Strain Fitness in Marinobacter adhaerens HP15 around HP15_404

Experiment: m.b. Chlorite 0.16 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_402 and HP15_403 are separated by 135 nucleotidesHP15_403 and HP15_404 are separated by 80 nucleotidesHP15_404 and HP15_405 are separated by 90 nucleotidesHP15_405 and HP15_406 are separated by 202 nucleotides HP15_402: HP15_402 - ribosomal protein S11, bacterial-type, at 397,233 to 397,589 _402 HP15_403: HP15_403 - 30S ribosomal protein S4, at 397,725 to 398,228 _403 HP15_404: HP15_404 - DNA-directed RNA polymerase subunit alpha, at 398,309 to 399,268 _404 HP15_405: HP15_405 - ribosomal protein L17, at 399,359 to 399,700 _405 HP15_406: HP15_406 - excinuclease ABC, ATPase subunit (A), at 399,903 to 402,743 _406 Position (kb) 398 399 400Strain fitness (log2 ratio) -1 0 1at 400.060 kb on + strandat 400.060 kb on + strandat 400.158 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 0.16 mM
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400,060 + -0.0
400,060 + +0.8
400,158 - -0.7

Or see this region's nucleotide sequence