Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33880

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
3,551,594	-				+0.9
3,551,612	-				-0.3
3,551,708	+		PGA1_c33870	0.14	+1.4
3,551,789	+		PGA1_c33870	0.22	+0.6
3,551,813	+		PGA1_c33870	0.24	+0.7
3,551,829	+		PGA1_c33870	0.26	-0.8
3,551,832	-		PGA1_c33870	0.26	-2.2
3,551,854	+		PGA1_c33870	0.28	+0.9
3,551,923	-		PGA1_c33870	0.35	+0.0
3,551,952	+		PGA1_c33870	0.38	+0.3
3,551,952	+		PGA1_c33870	0.38	-0.4
3,551,952	+		PGA1_c33870	0.38	+0.3
3,551,960	-		PGA1_c33870	0.39	-0.2
3,551,962	+		PGA1_c33870	0.39	+0.1
3,551,962	+		PGA1_c33870	0.39	+0.4
3,551,962	+		PGA1_c33870	0.39	-0.9
3,551,970	-		PGA1_c33870	0.40	+0.8
3,552,054	+		PGA1_c33870	0.48	+1.0
3,552,105	-		PGA1_c33870	0.53	-1.5
3,552,156	-		PGA1_c33870	0.58	-0.2
3,552,156	-		PGA1_c33870	0.58	-0.8
3,552,175	-		PGA1_c33870	0.60	+0.4
3,552,203	+		PGA1_c33870	0.62	-0.3
3,552,245	+		PGA1_c33870	0.66	-0.5
3,552,253	-		PGA1_c33870	0.67	-0.1
3,552,346	-		PGA1_c33870	0.76	-0.1
3,552,403	+		PGA1_c33870	0.82	+1.4
3,552,478	+		PGA1_c33870	0.89	-1.4
3,552,485	+		PGA1_c33870	0.90	+0.9
3,552,495	+				-2.7
3,552,649	+				+0.7
3,552,668	+				-1.5
3,552,681	-				-2.3
3,552,713	+		PGA1_c33880	0.10	+0.7
3,552,726	-		PGA1_c33880	0.11	-0.6
3,552,732	+		PGA1_c33880	0.12	+0.8
3,552,740	-		PGA1_c33880	0.12	+0.5
3,552,740	-		PGA1_c33880	0.12	+0.5
3,552,787	-		PGA1_c33880	0.16	+1.6
3,552,787	-		PGA1_c33880	0.16	+0.2
3,552,787	-		PGA1_c33880	0.16	+0.7
3,552,822	+		PGA1_c33880	0.19	+4.2
3,552,834	+		PGA1_c33880	0.20	+0.3
3,552,842	-		PGA1_c33880	0.21	-0.9
3,552,857	+		PGA1_c33880	0.22	+0.3
3,552,865	-		PGA1_c33880	0.22	+0.3
3,552,979	+		PGA1_c33880	0.32	-0.4
3,553,011	+		PGA1_c33880	0.34	+1.1
3,553,016	+		PGA1_c33880	0.35	-0.3
3,553,016	+		PGA1_c33880	0.35	+0.1
3,553,016	+		PGA1_c33880	0.35	+1.3
3,553,024	-		PGA1_c33880	0.35	+0.1
3,553,180	+		PGA1_c33880	0.48	-1.1
3,553,192	+		PGA1_c33880	0.49	+0.4
3,553,193	-		PGA1_c33880	0.49	+0.1
3,553,211	-		PGA1_c33880	0.51	+0.6
3,553,276	-		PGA1_c33880	0.56	+0.7
3,553,407	-		PGA1_c33880	0.67	+0.1
3,553,593	+		PGA1_c33880	0.82	+0.9
3,553,601	-		PGA1_c33880	0.82	-1.1
3,553,626	+		PGA1_c33880	0.85	+0.6
3,553,633	-		PGA1_c33880	0.85	-0.6
3,553,672	-		PGA1_c33880	0.88	+0.6
3,553,693	-				+1.4
3,553,693	-				-0.4
3,553,707	+				+1.5
3,553,707	-				+0.0
3,553,744	+				-0.5
3,553,767	+				+0.2
3,553,800	+				-0.3
3,553,808	-				-0.7
3,553,808	-				-1.1
3,553,821	+				-2.1
3,553,821	+				-0.1
3,553,821	+				-1.9
3,553,829	-				+0.6
3,553,829	-				+0.1
3,553,854	+				-0.5
3,553,859	+				+1.5
3,553,898	+		PGA1_c33890	0.12	+0.0
3,553,898	+		PGA1_c33890	0.12	-2.2
3,553,898	+		PGA1_c33890	0.12	+1.2
3,553,898	+		PGA1_c33890	0.12	+1.2
3,554,032	-		PGA1_c33890	0.42	+0.4
3,554,046	-		PGA1_c33890	0.45	+1.1
3,554,055	+		PGA1_c33890	0.47	+0.4
3,554,083	+		PGA1_c33890	0.54	+1.9
3,554,089	+		PGA1_c33890	0.55	-0.9
3,554,125	-		PGA1_c33890	0.63	-1.8
3,554,239	+		PGA1_c33890	0.89	-1.3
3,554,242	-		PGA1_c33890	0.90	-0.1
3,554,242	-		PGA1_c33890	0.90	-0.2
3,554,256	-				+0.3
3,554,285	+				-0.3
3,554,301	-				+1.0
3,554,357	-				+0.5
3,554,442	+				+0.9
3,554,450	-				+0.4
3,554,450	-				-3.0
3,554,450	-				-1.8
3,554,460	-				-0.2
3,554,460	-				+0.9
3,554,460	-				-0.4
3,554,460	-				-0.5
3,554,460	-				-0.0
3,554,479	+				+0.1
3,554,479	+				+0.7
3,554,487	-				-0.7
3,554,487	-				+0.6
3,554,563	-		PGA1_c33900	0.12	+0.4
3,554,639	-		PGA1_c33900	0.17	-2.6
3,554,639	-		PGA1_c33900	0.17	+0.2
3,554,654	+		PGA1_c33900	0.18	-0.1
3,554,661	+		PGA1_c33900	0.18	+0.3
3,554,661	+		PGA1_c33900	0.18	-0.4
3,554,662	-		PGA1_c33900	0.18	+0.4
3,554,733	+		PGA1_c33900	0.23	+0.3
3,554,733	+		PGA1_c33900	0.23	-1.2
3,554,741	-		PGA1_c33900	0.24	-1.0
3,554,754	+		PGA1_c33900	0.25	+0.3
3,554,762	-		PGA1_c33900	0.25	+0.2