.0
3,212,113	+		PGA1_c30760	0.26	+0.5
3,212,113	+		PGA1_c30760	0.26	+0.8
3,212,121	-		PGA1_c30760	0.26	+0.4
3,212,121	-		PGA1_c30760	0.26	-0.3
3,212,121	-		PGA1_c30760	0.26	+0.1
3,212,155	-		PGA1_c30760	0.29	+0.3
3,212,155	-		PGA1_c30760	0.29	-0.5
3,212,165	-		PGA1_c30760	0.30	-0.2
3,212,199	+		PGA1_c30760	0.33	-0.4
3,212,265	+		PGA1_c30760	0.39	+0.5
3,212,265	+		PGA1_c30760	0.39	+1.0
3,212,265	+		PGA1_c30760	0.39	-0.7
3,212,324	+		PGA1_c30760	0.45	-1.9
3,212,347	+		PGA1_c30760	0.47	+0.5
3,212,347	+		PGA1_c30760	0.47	-1.3
3,212,347	+		PGA1_c30760	0.47	-0.3
3,212,347	+		PGA1_c30760	0.47	+0.7
3,212,355	-		PGA1_c30760	0.47	+0.5
3,212,355	-		PGA1_c30760	0.47	-1.1
3,212,355	-		PGA1_c30760	0.47	-0.3
3,212,355	-		PGA1_c30760	0.47	-0.3
3,212,355	-		PGA1_c30760	0.47	-0.2
3,212,375	-		PGA1_c30760	0.49	-0.2
3,212,375	-		PGA1_c30760	0.49	-0.9
3,212,375	-		PGA1_c30760	0.49	-0.7
3,212,380	-		PGA1_c30760	0.50	+0.7
3,212,383	+		PGA1_c30760	0.50	+0.3
3,212,383	+		PGA1_c30760	0.50	-0.1
3,212,391	-		PGA1_c30760	0.51	+0.6
3,212,391	-		PGA1_c30760	0.51	+0.0
3,212,391	-		PGA1_c30760	0.51	+1.4
3,212,400	+		PGA1_c30760	0.51	-1.9
3,212,401	+		PGA1_c30760	0.52	+0.2
3,212,408	-		PGA1_c30760	0.52	+1.2
3,212,425	+		PGA1_c30760	0.54	+0.2
3,212,425	+		PGA1_c30760	0.54	-0.3
3,212,425	+		PGA1_c30760	0.54	-0.5
3,212,425	+		PGA1_c30760	0.54	-1.3
3,212,433	-		PGA1_c30760	0.54	-0.7
3,212,443	+		PGA1_c30760	0.55	-0.9
3,212,443	+		PGA1_c30760	0.55	+0.8
3,212,443	-		PGA1_c30760	0.55	-0.5
3,212,451	-		PGA1_c30760	0.56	+0.9
3,212,460	+		PGA1_c30760	0.57	-0.9
3,212,480	+		PGA1_c30760	0.59	-1.3
3,212,530	+		PGA1_c30760	0.63	+1.6
3,212,530	+		PGA1_c30760	0.63	+0.4
3,212,538	-		PGA1_c30760	0.64	+0.3
3,212,538	-		PGA1_c30760	0.64	-0.1
3,212,548	+		PGA1_c30760	0.65	-0.3
3,212,555	+		PGA1_c30760	0.65	-3.2
3,212,575	+		PGA1_c30760	0.67	+0.2
3,212,606	+		PGA1_c30760	0.70	-0.9
3,212,606	+		PGA1_c30760	0.70	-0.4
3,212,606	+		PGA1_c30760	0.70	+0.5
3,212,614	-		PGA1_c30760	0.71	-1.0
3,212,632	-		PGA1_c30760	0.72	-1.0
3,212,634	+		PGA1_c30760	0.73	-0.3
3,212,642	-		PGA1_c30760	0.73	-1.7
3,212,642	-		PGA1_c30760	0.73	+0.2
3,212,642	-		PGA1_c30760	0.73	+0.1
3,212,693	+		PGA1_c30760	0.78	+1.1
3,212,699	-		PGA1_c30760	0.78	-1.4
3,212,701	-		PGA1_c30760	0.79	-0.9
3,212,701	-		PGA1_c30760	0.79	-0.8
3,212,701	-		PGA1_c30760	0.79	+0.0
3,212,702	-		PGA1_c30760	0.79	-0.1
3,212,708	-		PGA1_c30760	0.79	-0.5
3,212,734	+		PGA1_c30760	0.81	-0.3
3,212,742	-		PGA1_c30760	0.82	+0.9
3,212,742	-		PGA1_c30760	0.82	-1.9
3,212,742	-		PGA1_c30760	0.82	-1.9
3,212,789	-		PGA1_c30760	0.86	+0.7
3,212,820	-		PGA1_c30760	0.89	+0.4
3,212,826	+		PGA1_c30760	0.90	+0.7