Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2079

Experiment: D-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (N)
2,208,151	+				+0.2
2,208,152	-				+0.6
2,208,152	-				+0.2
2,208,154	+				-0.7
2,208,155	-				+0.5
2,208,227	+				+0.4
2,208,563	-		Psest_2078	0.37	+0.0
2,208,642	+		Psest_2078	0.46	-0.1
2,208,642	+		Psest_2078	0.46	+0.7
2,208,642	+		Psest_2078	0.46	+0.3
2,208,642	+		Psest_2078	0.46	-0.1
2,208,643	-		Psest_2078	0.46	-0.2
2,208,643	-		Psest_2078	0.46	+0.8
2,208,643	-		Psest_2078	0.46	+0.4
2,208,643	-		Psest_2078	0.46	-0.0
2,208,669	+		Psest_2078	0.49	-2.0
2,208,697	+		Psest_2078	0.53	-0.2
2,208,841	+		Psest_2078	0.70	-0.1
2,208,861	+		Psest_2078	0.73	+0.3
2,208,861	+		Psest_2078	0.73	+0.3
2,208,861	+		Psest_2078	0.73	-1.4
2,208,861	+		Psest_2078	0.73	-0.1
2,208,861	+		Psest_2078	0.73	+0.4
2,208,861	+		Psest_2078	0.73	+0.6
2,208,861	+		Psest_2078	0.73	+0.5
2,208,861	+		Psest_2078	0.73	+0.0
2,209,033	+				-0.6
2,209,041	+				-0.4
2,209,042	-				-1.8
2,209,224	+		Psest_2079	0.21	-1.4
2,209,224	+		Psest_2079	0.21	-1.1
2,209,225	-		Psest_2079	0.22	-0.7
2,209,225	-		Psest_2079	0.22	-3.2
2,209,225	-		Psest_2079	0.22	-1.0
2,209,381	+		Psest_2079	0.41	-0.5
2,209,381	+		Psest_2079	0.41	-1.3
2,209,381	+		Psest_2079	0.41	-2.5
2,209,477	+		Psest_2079	0.54	-1.0
2,209,477	+		Psest_2079	0.54	-0.7
2,209,477	+		Psest_2079	0.54	-1.1
2,209,477	+		Psest_2079	0.54	-1.0
2,209,477	+		Psest_2079	0.54	-0.0
2,209,477	+		Psest_2079	0.54	+0.1
2,209,477	+		Psest_2079	0.54	-1.6
2,209,478	-		Psest_2079	0.54	-0.4
2,209,478	-		Psest_2079	0.54	-0.9
2,209,478	-		Psest_2079	0.54	-1.2
2,209,478	-		Psest_2079	0.54	-0.6
2,209,478	-		Psest_2079	0.54	-1.2
2,209,478	-		Psest_2079	0.54	-1.6
2,209,478	-		Psest_2079	0.54	-2.9
2,209,478	-		Psest_2079	0.54	-1.1
2,209,478	-		Psest_2079	0.54	-0.8
2,209,478	-		Psest_2079	0.54	+0.2
2,209,478	-		Psest_2079	0.54	-0.6
2,209,479	+		Psest_2079	0.54	-1.1
2,209,479	+		Psest_2079	0.54	-0.7
2,209,479	+		Psest_2079	0.54	-1.4
2,209,479	+		Psest_2079	0.54	-1.0
2,209,479	+		Psest_2079	0.54	-2.5
2,209,479	+		Psest_2079	0.54	-0.8
2,209,479	+		Psest_2079	0.54	-1.0
2,209,479	+		Psest_2079	0.54	-0.5
2,209,479	+		Psest_2079	0.54	-0.6
2,209,479	+		Psest_2079	0.54	-1.1
2,209,479	+		Psest_2079	0.54	-0.9
2,209,480	-		Psest_2079	0.54	-2.3
2,209,480	-		Psest_2079	0.54	-1.8
2,209,480	-		Psest_2079	0.54	-1.7
2,209,480	-		Psest_2079	0.54	-1.9
2,209,480	-		Psest_2079	0.54	-1.4
2,209,480	-		Psest_2079	0.54	-0.6
2,209,480	-		Psest_2079	0.54	-1.2
2,209,480	-		Psest_2079	0.54	-1.9
2,209,480	-		Psest_2079	0.54	-0.6
2,209,480	-		Psest_2079	0.54	-0.7
2,209,480	-		Psest_2079	0.54	-1.4
2,209,480	-		Psest_2079	0.54	-1.8
2,209,480	-		Psest_2079	0.54	-1.2
2,209,480	-		Psest_2079	0.54	-0.1
2,209,480	-		Psest_2079	0.54	-0.6
2,209,480	-		Psest_2079	0.54	-0.6
2,209,481	+		Psest_2079	0.54	-1.6
2,209,481	+		Psest_2079	0.54	-0.4
2,209,482	-		Psest_2079	0.54	-1.5
2,209,482	-		Psest_2079	0.54	-2.9
2,209,557	+		Psest_2079	0.64	-0.9
2,209,558	-		Psest_2079	0.64	-1.0
2,209,558	-		Psest_2079	0.64	-1.4
2,209,615	-		Psest_2079	0.71	-1.0
2,209,628	-		Psest_2079	0.73	-0.2
2,209,628	-		Psest_2079	0.73	-0.6
2,209,634	+		Psest_2079	0.74	-0.3
2,209,634	+		Psest_2079	0.74	-2.8
2,209,636	+		Psest_2079	0.74	-0.3
2,209,636	+		Psest_2079	0.74	-1.1
2,209,636	+		Psest_2079	0.74	-0.6
2,209,636	+		Psest_2079	0.74	-1.0
2,209,668	+		Psest_2079	0.78	-1.1
2,209,668	+		Psest_2079	0.78	-1.3
2,209,668	+		Psest_2079	0.78	-0.9
2,209,669	-		Psest_2079	0.78	-3.3
2,209,887	+				-1.2
2,209,887	+				+0.5
2,209,887	+				+1.3
2,209,887	+				+0.4
2,209,888	-				+0.4
2,210,033	+				-0.1
2,210,110	+		Psest_2080	0.12	-1.0
2,210,207	+		Psest_2080	0.27	+0.1
2,210,207	+		Psest_2080	0.27	-0.3
2,210,207	+		Psest_2080	0.27	-0.8
2,210,208	-		Psest_2080	0.27	+0.1
2,210,211	+		Psest_2080	0.27	-0.7
2,210,211	+		Psest_2080	0.27	-0.2
2,210,211	+		Psest_2080	0.27	+1.0
2,210,211	+		Psest_2080	0.27	+0.6
2,210,211	+		Psest_2080	0.27	+0.1
2,210,211	+		Psest_2080	0.27	+0.8
2,210,211	+		Psest_2080	0.27	-0.5
2,210,211	+		Psest_2080	0.27	+0.1
2,210,211	+		Psest_2080	0.27	-0.3
2,210,212	-		Psest_2080	0.27	+0.2
2,210,212	-		Psest_2080	0.27	-1.0
2,210,354	+		Psest_2080	0.49	+0.3
2,210,354	+		Psest_2080	0.49	+0.9
2,210,354	+		Psest_2080	0.49	-0.6
2,210,354	+		Psest_2080	0.49	-0.2
2,210,354	+		Psest_2080	0.49	-1.3
2,210,354	+		Psest_2080	0.49	+0.1
2,210,354	+		Psest_2080	0.49	-1.3
2,210,354	+		Psest_2080	0.49	+0.0
2,210,354	+		Psest_2080	0.49	+0.2
2,210,354	+		Psest_2080	0.49	+0.7
2,210,354	+		Psest_2080	0.49	-0.1
2,210,354	+		Psest_2080	0.49	+0.4
2,210,354	+		Psest_2080	0.49	+0.6
2,210,354	+		Psest_2080	0.49	-0.7
2,210,355	-		Psest_2080	0.50	+0.4
2,210,355	-		Psest_2080	0.50	-0.7
2,210,355	-		Psest_2080	0.50	-0.7
2,210,355	-		Psest_2080	0.50	-1.3
2,210,355	-		Psest_2080	0.50	+0.2
2,210,574	+		Psest_2080	0.83	+0.2
2,210,574	+		Psest_2080	0.83	+0.2
2,210,575	-		Psest_2080	0.83	-0.2
2,210,575	-		Psest_2080	0.83	+0.3
2,210,575	-		Psest_2080	0.83	+0.5
2,210,575	-		Psest_2080	0.83	-1.3
2,210,601	+		Psest_2080	0.88	+0.4
2,210,601	+		Psest_2080	0.88	+0.8
2,210,601	+		Psest_2080	0.88	-0.5
2,210,601	+		Psest_2080	0.88	-0.3
2,210,601	+		Psest_2080	0.88	+0.2
2,210,601	+		Psest_2080	0.88	+0.5
2,210,601	+		Psest_2080	0.88	+0.1
2,210,601	+		Psest_2080	0.88	+0.1
2,210,601	+		Psest_2080	0.88	-0.8
2,210,601	+		Psest_2080	0.88	-0.6
2,210,601	+		Psest_2080	0.88	+0.7
2,210,601	+		Psest_2080	0.88	+0.3
2,210,601	+		Psest_2080	0.88	-0.3
2,210,601	+		Psest_2080	0.88	+0.7
2,210,602	-		Psest_2080	0.88	+0.2
2,210,602	-		Psest_2080	0.88	+0.1
2,210,602	-		Psest_2080	0.88	+0.2
2,210,608	+		Psest_2080	0.89	-0.1
2,210,608	+		Psest_2080	0.89	-0.3
2,210,608	+		Psest_2080	0.89	-0.6
2,210,608	+		Psest_2080	0.89	+0.8
2,210,609	-		Psest_2080	0.89	+0.2
2,210,787	+				-0.5
2,210,787	+				+0.3
2,210,788	-				+0.0
2,210,789	+				-1.0
2,210,789	+				+0.3
2,210,790	-				-0.2
2,210,790	-				+0.7
2,210,793	+				-3.0
2,210,793	+				+0.3
2,210,793	+				-0.4
2,210,794	-				+0.3
2,210,794	-				+0.1
2,210,794	-				+1.3
2,210,813	+				-0.6