Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2557 and HP15_2558 overlap by 23 nucleotides HP15_2558 and HP15_2559 are separated by 13 nucleotides HP15_2559 and HP15_2560 are separated by 171 nucleotides
HP15_2557: HP15_2557 - alpha/beta hydrolase fold-3 domain protein, at 2,703,784 to 2,704,677
_2557
HP15_2558: HP15_2558 - putative nuclease, at 2,704,655 to 2,704,909
_2558
HP15_2559: HP15_2559 - membrane protein containing DUF6, transmembrane, at 2,704,923 to 2,705,828
_2559
HP15_2560: HP15_2560 - TRAP dicarboxylate transporter- DctP subunit, at 2,706,000 to 2,707,103
_2560
Position (kb)
2704
2705
2706 Strain fitness (log2 ratio)
-1
0
1
2 at 2703.923 kb on - strand, within HP15_2557 at 2704.021 kb on + strand, within HP15_2557 at 2704.050 kb on - strand, within HP15_2557 at 2704.313 kb on + strand, within HP15_2557 at 2704.313 kb on + strand, within HP15_2557 at 2704.313 kb on + strand, within HP15_2557 at 2704.321 kb on - strand, within HP15_2557 at 2704.321 kb on - strand, within HP15_2557 at 2704.462 kb on + strand, within HP15_2557 at 2704.472 kb on + strand, within HP15_2557 at 2704.484 kb on - strand, within HP15_2557 at 2704.560 kb on + strand, within HP15_2557 at 2704.567 kb on + strand, within HP15_2557 at 2704.691 kb on - strand, within HP15_2558 at 2704.691 kb on - strand, within HP15_2558 at 2704.701 kb on + strand, within HP15_2558 at 2704.939 kb on - strand at 2705.024 kb on - strand, within HP15_2559 at 2705.029 kb on - strand, within HP15_2559 at 2705.034 kb on - strand, within HP15_2559 at 2705.086 kb on + strand, within HP15_2559 at 2705.162 kb on + strand, within HP15_2559 at 2705.306 kb on + strand, within HP15_2559 at 2705.323 kb on + strand, within HP15_2559 at 2705.351 kb on + strand, within HP15_2559 at 2705.390 kb on - strand, within HP15_2559 at 2705.430 kb on + strand, within HP15_2559 at 2705.493 kb on + strand, within HP15_2559 at 2705.512 kb on + strand, within HP15_2559 at 2705.587 kb on + strand, within HP15_2559 at 2705.668 kb on - strand, within HP15_2559 at 2705.778 kb on + strand at 2705.786 kb on - strand at 2705.931 kb on - strand at 2706.059 kb on - strand at 2706.085 kb on - strand at 2706.127 kb on + strand, within HP15_2560 at 2706.306 kb on + strand, within HP15_2560 at 2706.379 kb on - strand, within HP15_2560 at 2706.419 kb on - strand, within HP15_2560 at 2706.421 kb on + strand, within HP15_2560 at 2706.429 kb on - strand, within HP15_2560 at 2706.502 kb on - strand, within HP15_2560 at 2706.564 kb on + strand, within HP15_2560 at 2706.592 kb on + strand, within HP15_2560 at 2706.607 kb on + strand, within HP15_2560 at 2706.646 kb on - strand, within HP15_2560 at 2706.667 kb on - strand, within HP15_2560 at 2706.720 kb on + strand, within HP15_2560 at 2706.728 kb on - strand, within HP15_2560 at 2706.728 kb on - strand, within HP15_2560 at 2706.738 kb on - strand, within HP15_2560
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 2,703,923 - HP15_2557 0.16 +0.4 2,704,021 + HP15_2557 0.27 -0.6 2,704,050 - HP15_2557 0.30 +1.2 2,704,313 + HP15_2557 0.59 +0.0 2,704,313 + HP15_2557 0.59 -0.4 2,704,313 + HP15_2557 0.59 -0.3 2,704,321 - HP15_2557 0.60 -0.2 2,704,321 - HP15_2557 0.60 +1.0 2,704,462 + HP15_2557 0.76 -1.4 2,704,472 + HP15_2557 0.77 -0.7 2,704,484 - HP15_2557 0.78 -0.2 2,704,560 + HP15_2557 0.87 -0.2 2,704,567 + HP15_2557 0.88 -0.1 2,704,691 - HP15_2558 0.14 -0.9 2,704,691 - HP15_2558 0.14 +0.6 2,704,701 + HP15_2558 0.18 -0.5 2,704,939 - +0.3 2,705,024 - HP15_2559 0.11 +0.7 2,705,029 - HP15_2559 0.12 +1.2 2,705,034 - HP15_2559 0.12 +0.5 2,705,086 + HP15_2559 0.18 -0.1 2,705,162 + HP15_2559 0.26 +0.6 2,705,306 + HP15_2559 0.42 +0.3 2,705,323 + HP15_2559 0.44 +0.7 2,705,351 + HP15_2559 0.47 +0.0 2,705,390 - HP15_2559 0.52 +1.2 2,705,430 + HP15_2559 0.56 -0.0 2,705,493 + HP15_2559 0.63 -0.2 2,705,512 + HP15_2559 0.65 -0.2 2,705,587 + HP15_2559 0.73 +0.2 2,705,668 - HP15_2559 0.82 +0.9 2,705,778 + +0.4 2,705,786 - -0.5 2,705,931 - -1.4 2,706,059 - +0.2 2,706,085 - -0.1 2,706,127 + HP15_2560 0.12 +0.4 2,706,306 + HP15_2560 0.28 -0.3 2,706,379 - HP15_2560 0.34 -0.8 2,706,419 - HP15_2560 0.38 +0.6 2,706,421 + HP15_2560 0.38 -1.0 2,706,429 - HP15_2560 0.39 +0.0 2,706,502 - HP15_2560 0.45 -0.5 2,706,564 + HP15_2560 0.51 +0.6 2,706,592 + HP15_2560 0.54 -0.2 2,706,607 + HP15_2560 0.55 -0.2 2,706,646 - HP15_2560 0.59 -0.5 2,706,667 - HP15_2560 0.60 -0.2 2,706,720 + HP15_2560 0.65 +1.9 2,706,728 - HP15_2560 0.66 -0.7 2,706,728 - HP15_2560 0.66 -0.6 2,706,738 - HP15_2560 0.67 +0.0
Or see this region's nucleotide sequence