Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28200

Experiment: m.b. Lomefloxacin 0.00078125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Lomefloxacin 0.00078125 mM
2,944,202	-				-0.1
2,944,225	-				-0.8
2,944,275	+				-1.6
2,944,275	+				-1.9
2,944,275	+				-0.5
2,944,275	+				-0.5
2,944,283	-				-0.3
2,944,294	+		PGA1_c28190	0.10	-1.9
2,944,302	+		PGA1_c28190	0.11	-1.6
2,944,302	+		PGA1_c28190	0.11	-0.3
2,944,310	-		PGA1_c28190	0.12	-0.1
2,944,319	+		PGA1_c28190	0.13	+0.4
2,944,319	+		PGA1_c28190	0.13	+0.8
2,944,350	+		PGA1_c28190	0.16	-0.6
2,944,358	-		PGA1_c28190	0.17	-0.2
2,944,358	-		PGA1_c28190	0.17	-1.9
2,944,358	-		PGA1_c28190	0.17	-1.4
2,944,424	+		PGA1_c28190	0.24	+1.3
2,944,432	-		PGA1_c28190	0.25	+0.6
2,944,610	+		PGA1_c28190	0.43	-2.1
2,944,610	+		PGA1_c28190	0.43	-0.5
2,944,610	+		PGA1_c28190	0.43	-0.4
2,944,610	-		PGA1_c28190	0.43	+1.4
2,944,728	-		PGA1_c28190	0.56	+0.1
2,944,728	-		PGA1_c28190	0.56	-0.3
2,944,756	+		PGA1_c28190	0.58	+1.5
2,944,764	-		PGA1_c28190	0.59	-0.3
2,944,789	-		PGA1_c28190	0.62	+0.4
2,944,858	+		PGA1_c28190	0.69	+0.1
2,944,866	-		PGA1_c28190	0.70	+0.1
2,944,888	+		PGA1_c28190	0.72	+0.3
2,944,900	+		PGA1_c28190	0.74	+0.6
2,944,923	+		PGA1_c28190	0.76	+0.3
2,944,929	-		PGA1_c28190	0.77	-0.6
2,945,024	+		PGA1_c28190	0.87	+0.4
2,945,025	-		PGA1_c28190	0.87	-0.6
2,945,101	-				-0.6
2,945,188	+				+0.0
2,945,208	+				+1.0
2,945,236	+				-1.0
2,945,305	-		PGA1_c28200	0.14	+2.2
2,945,382	-		PGA1_c28200	0.21	-1.3
2,945,585	+		PGA1_c28200	0.39	+0.4
2,945,593	-		PGA1_c28200	0.40	-1.1
2,945,609	+		PGA1_c28200	0.41	+2.2
2,945,707	+		PGA1_c28200	0.50	+1.1
2,945,715	-		PGA1_c28200	0.51	+1.7
2,945,755	-		PGA1_c28200	0.55	+0.1
2,945,867	+		PGA1_c28200	0.65	+0.9
2,945,875	+		PGA1_c28200	0.65	-0.3
2,945,875	-		PGA1_c28200	0.65	-0.4
2,945,875	-		PGA1_c28200	0.65	+0.1
2,945,880	+		PGA1_c28200	0.66	-1.1
2,945,910	+		PGA1_c28200	0.68	+1.2
2,946,044	+		PGA1_c28200	0.81	+1.7
2,946,044	+		PGA1_c28200	0.81	-1.1
2,946,049	+		PGA1_c28200	0.81	+1.8
2,946,054	+		PGA1_c28200	0.81	+1.3
2,946,115	+		PGA1_c28200	0.87	-0.2
2,946,118	-		PGA1_c28200	0.87	+1.6
2,946,123	-		PGA1_c28200	0.88	-0.4
2,946,127	+		PGA1_c28200	0.88	+1.2
2,946,140	-		PGA1_c28200	0.89	+0.9
2,946,155	+				-0.9
2,946,155	+				-0.6
2,946,158	-				-0.3
2,946,163	-				+2.2
2,946,163	-				-0.5
2,946,163	-				+1.7
2,946,163	-				-2.4
2,946,163	-				+0.9
2,946,163	-				-2.6
2,946,198	+				-0.8
2,946,249	-				-0.6
2,946,275	+				+0.2
2,946,286	+				+0.7
2,946,287	+				-1.4
2,946,338	-		PGA1_c28210	0.12	+2.4
2,946,345	+		PGA1_c28210	0.13	-0.6
2,946,345	+		PGA1_c28210	0.13	-0.3
2,946,479	+		PGA1_c28210	0.33	+1.4
2,946,495	+		PGA1_c28210	0.35	+0.1
2,946,495	+		PGA1_c28210	0.35	+0.7
2,946,500	+		PGA1_c28210	0.36	-0.1
2,946,503	-		PGA1_c28210	0.36	-0.7
2,946,510	-		PGA1_c28210	0.37	+0.6
2,946,523	-		PGA1_c28210	0.39	-1.0
2,946,525	+		PGA1_c28210	0.39	-1.8
2,946,596	-		PGA1_c28210	0.50	-0.8
2,946,598	+		PGA1_c28210	0.50	-1.9
2,946,604	+		PGA1_c28210	0.51	-0.6
2,946,611	-		PGA1_c28210	0.52	-0.2
2,946,653	+		PGA1_c28210	0.58	+0.1
2,946,666	-		PGA1_c28210	0.60	-2.9
2,946,685	+		PGA1_c28210	0.63	+0.2
2,946,685	+		PGA1_c28210	0.63	+0.8
2,946,688	-		PGA1_c28210	0.64	-0.2
2,946,693	-		PGA1_c28210	0.64	+0.9
2,946,693	-		PGA1_c28210	0.64	+0.9
2,946,740	+		PGA1_c28210	0.71	-0.6
2,946,748	-		PGA1_c28210	0.73	-1.4
2,946,755	+		PGA1_c28210	0.74	+0.8
2,946,758	+		PGA1_c28210	0.74	-1.1
2,946,766	-		PGA1_c28210	0.75	+0.9
2,946,804	+		PGA1_c28210	0.81	-0.1
2,946,804	+		PGA1_c28210	0.81	+0.4
2,946,804	+		PGA1_c28210	0.81	-2.4
2,946,810	+		PGA1_c28210	0.82	+1.2
2,946,812	-		PGA1_c28210	0.82	+1.4
2,946,812	-		PGA1_c28210	0.82	+0.4
2,946,842	+		PGA1_c28210	0.87	-0.0
2,946,852	+		PGA1_c28210	0.88	+0.2
2,946,852	+		PGA1_c28210	0.88	-1.0
2,946,852	+		PGA1_c28210	0.88	+1.0
2,946,852	+		PGA1_c28210	0.88	-2.2
2,946,852	+		PGA1_c28210	0.88	-1.2
2,946,852	+		PGA1_c28210	0.88	+0.2
2,946,852	+		PGA1_c28210	0.88	+1.6
2,946,852	+		PGA1_c28210	0.88	+1.1
2,946,852	+		PGA1_c28210	0.88	+0.4
2,946,859	+		PGA1_c28210	0.89	+0.6
2,946,860	-		PGA1_c28210	0.89	-2.8
2,946,860	-		PGA1_c28210	0.89	+1.0
2,946,860	-		PGA1_c28210	0.89	+0.8
2,946,860	-		PGA1_c28210	0.89	+0.0
2,946,860	-		PGA1_c28210	0.89	+1.4
2,946,860	-		PGA1_c28210	0.89	-1.0
2,946,860	-		PGA1_c28210	0.89	+1.7
2,946,860	-		PGA1_c28210	0.89	+0.3
2,946,860	-		PGA1_c28210	0.89	+1.2
2,946,860	-		PGA1_c28210	0.89	-0.4
2,946,860	-		PGA1_c28210	0.89	+2.4
2,946,860	-		PGA1_c28210	0.89	-0.3
2,946,860	-		PGA1_c28210	0.89	+1.4
2,946,860	-		PGA1_c28210	0.89	+0.8
2,946,860	-		PGA1_c28210	0.89	+0.5
2,946,860	-		PGA1_c28210	0.89	-2.8
2,946,862	-		PGA1_c28210	0.90	-0.3
2,946,864	+				+1.1
2,946,867	+				+2.4
2,946,876	+				-0.1
2,946,877	+				-0.5
2,946,877	+				+0.8
2,946,877	+				-0.4
2,946,878	+				-1.4
2,946,884	-				+2.0
2,946,914	-				+0.9
2,946,924	+				-0.8
2,946,924	+				+1.3
2,946,924	+				-0.3
2,946,924	+				+1.4
2,946,924	+				-0.3
2,946,924	+				+1.8
2,946,924	+				-0.9
2,946,926	+				-1.9
2,946,926	-				-2.9
2,946,929	-				-1.5
2,946,932	-				+0.2
2,946,932	-				-0.6
2,946,932	-				-0.2
2,946,932	-				-0.6
2,946,936	+				+0.1
2,946,936	+				-0.7
2,946,936	+				+1.5
2,946,936	+				-0.9
2,946,936	+				-0.1
2,946,936	+				+0.2
2,946,936	+				+0.2
2,946,936	+				+0.3
2,946,936	+				-0.0
2,946,936	+				-0.6
2,946,936	+				+0.8
2,946,936	+				+0.4
2,946,939	-				+0.1
2,946,939	-				+1.0
2,946,939	-				+0.1
2,946,939	-				-0.9
2,946,939	-				+0.0
2,946,944	-				+0.8
2,946,944	-				-0.5
2,946,944	-				+1.1
2,946,944	-				+0.4
2,946,944	-				-1.2
2,946,944	-				+0.3
2,946,944	-				-0.0
2,946,944	-				+1.1
2,946,944	-				-1.0
2,946,944	-				-0.6
2,946,944	-				-1.1
2,946,947	+				+0.6
2,946,967	+				+0.4
2,946,975	-				-0.6
2,946,994	+				-1.2
2,947,012	-				+1.1
2,947,012	-				-0.4
2,947,012	-				+0.0
2,947,012	-				-1.9
2,947,018	-				+0.1
2,947,018	-				+0.2
2,947,024	+		PGA1_c28220	0.11	-0.9
2,947,024	+		PGA1_c28220	0.11	+0.4
2,947,024	+		PGA1_c28220	0.11	-0.5
2,947,024	+		PGA1_c28220	0.11	+0.7
2,947,024	+		PGA1_c28220	0.11	-1.4
2,947,024	+		PGA1_c28220	0.11	+3.0
2,947,024	+		PGA1_c28220	0.11	-0.5
2,947,029	+		PGA1_c28220	0.11	+2.1
2,947,032	-		PGA1_c28220	0.12	+1.0
2,947,032	-		PGA1_c28220	0.12	-0.5
2,947,032	-		PGA1_c28220	0.12	+0.4
2,947,032	-		PGA1_c28220	0.12	+1.3
2,947,032	-		PGA1_c28220	0.12	-0.6
2,947,032	-		PGA1_c28220	0.12	+0.4
2,947,032	-		PGA1_c28220	0.12	+0.8
2,947,032	-		PGA1_c28220	0.12	-2.1
2,947,041	-		PGA1_c28220	0.13	+0.2
2,947,050	+		PGA1_c28220	0.14	-0.3
2,947,065	-		PGA1_c28220	0.16	+0.4
2,947,067	+		PGA1_c28220	0.17	+0.3
2,947,067	+		PGA1_c28220	0.17	-0.6
2,947,067	+		PGA1_c28220	0.17	+0.2
2,947,067	+		PGA1_c28220	0.17	+1.0
2,947,067	+		PGA1_c28220	0.17	+0.8
2,947,067	+		PGA1_c28220	0.17	+0.4
2,947,067	+		PGA1_c28220	0.17	+0.2
2,947,067	+		PGA1_c28220	0.17	-0.6
2,947,075	-		PGA1_c28220	0.18	+0.7
2,947,075	-		PGA1_c28220	0.18	-0.1
2,947,075	-		PGA1_c28220	0.18	-1.7
2,947,075	-		PGA1_c28220	0.18	-0.6
2,947,075	-		PGA1_c28220	0.18	+0.7
2,947,075	-		PGA1_c28220	0.18	+0.7
2,947,075	-		PGA1_c28220	0.18	+1.0
2,947,075	-		PGA1_c28220	0.18	-1.6
2,947,075	-		PGA1_c28220	0.18	-0.4
2,947,075	-		PGA1_c28220	0.18	+0.5
2,947,075	-		PGA1_c28220	0.18	+0.8
2,947,075	-		PGA1_c28220	0.18	-1.9
2,947,075	-		PGA1_c28220	0.18	+0.6
2,947,077	+		PGA1_c28220	0.18	+0.4
2,947,077	+		PGA1_c28220	0.18	-0.7
2,947,077	+		PGA1_c28220	0.18	-1.2
2,947,077	+		PGA1_c28220	0.18	+0.6
2,947,077	+		PGA1_c28220	0.18	-1.5
2,947,077	+		PGA1_c28220	0.18	-1.4
2,947,080	-		PGA1_c28220	0.19	+1.2
2,947,080	-		PGA1_c28220	0.19	+0.2
2,947,083	-		PGA1_c28220	0.19	+0.6
2,947,083	-		PGA1_c28220	0.19	-0.9
2,947,084	-		PGA1_c28220	0.19	-1.1
2,947,085	+		PGA1_c28220	0.19	+0.1
2,947,085	+		PGA1_c28220	0.19	+1.4
2,947,085	-		PGA1_c28220	0.19	+0.5
2,947,085	-		PGA1_c28220	0.19	+1.0
2,947,085	-		PGA1_c28220	0.19	+2.4
2,947,085	-		PGA1_c28220	0.19	+0.8
2,947,085	-		PGA1_c28220	0.19	-0.0
2,947,085	-		PGA1_c28220	0.19	-1.5
2,947,085	-		PGA1_c28220	0.19	-0.8
2,947,085	-		PGA1_c28220	0.19	+0.7
2,947,085	-		PGA1_c28220	0.19	+1.3
2,947,093	-		PGA1_c28220	0.20	-2.2
2,947,095	+		PGA1_c28220	0.21	-0.6
2,947,095	+		PGA1_c28220	0.21	-0.8
2,947,102	+		PGA1_c28220	0.22	+2.0
2,947,103	+		PGA1_c28220	0.22	-0.8
2,947,108	+		PGA1_c28220	0.23	-0.0
2,947,110	-		PGA1_c28220	0.23	+0.6
2,947,110	-		PGA1_c28220	0.23	+1.4
2,947,113	+		PGA1_c28220	0.23	+1.0
2,947,116	-		PGA1_c28220	0.24	+0.5
2,947,121	-		PGA1_c28220	0.24	+1.4
2,947,121	-		PGA1_c28220	0.24	-0.4
2,947,130	-		PGA1_c28220	0.26	+1.4
2,947,130	-		PGA1_c28220	0.26	-0.0
2,947,130	-		PGA1_c28220	0.26	-0.6
2,947,132	+		PGA1_c28220	0.26	-0.2
2,947,140	-		PGA1_c28220	0.27	+1.3
2,947,175	+		PGA1_c28220	0.32	+0.4
2,947,212	+		PGA1_c28220	0.37	+0.1
2,947,212	+		PGA1_c28220	0.37	+0.4
2,947,212	+		PGA1_c28220	0.37	+2.3
2,947,212	+		PGA1_c28220	0.37	+0.1
2,947,212	+		PGA1_c28220	0.37	-2.6
2,947,212	+		PGA1_c28220	0.37	-2.1
2,947,212	+		PGA1_c28220	0.37	+0.3
2,947,217	+		PGA1_c28220	0.38	+1.2
2,947,217	+		PGA1_c28220	0.38	-0.0
2,947,217	+		PGA1_c28220	0.38	-0.3
2,947,217	+		PGA1_c28220	0.38	-0.2
2,947,217	+		PGA1_c28220	0.38	+0.2
2,947,217	+		PGA1_c28220	0.38	+0.1
2,947,220	-		PGA1_c28220	0.38	+0.6
2,947,220	-		PGA1_c28220	0.38	+1.6
2,947,220	-		PGA1_c28220	0.38	-1.9
2,947,225	-		PGA1_c28220	0.39	-0.9
2,947,225	-		PGA1_c28220	0.39	+3.0
2,947,225	-		PGA1_c28220	0.39	+0.9
2,947,225	-		PGA1_c28220	0.39	+0.1
2,947,225	-		PGA1_c28220	0.39	-1.2
2,947,225	-		PGA1_c28220	0.39	+0.2
2,947,225	-		PGA1_c28220	0.39	-0.6
2,947,225	-		PGA1_c28220	0.39	+1.4
2,947,225	-		PGA1_c28220	0.39	-0.7
2,947,225	-		PGA1_c28220	0.39	-0.4
2,947,231	+		PGA1_c28220	0.40	+0.5
2,947,233	+		PGA1_c28220	0.40	-0.4
2,947,238	+		PGA1_c28220	0.41	+0.7
2,947,246	-		PGA1_c28220	0.42	-0.4
2,947,246	-		PGA1_c28220	0.42	+0.4
2,947,246	-		PGA1_c28220	0.42	+0.9
2,947,253	+		PGA1_c28220	0.43	-0.0
2,947,253	+		PGA1_c28220	0.43	+1.6
2,947,257	+		PGA1_c28220	0.44	-0.6