Experiment: m.b. Chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3829 and HP15_tRNA51 are separated by 69 nucleotides HP15_tRNA51 and HP15_3830 are separated by 24 nucleotides HP15_3830 and HP15_3831 are separated by 246 nucleotides HP15_3831 and HP15_3832 are separated by 87 nucleotides
HP15_3829: HP15_3829 - sodium/hydrogen exchanger, at 4,054,931 to 4,056,655
_3829
HP15_tRNA51: HP15_tRNA51 - tRNA-Gly, at 4,056,725 to 4,056,798
_tRNA51
HP15_3830: HP15_3830 - FAD-dependent pyridine nucleotide-disulfide oxidoreductase, at 4,056,823 to 4,058,133
_3830
HP15_3831: HP15_3831 - transcriptional regulator, TetR family protein, at 4,058,380 to 4,058,985
_3831
HP15_3832: HP15_3832 - hypothetical protein, at 4,059,073 to 4,059,657
_3832
Position (kb)
4056
4057
4058
4059 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4055.830 kb on - strand, within HP15_3829 at 4055.999 kb on - strand, within HP15_3829 at 4056.103 kb on - strand, within HP15_3829 at 4056.103 kb on - strand, within HP15_3829 at 4056.207 kb on + strand, within HP15_3829 at 4056.215 kb on - strand, within HP15_3829 at 4056.247 kb on - strand, within HP15_3829 at 4056.322 kb on - strand, within HP15_3829 at 4056.343 kb on - strand, within HP15_3829 at 4056.343 kb on - strand, within HP15_3829 at 4056.343 kb on - strand, within HP15_3829 at 4056.343 kb on - strand, within HP15_3829 at 4056.369 kb on + strand, within HP15_3829 at 4056.369 kb on + strand, within HP15_3829 at 4056.383 kb on - strand, within HP15_3829 at 4056.446 kb on - strand, within HP15_3829 at 4056.599 kb on + strand at 4056.601 kb on + strand at 4056.609 kb on - strand at 4056.609 kb on - strand at 4056.614 kb on - strand at 4056.807 kb on - strand at 4056.909 kb on - strand at 4056.909 kb on - strand at 4056.936 kb on + strand at 4056.944 kb on - strand at 4057.073 kb on + strand, within HP15_3830 at 4057.097 kb on + strand, within HP15_3830 at 4057.105 kb on - strand, within HP15_3830 at 4057.105 kb on - strand, within HP15_3830 at 4057.130 kb on + strand, within HP15_3830 at 4057.138 kb on - strand, within HP15_3830 at 4057.138 kb on - strand, within HP15_3830 at 4057.263 kb on + strand, within HP15_3830 at 4057.263 kb on + strand, within HP15_3830 at 4057.271 kb on - strand, within HP15_3830 at 4057.271 kb on - strand, within HP15_3830 at 4057.299 kb on - strand, within HP15_3830 at 4057.321 kb on - strand, within HP15_3830 at 4057.372 kb on - strand, within HP15_3830 at 4057.516 kb on - strand, within HP15_3830 at 4057.524 kb on + strand, within HP15_3830 at 4057.578 kb on + strand, within HP15_3830 at 4057.634 kb on - strand, within HP15_3830 at 4057.701 kb on + strand, within HP15_3830 at 4057.709 kb on - strand, within HP15_3830 at 4057.709 kb on - strand, within HP15_3830 at 4057.771 kb on - strand, within HP15_3830 at 4057.811 kb on + strand, within HP15_3830 at 4057.818 kb on + strand, within HP15_3830 at 4057.831 kb on - strand, within HP15_3830 at 4058.079 kb on - strand at 4058.123 kb on + strand at 4058.137 kb on + strand at 4058.145 kb on - strand at 4058.145 kb on - strand at 4058.245 kb on + strand at 4058.245 kb on + strand at 4058.335 kb on + strand at 4058.343 kb on - strand at 4058.480 kb on + strand, within HP15_3831 at 4058.528 kb on + strand, within HP15_3831 at 4058.569 kb on + strand, within HP15_3831 at 4058.611 kb on - strand, within HP15_3831 at 4058.736 kb on - strand, within HP15_3831 at 4058.759 kb on + strand, within HP15_3831 at 4058.788 kb on + strand, within HP15_3831 at 4058.793 kb on + strand, within HP15_3831 at 4058.892 kb on + strand, within HP15_3831
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.16 mM remove 4,055,830 - HP15_3829 0.52 -0.3 4,055,999 - HP15_3829 0.62 -0.4 4,056,103 - HP15_3829 0.68 +0.8 4,056,103 - HP15_3829 0.68 -1.9 4,056,207 + HP15_3829 0.74 +0.6 4,056,215 - HP15_3829 0.74 +0.1 4,056,247 - HP15_3829 0.76 -0.6 4,056,322 - HP15_3829 0.81 -0.2 4,056,343 - HP15_3829 0.82 +0.8 4,056,343 - HP15_3829 0.82 +0.9 4,056,343 - HP15_3829 0.82 -0.4 4,056,343 - HP15_3829 0.82 -1.1 4,056,369 + HP15_3829 0.83 -0.6 4,056,369 + HP15_3829 0.83 -0.7 4,056,383 - HP15_3829 0.84 +0.3 4,056,446 - HP15_3829 0.88 +0.2 4,056,599 + -0.4 4,056,601 + -0.7 4,056,609 - +0.2 4,056,609 - -0.2 4,056,614 - +0.6 4,056,807 - -0.1 4,056,909 - -0.6 4,056,909 - +0.9 4,056,936 + +0.9 4,056,944 - -1.0 4,057,073 + HP15_3830 0.19 +1.9 4,057,097 + HP15_3830 0.21 +0.4 4,057,105 - HP15_3830 0.22 -0.2 4,057,105 - HP15_3830 0.22 +0.4 4,057,130 + HP15_3830 0.23 +0.6 4,057,138 - HP15_3830 0.24 -0.2 4,057,138 - HP15_3830 0.24 -0.5 4,057,263 + HP15_3830 0.34 +0.8 4,057,263 + HP15_3830 0.34 -0.3 4,057,271 - HP15_3830 0.34 -0.8 4,057,271 - HP15_3830 0.34 +1.1 4,057,299 - HP15_3830 0.36 +0.1 4,057,321 - HP15_3830 0.38 +0.1 4,057,372 - HP15_3830 0.42 +0.2 4,057,516 - HP15_3830 0.53 -0.2 4,057,524 + HP15_3830 0.53 -1.9 4,057,578 + HP15_3830 0.58 -0.1 4,057,634 - HP15_3830 0.62 +0.8 4,057,701 + HP15_3830 0.67 +0.8 4,057,709 - HP15_3830 0.68 -0.5 4,057,709 - HP15_3830 0.68 +0.1 4,057,771 - HP15_3830 0.72 -1.1 4,057,811 + HP15_3830 0.75 +0.0 4,057,818 + HP15_3830 0.76 -0.2 4,057,831 - HP15_3830 0.77 -1.0 4,058,079 - +0.5 4,058,123 + +0.1 4,058,137 + -0.4 4,058,145 - +0.1 4,058,145 - +0.5 4,058,245 + -0.0 4,058,245 + +0.4 4,058,335 + +0.8 4,058,343 - +0.0 4,058,480 + HP15_3831 0.17 +0.3 4,058,528 + HP15_3831 0.24 -1.4 4,058,569 + HP15_3831 0.31 -0.3 4,058,611 - HP15_3831 0.38 +0.4 4,058,736 - HP15_3831 0.59 +1.0 4,058,759 + HP15_3831 0.63 +0.3 4,058,788 + HP15_3831 0.67 -0.1 4,058,793 + HP15_3831 0.68 +0.1 4,058,892 + HP15_3831 0.84 +0.5
Or see this region's nucleotide sequence